RNA–Protein interactions for RNA: ENST00000215917.11

SRRD-201, Transcript of SRR1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRD, Length 4,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-201ENST00000215917 URB2Q14146 1524 aaKnown RBP21.87■■□□□ 1.09
SRRD-201ENST00000215917 PDS5BQ9NTI5 1447 aa21.87■■□□□ 1.09
SRRD-201ENST00000215917 ARHGAP35Q9NRY4 1499 aa21.86■■□□□ 1.09
SRRD-201ENST00000215917 LAMC3Q9Y6N6 1575 aa21.83■■□□□ 1.09
SRRD-201ENST00000215917 ZNF316A6NFI3 1004 aaPredicted RBP21.78■■□□□ 1.08
SRRD-201ENST00000215917 NEFLP07196 543 aa21.78■■□□□ 1.08
SRRD-201ENST00000215917 ABCA10Q8WWZ4 1543 aa21.78■■□□□ 1.08
SRRD-201ENST00000215917 CNGB1Q14028 1251 aaPredicted RBP21.75■■□□□ 1.07
SRRD-201ENST00000215917 KIF21AQ7Z4S6 1674 aa21.71■■□□□ 1.07
SRRD-201ENST00000215917 FHOD3Q2V2M9 1422 aa21.7■■□□□ 1.06
SRRD-201ENST00000215917 GAPVD1Q14C86 1478 aa21.67■■□□□ 1.06
SRRD-201ENST00000215917 FAM50AQ14320 339 aaKnown RBP21.64■■□□□ 1.05
SRRD-201ENST00000215917 AQRO60306 1485 aaKnown RBP eCLIP21.63■■□□□ 1.05
SRRD-201ENST00000215917 ARID3CA6NKF2 412 aa21.58■■□□□ 1.05
SRRD-201ENST00000215917 MIER1Q8N108 512 aa21.56■■□□□ 1.04
SRRD-201ENST00000215917 CCNB3Q8WWL7 1395 aa21.53■■□□□ 1.04
SRRD-201ENST00000215917 ERCC6Q03468 1493 aa21.52■■□□□ 1.04
SRRD-201ENST00000215917 FHAD1B1AJZ9 1412 aa21.51■■□□□ 1.03
SRRD-201ENST00000215917 MRC2Q9UBG0 1479 aa21.51■■□□□ 1.03
SRRD-201ENST00000215917 FBLN2P98095 1184 aa21.5■■□□□ 1.03
SRRD-201ENST00000215917 CUL7Q14999 1698 aa21.49■■□□□ 1.03
SRRD-201ENST00000215917 ABCA5Q8WWZ7 1642 aa21.47■■□□□ 1.03
SRRD-201ENST00000215917 ZNF608Q9ULD9 1512 aaPredicted RBP21.47■■□□□ 1.03
SRRD-201ENST00000215917 PCF11O94913 1555 aaKnown RBP21.46■■□□□ 1.03
SRRD-201ENST00000215917 PHLDB1Q86UU1 1377 aa21.46■■□□□ 1.03
SRRD-201ENST00000215917 WDR97A6NE52 1622 aa21.46■■□□□ 1.03
SRRD-201ENST00000215917 TIAM1Q13009 1591 aa21.45■■□□□ 1.02
SRRD-201ENST00000215917 LRRC9Q6ZRR7 1453 aa21.44■■□□□ 1.02
SRRD-201ENST00000215917 TARBP1Q13395 1621 aaKnown RBP21.43■■□□□ 1.02
SRRD-201ENST00000215917 RRBP1Q9P2E9 1410 aaKnown RBP21.43■■□□□ 1.02
SRRD-201ENST00000215917 DHX57Q6P158 1386 aaKnown RBP21.39■■□□□ 1.01
SRRD-201ENST00000215917 MTUS2Q5JR59 1369 aa21.37■■□□□ 1.01
SRRD-201ENST00000215917 CTTNBP2Q8WZ74 1663 aa21.37■■□□□ 1.01
SRRD-201ENST00000215917 FMN1Q68DA7 1419 aa21.36■■□□□ 1.01
SRRD-201ENST00000215917 CASKIN1Q8WXD9 1431 aa21.35■■□□□ 1.01
SRRD-201ENST00000215917 EFCAB5A4FU69 1503 aa21.34■■□□□ 1.01
SRRD-201ENST00000215917 GRIN2BQ13224 1484 aa21.33■■□□□ 1
SRRD-201ENST00000215917 CHMP7Q8WUX9 453 aaPredicted RBP21.32■■□□□ 1
SRRD-201ENST00000215917 FYCO1Q9BQS8 1478 aa21.31■■□□□ 1
SRRD-201ENST00000215917 IFT140Q96RY7 1462 aa21.3■■□□□ 1
SRRD-201ENST00000215917 POLR3GLQ9BT43 218 aa21.29■■□□□ 1
SRRD-201ENST00000215917 SIN3AQ96ST3 1273 aa21.29■■□□□ 1
SRRD-201ENST00000215917 RAB3GAP2Q9H2M9 1393 aa21.29■■□□□ 1
SRRD-201ENST00000215917 PBRM1Q86U86 1689 aa21.26■□□□□ 0.99
SRRD-201ENST00000215917 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
SRRD-201ENST00000215917 FKBP8Q14318 412 aa21.26■□□□□ 0.99
SRRD-201ENST00000215917 MAP3K1Q13233 1512 aa21.26■□□□□ 0.99
SRRD-201ENST00000215917 HIRIP3Q9BW71 556 aaPredicted RBP21.25■□□□□ 0.99
SRRD-201ENST00000215917 WDR62O43379 1518 aa21.24■□□□□ 0.99
SRRD-201ENST00000215917 ADAMTS12P58397 1594 aa21.22■□□□□ 0.99
SRRD-201ENST00000215917 CHIC2Q9UKJ5 165 aa21.19■□□□□ 0.98
SRRD-201ENST00000215917 CFAP43Q8NDM7 1665 aa21.19■□□□□ 0.98
SRRD-201ENST00000215917 IQGAP2Q13576 1575 aa21.18■□□□□ 0.98
SRRD-201ENST00000215917 SAMD9Q5K651 1589 aa21.18■□□□□ 0.98
SRRD-201ENST00000215917 SETD5Q9C0A6 1442 aa21.18■□□□□ 0.98
SRRD-201ENST00000215917 CLSPNQ9HAW4 1339 aa21.17■□□□□ 0.98
SRRD-201ENST00000215917 EIF4G3O43432 1585 aaKnown RBP21.15■□□□□ 0.98
SRRD-201ENST00000215917 FGD6Q6ZV73 1430 aa21.13■□□□□ 0.97
SRRD-201ENST00000215917 TRIM52Q96A61 297 aa21.13■□□□□ 0.97
SRRD-201ENST00000215917 NCOA2Q15596 1464 aa21.12■□□□□ 0.97
SRRD-201ENST00000215917 CDK13Q14004 1512 aaKnown RBP21.11■□□□□ 0.97
SRRD-201ENST00000215917 RRP7BPQ9NSQ0 103 aa21.11■□□□□ 0.97
SRRD-201ENST00000215917 IRX6P78412 446 aaPredicted RBP21.1■□□□□ 0.97
SRRD-201ENST00000215917 GRIN2AQ12879 1464 aa21.1■□□□□ 0.97
SRRD-201ENST00000215917 DDX10Q13206 875 aaKnown RBP21.09■□□□□ 0.97
SRRD-201ENST00000215917 THOC2Q8NI27 1593 aaKnown RBP21.07■□□□□ 0.96
SRRD-201ENST00000215917 LRRIQ1Q96JM4 1722 aa21.07■□□□□ 0.96
SRRD-201ENST00000215917 KIAA0586Q9BVV6 1533 aa21.06■□□□□ 0.96
SRRD-201ENST00000215917 JPH4Q96JJ6 628 aa21.06■□□□□ 0.96
SRRD-201ENST00000215917 MAGI3Q5TCQ9 1506 aa21.05■□□□□ 0.96
SRRD-201ENST00000215917 EPRSP07814 1512 aaKnown RBP21.04■□□□□ 0.96
SRRD-201ENST00000215917 PTPRKQ15262 1439 aa21.04■□□□□ 0.96
SRRD-201ENST00000215917 MYOM3Q5VTT5 1437 aa21.04■□□□□ 0.96
SRRD-201ENST00000215917 BCL11AQ9H165 835 aa21.01■□□□□ 0.95
SRRD-201ENST00000215917 KCNH8Q96L42 1107 aa21.01■□□□□ 0.95
SRRD-201ENST00000215917 DISP1Q96F81 1524 aa21■□□□□ 0.95
SRRD-201ENST00000215917 ZNF777Q9ULD5 760 aaPredicted RBP20.99■□□□□ 0.95
SRRD-201ENST00000215917 SYNJ2O15056 1496 aa20.99■□□□□ 0.95
SRRD-201ENST00000215917 UGGT2Q9NYU1 1516 aa20.98■□□□□ 0.95
SRRD-201ENST00000215917 ZNF644Q9H582 1327 aaPredicted RBP20.97■□□□□ 0.95
SRRD-201ENST00000215917 CCDC18Q5T9S5 1454 aa20.97■□□□□ 0.95
SRRD-201ENST00000215917 MAGI1Q96QZ7 1491 aaPredicted RBP20.97■□□□□ 0.95
SRRD-201ENST00000215917 NBR1Q14596 966 aa20.97■□□□□ 0.95
SRRD-201ENST00000215917 EHBP1L1Q8N3D4 1523 aa20.97■□□□□ 0.95
SRRD-201ENST00000215917 HECW1Q76N89 1606 aa20.97■□□□□ 0.95
SRRD-201ENST00000215917 MAPKBP1O60336 1514 aa20.96■□□□□ 0.95
SRRD-201ENST00000215917 ANP32EQ9BTT0 268 aa20.95■□□□□ 0.94
SRRD-201ENST00000215917 SUPT6HQ7KZ85 1726 aaKnown RBP20.95■□□□□ 0.94
SRRD-201ENST00000215917 SENP3-EIF4A1A0A087X0R7 540 aa20.94■□□□□ 0.94
SRRD-201ENST00000215917 CDK11AQ9UQ88 783 aaPredicted RBP20.94■□□□□ 0.94
SRRD-201ENST00000215917 PLB1Q6P1J6 1458 aa20.94■□□□□ 0.94
SRRD-201ENST00000215917 CEP170Q5SW79 1584 aa20.94■□□□□ 0.94
SRRD-201ENST00000215917 KIAA0556O60303 1618 aa20.93■□□□□ 0.94
SRRD-201ENST00000215917 RTL5Q5HYW3 569 aaPredicted RBP20.93■□□□□ 0.94
SRRD-201ENST00000215917 TONSLQ96HA7 1378 aa20.91■□□□□ 0.94
SRRD-201ENST00000215917 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.9■□□□□ 0.94
SRRD-201ENST00000215917 SUPT16HQ9Y5B9 1047 aaKnown RBP20.9■□□□□ 0.94
SRRD-201ENST00000215917 NUP153P49790 1475 aaKnown RBP20.9■□□□□ 0.94
SRRD-201ENST00000215917 PRG4Q92954 1404 aaPredicted RBP20.89■□□□□ 0.93
SRRD-201ENST00000215917 CARMIL2Q6F5E8 1435 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms