RNA–Protein interactions for RNA: ENST00000209718.7

KRT23-201, Transcript of keratin 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT23, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT23-201ENST00000209718 ATAD2BQ9ULI0 1458 aa23.24■■□□□ 1.31
KRT23-201ENST00000209718 WDR97A6NE52 1622 aa23.23■■□□□ 1.31
KRT23-201ENST00000209718 TRIM52Q96A61 297 aa23.23■■□□□ 1.31
KRT23-201ENST00000209718 BIVM-ERCC5R4GMW8 1640 aa23.21■■□□□ 1.31
KRT23-201ENST00000209718 RAB3GAP2Q9H2M9 1393 aa23.18■■□□□ 1.3
KRT23-201ENST00000209718 PPP4R2Q9NY27 417 aa23.18■■□□□ 1.3
KRT23-201ENST00000209718 NOP58Q9Y2X3 529 aaKnown RBP23.16■■□□□ 1.3
KRT23-201ENST00000209718 KANK4Q5T7N3 995 aaPredicted RBP23.13■■□□□ 1.29
KRT23-201ENST00000209718 PRXQ9BXM0 1461 aa23.12■■□□□ 1.29
KRT23-201ENST00000209718 ANO8Q9HCE9 1232 aaPredicted RBP23.12■■□□□ 1.29
KRT23-201ENST00000209718 SETD5Q9C0A6 1442 aa23.11■■□□□ 1.29
KRT23-201ENST00000209718 MAP3K1Q13233 1512 aa23.06■■□□□ 1.28
KRT23-201ENST00000209718 PABPN1Q86U42 306 aaKnown RBP eCLIP23■■□□□ 1.27
KRT23-201ENST00000209718 RTL5Q5HYW3 569 aaPredicted RBP22.98■■□□□ 1.27
KRT23-201ENST00000209718 HNRNPUQ00839 825 aaKnown RBP eCLIP22.98■■□□□ 1.27
KRT23-201ENST00000209718 SALL2Q9Y467 1007 aaPredicted RBP22.94■■□□□ 1.26
KRT23-201ENST00000209718 UBE2Q2Q8WVN8 375 aa22.93■■□□□ 1.26
KRT23-201ENST00000209718 NBR1Q14596 966 aa22.91■■□□□ 1.26
KRT23-201ENST00000209718 IRX6P78412 446 aaPredicted RBP22.89■■□□□ 1.26
KRT23-201ENST00000209718 IPO9Q96P70 1041 aaKnown RBP22.89■■□□□ 1.25
KRT23-201ENST00000209718 SIN3AQ96ST3 1273 aa22.89■■□□□ 1.25
KRT23-201ENST00000209718 HMGXB3Q12766 1538 aa22.88■■□□□ 1.25
KRT23-201ENST00000209718 ANP32AP39687 249 aaKnown RBP22.88■■□□□ 1.25
KRT23-201ENST00000209718 TIAM1Q13009 1591 aa22.87■■□□□ 1.25
KRT23-201ENST00000209718 PAK3O75914 559 aaPredicted RBP22.87■■□□□ 1.25
KRT23-201ENST00000209718 RANGAP1P46060 587 aaPredicted RBP22.87■■□□□ 1.25
KRT23-201ENST00000209718 KIF27Q86VH2 1401 aa22.86■■□□□ 1.25
KRT23-201ENST00000209718 ARHGAP35Q9NRY4 1499 aa22.84■■□□□ 1.25
KRT23-201ENST00000209718 FHAD1B1AJZ9 1412 aa22.84■■□□□ 1.25
KRT23-201ENST00000209718 CUX1P39880 1505 aa22.83■■□□□ 1.25
KRT23-201ENST00000209718 WASHC2AQ641Q2 1341 aa22.83■■□□□ 1.25
KRT23-201ENST00000209718 USP35Q9P2H5 1018 aa22.81■■□□□ 1.24
KRT23-201ENST00000209718 C11orf95C9JLR9 678 aaPredicted RBP22.8■■□□□ 1.24
KRT23-201ENST00000209718 ZBTB47Q9UFB7 747 aaPredicted RBP22.8■■□□□ 1.24
KRT23-201ENST00000209718 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.78■■□□□ 1.24
KRT23-201ENST00000209718 TONSLQ96HA7 1378 aa22.78■■□□□ 1.24
KRT23-201ENST00000209718 ZBED9Q6R2W3 1325 aa22.77■■□□□ 1.24
KRT23-201ENST00000209718 NCAPD3P42695 1498 aa22.77■■□□□ 1.24
KRT23-201ENST00000209718 B4GALNT3Q6L9W6 998 aa22.77■■□□□ 1.24
KRT23-201ENST00000209718 LRRC9Q6ZRR7 1453 aa22.75■■□□□ 1.23
KRT23-201ENST00000209718 HIRIP3Q9BW71 556 aaPredicted RBP22.73■■□□□ 1.23
KRT23-201ENST00000209718 IL27Q8NEV9 243 aa22.72■■□□□ 1.23
KRT23-201ENST00000209718 NCOA2Q15596 1464 aa22.72■■□□□ 1.23
KRT23-201ENST00000209718 WASHC2CQ9Y4E1 1318 aa22.7■■□□□ 1.22
KRT23-201ENST00000209718 CCDC136Q96JN2 1154 aa22.7■■□□□ 1.22
KRT23-201ENST00000209718 CFTRP13569 1480 aa22.69■■□□□ 1.22
KRT23-201ENST00000209718 PRDM2Q13029 1718 aa22.68■■□□□ 1.22
KRT23-201ENST00000209718 CFAP43Q8NDM7 1665 aa22.68■■□□□ 1.22
KRT23-201ENST00000209718 PHLDB1Q86UU1 1377 aa22.67■■□□□ 1.22
KRT23-201ENST00000209718 CNTLNQ9NXG0 1405 aa22.65■■□□□ 1.22
KRT23-201ENST00000209718 SMG6Q86US8 1419 aaKnown RBP22.63■■□□□ 1.21
KRT23-201ENST00000209718 RNF123Q5XPI4 1314 aa22.62■■□□□ 1.21
KRT23-201ENST00000209718 UACAQ9BZF9 1416 aa22.6■■□□□ 1.21
KRT23-201ENST00000209718 KDM5BQ9UGL1 1544 aa22.59■■□□□ 1.21
KRT23-201ENST00000209718 PPM1GO15355 546 aaPredicted RBP22.58■■□□□ 1.21
KRT23-201ENST00000209718 FAM50AQ14320 339 aaKnown RBP22.56■■□□□ 1.2
KRT23-201ENST00000209718 CCDC18Q5T9S5 1454 aa22.53■■□□□ 1.2
KRT23-201ENST00000209718 PRKRIP1Q9H875 184 aaPredicted RBP22.52■■□□□ 1.2
KRT23-201ENST00000209718 RTN4Q9NQC3 1192 aaKnown RBP22.52■■□□□ 1.2
KRT23-201ENST00000209718 IGF1RP08069 1367 aa22.51■■□□□ 1.19
KRT23-201ENST00000209718 HFM1A2PYH4 1435 aa22.5■■□□□ 1.19
KRT23-201ENST00000209718 NEFMP07197 916 aa22.49■■□□□ 1.19
KRT23-201ENST00000209718 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.49■■□□□ 1.19
KRT23-201ENST00000209718 MRS2Q9HD23 443 aa22.47■■□□□ 1.19
KRT23-201ENST00000209718 NUDCQ9Y266 331 aa22.47■■□□□ 1.19
KRT23-201ENST00000209718 HSPA5P11021 654 aaKnown RBP22.46■■□□□ 1.19
KRT23-201ENST00000209718 ABCA5Q8WWZ7 1642 aa22.45■■□□□ 1.19
KRT23-201ENST00000209718 TCERG1O14776 1098 aaKnown RBP22.45■■□□□ 1.18
KRT23-201ENST00000209718 NCOA1Q15788 1441 aa22.45■■□□□ 1.18
KRT23-201ENST00000209718 PTPN23Q9H3S7 1636 aa22.45■■□□□ 1.18
KRT23-201ENST00000209718 EIF4G2P78344 907 aaKnown RBP eCLIP22.45■■□□□ 1.18
KRT23-201ENST00000209718 CCDC184Q52MB2 194 aa22.43■■□□□ 1.18
KRT23-201ENST00000209718 FAM9BQ8IZU0 186 aa22.43■■□□□ 1.18
KRT23-201ENST00000209718 CARMIL1Q5VZK9 1371 aa22.41■■□□□ 1.18
KRT23-201ENST00000209718 CCDC7Q96M83 1385 aa22.41■■□□□ 1.18
KRT23-201ENST00000209718 PCF11O94913 1555 aaKnown RBP22.4■■□□□ 1.18
KRT23-201ENST00000209718 MS4A1P11836 297 aa22.4■■□□□ 1.18
KRT23-201ENST00000209718 RSPH6AQ9H0K4 717 aa22.4■■□□□ 1.18
KRT23-201ENST00000209718 AKNAQ7Z591 1439 aa22.4■■□□□ 1.18
KRT23-201ENST00000209718 AQRO60306 1485 aaKnown RBP eCLIP22.39■■□□□ 1.17
KRT23-201ENST00000209718 POLR1AO95602 1720 aaPredicted RBP22.39■■□□□ 1.17
KRT23-201ENST00000209718 FYCO1Q9BQS8 1478 aa22.39■■□□□ 1.17
KRT23-201ENST00000209718 EFCAB5A4FU69 1503 aa22.38■■□□□ 1.17
KRT23-201ENST00000209718 GSE1Q14687 1217 aa22.38■■□□□ 1.17
KRT23-201ENST00000209718 FGD6Q6ZV73 1430 aa22.37■■□□□ 1.17
KRT23-201ENST00000209718 DDRGK1Q96HY6 314 aa22.36■■□□□ 1.17
KRT23-201ENST00000209718 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
KRT23-201ENST00000209718 FMN1Q68DA7 1419 aa22.34■■□□□ 1.17
KRT23-201ENST00000209718 NAIPQ13075 1403 aa22.31■■□□□ 1.16
KRT23-201ENST00000209718 LAS1LQ9Y4W2 734 aaKnown RBP22.31■■□□□ 1.16
KRT23-201ENST00000209718 HECW1Q76N89 1606 aa22.31■■□□□ 1.16
KRT23-201ENST00000209718 BACH2Q9BYV9 841 aa22.3■■□□□ 1.16
KRT23-201ENST00000209718 CASKIN1Q8WXD9 1431 aa22.3■■□□□ 1.16
KRT23-201ENST00000209718 CADPSQ9ULU8 1353 aa22.29■■□□□ 1.16
KRT23-201ENST00000209718 PDE4AP27815 886 aa22.29■■□□□ 1.16
KRT23-201ENST00000209718 BRPF3Q9ULD4 1205 aa22.29■■□□□ 1.16
KRT23-201ENST00000209718 FAM43AQ8N2R8 423 aa22.28■■□□□ 1.16
KRT23-201ENST00000209718 CC2D2AQ9P2K1 1620 aa22.25■■□□□ 1.15
KRT23-201ENST00000209718 EIF5BO60841 1220 aaKnown RBP22.25■■□□□ 1.15
KRT23-201ENST00000209718 NPM2Q86SE8 214 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms