RNA–Protein interactions for RNA: ENST00000194155.6

PCDHB2-201, Transcript of protocadherin beta 2, humanhuman

APPRIS P1 BASIC

Gene PCDHB2, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-201ENST00000194155 TSHZ2Q9NRE2 1034 aa18.21■□□□□ 0.51
PCDHB2-201ENST00000194155 CLSPNQ9HAW4 1339 aa18.2■□□□□ 0.5
PCDHB2-201ENST00000194155 TSPY4P0CV99 314 aa18.2■□□□□ 0.5
PCDHB2-201ENST00000194155 TSPY10P0CW01 314 aa18.2■□□□□ 0.5
PCDHB2-201ENST00000194155 CEP162Q5TB80 1403 aa18.19■□□□□ 0.5
PCDHB2-201ENST00000194155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.15■□□□□ 0.5
PCDHB2-201ENST00000194155 TNIKQ9UKE5 1360 aa18.13■□□□□ 0.49
PCDHB2-201ENST00000194155 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
PCDHB2-201ENST00000194155 BICRAQ9NZM4 1560 aa18.11■□□□□ 0.49
PCDHB2-201ENST00000194155 TRHP20396 242 aaPredicted RBP18.1■□□□□ 0.49
PCDHB2-201ENST00000194155 CHGAP10645 457 aaKnown RBP18.1■□□□□ 0.49
PCDHB2-201ENST00000194155 CFDP1Q9UEE9 299 aaPredicted RBP18.06■□□□□ 0.48
PCDHB2-201ENST00000194155 NESP48681 1621 aa18.06■□□□□ 0.48
PCDHB2-201ENST00000194155 STAG3Q9UJ98 1225 aa18.04■□□□□ 0.48
PCDHB2-201ENST00000194155 RRP7BPQ9NSQ0 103 aa18.02■□□□□ 0.47
PCDHB2-201ENST00000194155 JPH4Q96JJ6 628 aa18.01■□□□□ 0.47
PCDHB2-201ENST00000194155 DDX10Q13206 875 aaKnown RBP18■□□□□ 0.47
PCDHB2-201ENST00000194155 CARMIL2Q6F5E8 1435 aa17.95■□□□□ 0.46
PCDHB2-201ENST00000194155 RAD54L2Q9Y4B4 1467 aa17.95■□□□□ 0.46
PCDHB2-201ENST00000194155 RBM19Q9Y4C8 960 aaKnown RBP17.95■□□□□ 0.46
PCDHB2-201ENST00000194155 OSCARQ8IYS5 282 aa17.95■□□□□ 0.46
PCDHB2-201ENST00000194155 ARID4BQ4LE39 1312 aaPredicted RBP17.93■□□□□ 0.46
PCDHB2-201ENST00000194155 FGD5Q6ZNL6 1462 aa17.92■□□□□ 0.46
PCDHB2-201ENST00000194155 CYB5RLQ6IPT4 315 aa17.92■□□□□ 0.46
PCDHB2-201ENST00000194155 RUSC2Q8N2Y8 1516 aa17.92■□□□□ 0.46
PCDHB2-201ENST00000194155 IRX6P78412 446 aaPredicted RBP17.9■□□□□ 0.46
PCDHB2-201ENST00000194155 CFTRP13569 1480 aa17.9■□□□□ 0.46
PCDHB2-201ENST00000194155 FHAD1B1AJZ9 1412 aa17.9■□□□□ 0.46
PCDHB2-201ENST00000194155 ANP32CO43423 234 aa17.89■□□□□ 0.45
PCDHB2-201ENST00000194155 AQRO60306 1485 aaKnown RBP eCLIP17.88■□□□□ 0.45
PCDHB2-201ENST00000194155 HIRIP3Q9BW71 556 aaPredicted RBP17.87■□□□□ 0.45
PCDHB2-201ENST00000194155 RAPGEF2Q9Y4G8 1499 aa17.87■□□□□ 0.45
PCDHB2-201ENST00000194155 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
PCDHB2-201ENST00000194155 HMGXB3Q12766 1538 aa17.85■□□□□ 0.45
PCDHB2-201ENST00000194155 GAPVD1Q14C86 1478 aa17.84■□□□□ 0.45
PCDHB2-201ENST00000194155 IGF1RP08069 1367 aa17.83■□□□□ 0.44
PCDHB2-201ENST00000194155 CCNB3Q8WWL7 1395 aa17.82■□□□□ 0.44
PCDHB2-201ENST00000194155 NBR1Q14596 966 aa17.82■□□□□ 0.44
PCDHB2-201ENST00000194155 KDM2AQ9Y2K7 1162 aa17.81■□□□□ 0.44
PCDHB2-201ENST00000194155 TONSLQ96HA7 1378 aa17.8■□□□□ 0.44
PCDHB2-201ENST00000194155 RTL5Q5HYW3 569 aaPredicted RBP17.8■□□□□ 0.44
PCDHB2-201ENST00000194155 KANK4Q5T7N3 995 aaPredicted RBP17.79■□□□□ 0.44
PCDHB2-201ENST00000194155 FHOD3Q2V2M9 1422 aa17.78■□□□□ 0.44
PCDHB2-201ENST00000194155 MLECQ14165 292 aa17.76■□□□□ 0.43
PCDHB2-201ENST00000194155 HNRNPUQ00839 825 aaKnown RBP eCLIP17.74■□□□□ 0.43
PCDHB2-201ENST00000194155 FMN1Q68DA7 1419 aa17.74■□□□□ 0.43
PCDHB2-201ENST00000194155 RGL3Q3MIN7 710 aa17.73■□□□□ 0.43
PCDHB2-201ENST00000194155 VPS8Q8N3P4 1428 aa17.73■□□□□ 0.43
PCDHB2-201ENST00000194155 MRC2Q9UBG0 1479 aa17.72■□□□□ 0.43
PCDHB2-201ENST00000194155 UNC13AQ9UPW8 1703 aa17.72■□□□□ 0.43
PCDHB2-201ENST00000194155 PTPRGP23470 1445 aa17.71■□□□□ 0.43
PCDHB2-201ENST00000194155 DAXXQ9UER7 740 aaPredicted RBP17.69■□□□□ 0.42
PCDHB2-201ENST00000194155 EFCAB2Q5VUJ9 269 aa17.69■□□□□ 0.42
PCDHB2-201ENST00000194155 TOPBP1Q92547 1522 aa17.66■□□□□ 0.42
PCDHB2-201ENST00000194155 PPP1R15AO75807 674 aaPredicted RBP17.66■□□□□ 0.42
PCDHB2-201ENST00000194155 GGT6Q6P531 493 aa17.65■□□□□ 0.42
PCDHB2-201ENST00000194155 DEKP35659 375 aaKnown RBP17.64■□□□□ 0.41
PCDHB2-201ENST00000194155 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
PCDHB2-201ENST00000194155 GRIN2BQ13224 1484 aa17.62■□□□□ 0.41
PCDHB2-201ENST00000194155 HNRNPMP52272 730 aaKnown RBP eCLIP17.58■□□□□ 0.4
PCDHB2-201ENST00000194155 IFT140Q96RY7 1462 aa17.58■□□□□ 0.4
PCDHB2-201ENST00000194155 SIN3AQ96ST3 1273 aa17.57■□□□□ 0.4
PCDHB2-201ENST00000194155 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
PCDHB2-201ENST00000194155 CUX1P39880 1505 aa17.56■□□□□ 0.4
PCDHB2-201ENST00000194155 RTN4Q9NQC3 1192 aaKnown RBP17.55■□□□□ 0.4
PCDHB2-201ENST00000194155 LAMC3Q9Y6N6 1575 aa17.54■□□□□ 0.4
PCDHB2-201ENST00000194155 ARHGAP35Q9NRY4 1499 aa17.53■□□□□ 0.4
PCDHB2-201ENST00000194155 NPM2Q86SE8 214 aaKnown RBP17.53■□□□□ 0.4
PCDHB2-201ENST00000194155 ANP32AP39687 249 aaKnown RBP17.53■□□□□ 0.4
PCDHB2-201ENST00000194155 FAM9BQ8IZU0 186 aa17.52■□□□□ 0.4
PCDHB2-201ENST00000194155 DHX57Q6P158 1386 aaKnown RBP17.51■□□□□ 0.39
PCDHB2-201ENST00000194155 C14orf37Q86TY3 774 aa17.5■□□□□ 0.39
PCDHB2-201ENST00000194155 FAM69CQ0P6D2 419 aa17.49■□□□□ 0.39
PCDHB2-201ENST00000194155 EIF5BO60841 1220 aaKnown RBP17.49■□□□□ 0.39
PCDHB2-201ENST00000194155 B4GALNT3Q6L9W6 998 aa17.49■□□□□ 0.39
PCDHB2-201ENST00000194155 KIF3BO15066 747 aa17.48■□□□□ 0.39
PCDHB2-201ENST00000194155 SLC24A1O60721 1099 aa17.48■□□□□ 0.39
PCDHB2-201ENST00000194155 MSH5O43196 834 aa17.48■□□□□ 0.39
PCDHB2-201ENST00000194155 PEG3Q9GZU2 1588 aa17.47■□□□□ 0.39
PCDHB2-201ENST00000194155 PLEKHG5O94827 1062 aa17.47■□□□□ 0.39
PCDHB2-201ENST00000194155 SPAG9O60271 1321 aaKnown RBP17.46■□□□□ 0.39
PCDHB2-201ENST00000194155 PRKCSHP14314 528 aaPredicted RBP17.46■□□□□ 0.39
PCDHB2-201ENST00000194155 SNAPC4Q5SXM2 1469 aa17.45■□□□□ 0.38
PCDHB2-201ENST00000194155 DNMBPQ6XZF7 1577 aa17.45■□□□□ 0.38
PCDHB2-201ENST00000194155 ZBTB47Q9UFB7 747 aaPredicted RBP17.45■□□□□ 0.38
PCDHB2-201ENST00000194155 PRG4Q92954 1404 aaPredicted RBP17.45■□□□□ 0.38
PCDHB2-201ENST00000194155 CCDC18Q5T9S5 1454 aa17.43■□□□□ 0.38
PCDHB2-201ENST00000194155 FOXD1Q16676 465 aa17.43■□□□□ 0.38
PCDHB2-201ENST00000194155 NOP58Q9Y2X3 529 aaKnown RBP17.43■□□□□ 0.38
PCDHB2-201ENST00000194155 KANK1Q14678 1352 aa17.42■□□□□ 0.38
PCDHB2-201ENST00000194155 SENP3-EIF4A1A0A087X0R7 540 aa17.42■□□□□ 0.38
PCDHB2-201ENST00000194155 TOP2BQ02880 1626 aa17.41■□□□□ 0.38
PCDHB2-201ENST00000194155 PKD2Q13563 968 aa17.41■□□□□ 0.38
PCDHB2-201ENST00000194155 NEFMP07197 916 aa17.4■□□□□ 0.38
PCDHB2-201ENST00000194155 EIF4G2P78344 907 aaKnown RBP eCLIP17.4■□□□□ 0.38
PCDHB2-201ENST00000194155 PPP4R2Q9NY27 417 aa17.4■□□□□ 0.38
PCDHB2-201ENST00000194155 URB2Q14146 1524 aaKnown RBP17.38■□□□□ 0.37
PCDHB2-201ENST00000194155 RSPH4AQ5TD94 716 aa17.38■□□□□ 0.37
PCDHB2-201ENST00000194155 CCDC136Q96JN2 1154 aa17.38■□□□□ 0.37
PCDHB2-201ENST00000194155 NUP155O75694 1391 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms