RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Eea1Q8BL66 1411 aa22.19■■□□□ 1.14
Ssr1-204ENSMUST00000225319 Ankrd26Q811D2 1581 aa22.18■■□□□ 1.14
Ssr1-204ENSMUST00000225319 Polr1aO35134 1717 aaKnown RBP22.18■■□□□ 1.14
Ssr1-204ENSMUST00000225319 Setd1bQ8CFT2 1985 aa22.17■■□□□ 1.14
Ssr1-204ENSMUST00000225319 Grin2aP35436 1464 aa22.16■■□□□ 1.14
Ssr1-204ENSMUST00000225319 Nup160Q9Z0W3 1402 aaKnown RBP22.14■■□□□ 1.14
Ssr1-204ENSMUST00000225319 Rpap1Q80TE0 1409 aa22.11■■□□□ 1.13
Ssr1-204ENSMUST00000225319 Cux1P53564 1515 aa22.11■■□□□ 1.13
Ssr1-204ENSMUST00000225319 Arap1Q4LDD4 1452 aa22.11■■□□□ 1.13
Ssr1-204ENSMUST00000225319 Setd5Q5XJV7 1441 aa22.08■■□□□ 1.12
Ssr1-204ENSMUST00000225319 EprsQ8CGC7 1512 aaKnown RBP22.07■■□□□ 1.12
Ssr1-204ENSMUST00000225319 Arhgef5E9Q7D5 1581 aa22.07■■□□□ 1.12
Ssr1-204ENSMUST00000225319 Lmo7E9PYF4 1699 aaKnown RBP22.06■■□□□ 1.12
Ssr1-204ENSMUST00000225319 Eif4g3Q80XI3 1579 aaKnown RBP22.06■■□□□ 1.12
Ssr1-204ENSMUST00000225319 Fyco1Q8VDC1 1437 aa22.05■■□□□ 1.12
Ssr1-204ENSMUST00000225319 Adamts12Q811B3 1600 aa22.04■■□□□ 1.12
Ssr1-204ENSMUST00000225319 Cc2d2bA0A286YDU8 1405 aa22.02■■□□□ 1.11
Ssr1-204ENSMUST00000225319 Pcf11G3X9Z4 1553 aa21.99■■□□□ 1.11
Ssr1-204ENSMUST00000225319 Rusc2Q80U22 1514 aa21.99■■□□□ 1.11
Ssr1-204ENSMUST00000225319 Abca5Q8K448 1642 aa21.98■■□□□ 1.11
Ssr1-204ENSMUST00000225319 Tiam1Q60610 1591 aa21.94■■□□□ 1.1
Ssr1-204ENSMUST00000225319 WizO88286 1684 aaKnown RBP21.94■■□□□ 1.1
Ssr1-204ENSMUST00000225319 CadpsQ80TJ1 1355 aa21.94■■□□□ 1.1
Ssr1-204ENSMUST00000225319 TchhA0A0B4J1F9 1599 aa21.93■■□□□ 1.1
Ssr1-204ENSMUST00000225319 Abca16E9PWJ7 1678 aa21.91■■□□□ 1.1
Ssr1-204ENSMUST00000225319 Peg3Q3URU2 1571 aa21.91■■□□□ 1.1
Ssr1-204ENSMUST00000225319 Gm7298A0A0N4SVU1 1476 aa21.9■■□□□ 1.1
Ssr1-204ENSMUST00000225319 Soga1E1U8D0 1418 aa21.88■■□□□ 1.09
Ssr1-204ENSMUST00000225319 CntlnA2AM05 1397 aa21.86■■□□□ 1.09
Ssr1-204ENSMUST00000225319 Naip1Q9QWK5 1403 aa21.86■■□□□ 1.09
Ssr1-204ENSMUST00000225319 BlmO88700 1416 aa21.84■■□□□ 1.09
Ssr1-204ENSMUST00000225319 PxdnQ3UQ28 1475 aa21.84■■□□□ 1.09
Ssr1-204ENSMUST00000225319 Slx4Q6P1D7 1565 aa21.81■■□□□ 1.08
Ssr1-204ENSMUST00000225319 Abcc2Q8VI47 1543 aa21.8■■□□□ 1.08
Ssr1-204ENSMUST00000225319 Plekhg3Q4VAC9 1341 aa21.77■■□□□ 1.08
Ssr1-204ENSMUST00000225319 Aebp1Q640N1 1128 aa21.77■■□□□ 1.07
Ssr1-204ENSMUST00000225319 Pcgf6Q99NA9 353 aa21.75■■□□□ 1.07
Ssr1-204ENSMUST00000225319 Ap3b1Q9Z1T1 1105 aa21.73■■□□□ 1.07
Ssr1-204ENSMUST00000225319 Map3k4O08648 1597 aa21.71■■□□□ 1.07
Ssr1-204ENSMUST00000225319 Gm1043A0A140LJC2 1431 aa21.69■■□□□ 1.06
Ssr1-204ENSMUST00000225319 Shroom2A2ALU4 1481 aa21.68■■□□□ 1.06
Ssr1-204ENSMUST00000225319 Dnmt1P13864 1620 aaKnown RBP21.67■■□□□ 1.06
Ssr1-204ENSMUST00000225319 UbtfP25976 765 aaKnown RBP21.66■■□□□ 1.06
Ssr1-204ENSMUST00000225319 NefmP08553 848 aa21.62■■□□□ 1.05
Ssr1-204ENSMUST00000225319 Ncapd3Q6ZQK0 1506 aa21.61■■□□□ 1.05
Ssr1-204ENSMUST00000225319 WrnO09053 1401 aa21.6■■□□□ 1.05
Ssr1-204ENSMUST00000225319 Kif27Q7M6Z4 1394 aa21.59■■□□□ 1.05
Ssr1-204ENSMUST00000225319 Fgd6Q69ZL1 1399 aa21.59■■□□□ 1.05
Ssr1-204ENSMUST00000225319 Mier1Q5UAK0 511 aa21.58■■□□□ 1.05
Ssr1-204ENSMUST00000225319 BC005561E9Q5E2 1589 aa21.58■■□□□ 1.05
Ssr1-204ENSMUST00000225319 Arhgap27A2AB59 869 aa21.57■■□□□ 1.04
Ssr1-204ENSMUST00000225319 Rapgef6Q5NCJ1 1609 aa21.56■■□□□ 1.04
Ssr1-204ENSMUST00000225319 Lmtk2Q3TYD6 1471 aa21.55■■□□□ 1.04
Ssr1-204ENSMUST00000225319 Zcchc11B2RX14 1644 aaKnown RBP21.51■■□□□ 1.03
Ssr1-204ENSMUST00000225319 Rrbp1Q99PL5 1605 aaKnown RBP21.47■■□□□ 1.03
Ssr1-204ENSMUST00000225319 Neo1P97798 1493 aa21.47■■□□□ 1.03
Ssr1-204ENSMUST00000225319 Gcc2Q8CHG3 1679 aa21.47■■□□□ 1.03
Ssr1-204ENSMUST00000225319 Arhgef12Q8R4H2 1543 aaKnown RBP21.46■■□□□ 1.03
Ssr1-204ENSMUST00000225319 Arhgef11Q68FM7 1552 aa21.46■■□□□ 1.03
Ssr1-204ENSMUST00000225319 Lmod2Q3UHZ5 550 aa21.44■■□□□ 1.02
Ssr1-204ENSMUST00000225319 Ncoa2Q61026 1462 aa21.43■■□□□ 1.02
Ssr1-204ENSMUST00000225319 NexmifQ5DTT1 1515 aa21.42■■□□□ 1.02
Ssr1-204ENSMUST00000225319 Arhgap31A6X8Z5 1425 aa21.42■■□□□ 1.02
Ssr1-204ENSMUST00000225319 Mug1P28665 1476 aa21.42■■□□□ 1.02
Ssr1-204ENSMUST00000225319 Supt5hO55201 1082 aaKnown RBP21.41■■□□□ 1.02
Ssr1-204ENSMUST00000225319 3425401B19RikD3Z1D3 1412 aa21.41■■□□□ 1.02
Ssr1-204ENSMUST00000225319 Ccdc141E9Q8Q6 1531 aa21.41■■□□□ 1.02
Ssr1-204ENSMUST00000225319 Kiaa1551Q5DTW7 1521 aa21.4■■□□□ 1.02
Ssr1-204ENSMUST00000225319 AknaQ80VW7 1404 aa21.39■■□□□ 1.01
Ssr1-204ENSMUST00000225319 Cdc42bpaQ3UU96 1719 aa21.39■■□□□ 1.01
Ssr1-204ENSMUST00000225319 Ncoa3O09000 1398 aa21.38■■□□□ 1.01
Ssr1-204ENSMUST00000225319 Mroh2aD3Z750 1679 aa21.37■■□□□ 1.01
Ssr1-204ENSMUST00000225319 Kdm5bQ80Y84 1544 aa21.37■■□□□ 1.01
Ssr1-204ENSMUST00000225319 Abcc1O35379 1528 aa21.36■■□□□ 1.01
Ssr1-204ENSMUST00000225319 Chd1P40201 1711 aa21.36■■□□□ 1.01
Ssr1-204ENSMUST00000225319 Jph4Q80WT0 628 aa21.36■■□□□ 1.01
Ssr1-204ENSMUST00000225319 Ccnb3Q810T2 1396 aa21.35■■□□□ 1.01
Ssr1-204ENSMUST00000225319 Gm14025A2AP89 1413 aa21.34■■□□□ 1.01
Ssr1-204ENSMUST00000225319 Dhx57Q6P5D3 1388 aaKnown RBP21.33■■□□□ 1.01
Ssr1-204ENSMUST00000225319 Magi1Q6RHR9 1471 aa21.33■■□□□ 1.01
Ssr1-204ENSMUST00000225319 Mapkbp1Q6NS57 1503 aa21.31■■□□□ 1
Ssr1-204ENSMUST00000225319 Fam163aQ8CAA5 168 aa21.29■■□□□ 1
Ssr1-204ENSMUST00000225319 A2mQ6GQT1 1474 aa21.26■□□□□ 0.99
Ssr1-204ENSMUST00000225319 Naip2Q9QUK4 1447 aa21.24■□□□□ 0.99
Ssr1-204ENSMUST00000225319 Kiaa1210E9Q0C6 1637 aa21.24■□□□□ 0.99
Ssr1-204ENSMUST00000225319 Fancd2Q80V62 1450 aa21.24■□□□□ 0.99
Ssr1-204ENSMUST00000225319 Prex2Q3LAC4 1598 aa21.22■□□□□ 0.99
Ssr1-204ENSMUST00000225319 Cul7Q8VE73 1689 aa21.22■□□□□ 0.99
Ssr1-204ENSMUST00000225319 Mia2Q91ZV0 1396 aa21.22■□□□□ 0.99
Ssr1-204ENSMUST00000225319 Fhad1A6PWD2 1420 aa21.22■□□□□ 0.99
Ssr1-204ENSMUST00000225319 NhsB1AV60 1647 aa21.2■□□□□ 0.98
Ssr1-204ENSMUST00000225319 Fam208aQ69ZR9 1610 aaKnown RBP21.18■□□□□ 0.98
Ssr1-204ENSMUST00000225319 Adcy10Q8C0T9 1614 aa21.18■□□□□ 0.98
Ssr1-204ENSMUST00000225319 Wdr7Q920I9 1489 aa21.18■□□□□ 0.98
Ssr1-204ENSMUST00000225319 Vps8Q0P5W1 1427 aa21.17■□□□□ 0.98
Ssr1-204ENSMUST00000225319 Arhgef40Q3UPH7 1517 aa21.16■□□□□ 0.98
Ssr1-204ENSMUST00000225319 Mlh3A0A1Y7VMP7 1443 aa21.15■□□□□ 0.98
Ssr1-204ENSMUST00000225319 UacaQ8CGB3 1411 aa21.15■□□□□ 0.98
Ssr1-204ENSMUST00000225319 Rfx7F8VPJ6 1459 aa21.11■□□□□ 0.97
Ssr1-204ENSMUST00000225319 Caskin1Q6P9K8 1431 aa21.1■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 93.9 ms