RNA–Protein interactions for RNA: ENSMUST00000222544.1

Trim27-206, Transcript of Zinc finger protein RFP, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Trim27, Length 4,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-206ENSMUST00000222544 Ccer2J3QPU5 274 aa18.71■□□□□ 0.59
Trim27-206ENSMUST00000222544 Rad21Q61550 635 aaKnown RBP18.7■□□□□ 0.58
Trim27-206ENSMUST00000222544 Hspa5P20029 655 aaKnown RBP18.65■□□□□ 0.58
Trim27-206ENSMUST00000222544 Erich6D3Z6S9 713 aa18.63■□□□□ 0.57
Trim27-206ENSMUST00000222544 Eea1Q8BL66 1411 aa18.62■□□□□ 0.57
Trim27-206ENSMUST00000222544 Bcl11aQ9QYE3 773 aa18.59■□□□□ 0.57
Trim27-206ENSMUST00000222544 Kif15Q6P9L6 1387 aa18.58■□□□□ 0.56
Trim27-206ENSMUST00000222544 Polr3glQ8R0C0 218 aa18.58■□□□□ 0.56
Trim27-206ENSMUST00000222544 Cep162Q6ZQ06 1403 aa18.58■□□□□ 0.56
Trim27-206ENSMUST00000222544 Sin3aQ60520 1274 aaKnown RBP18.56■□□□□ 0.56
Trim27-206ENSMUST00000222544 Slc4a3P16283 1227 aa18.55■□□□□ 0.56
Trim27-206ENSMUST00000222544 Rgl3Q3UYI5 709 aa18.54■□□□□ 0.56
Trim27-206ENSMUST00000222544 Atp1b4Q99ME6 356 aa18.53■□□□□ 0.56
Trim27-206ENSMUST00000222544 Wwc2Q6NXJ0 1187 aa18.5■□□□□ 0.55
Trim27-206ENSMUST00000222544 Ofd1Q80Z25 1017 aa18.49■□□□□ 0.55
Trim27-206ENSMUST00000222544 Rangap1P46061 589 aaKnown RBP18.49■□□□□ 0.55
Trim27-206ENSMUST00000222544 Nlrp6Q91WS2 869 aa18.49■□□□□ 0.55
Trim27-206ENSMUST00000222544 Cecr2E9Q2Z1 1453 aa18.48■□□□□ 0.55
Trim27-206ENSMUST00000222544 Grwd1Q810D6 446 aaKnown RBP18.43■□□□□ 0.54
Trim27-206ENSMUST00000222544 Gm13695A2AK44 830 aa18.42■□□□□ 0.54
Trim27-206ENSMUST00000222544 Ercc6F8VPZ5 1481 aa18.4■□□□□ 0.54
Trim27-206ENSMUST00000222544 Rapgef2Q8CHG7 1496 aa18.37■□□□□ 0.53
Trim27-206ENSMUST00000222544 Supt16hQ920B9 1047 aa18.36■□□□□ 0.53
Trim27-206ENSMUST00000222544 Smarca2Q6DIC0 1577 aa18.35■□□□□ 0.53
Trim27-206ENSMUST00000222544 CanxP35564 591 aaKnown RBP18.35■□□□□ 0.53
Trim27-206ENSMUST00000222544 Nolc1E9Q5C9 702 aaKnown RBP18.34■□□□□ 0.53
Trim27-206ENSMUST00000222544 ScribQ80U72 1612 aa18.33■□□□□ 0.52
Trim27-206ENSMUST00000222544 Hsp90aa1P07901 733 aaKnown RBP18.33■□□□□ 0.52
Trim27-206ENSMUST00000222544 Apbb1Q9QXJ1 710 aa18.33■□□□□ 0.52
Trim27-206ENSMUST00000222544 CftrP26361 1476 aa18.3■□□□□ 0.52
Trim27-206ENSMUST00000222544 Fmn1Q05860 1466 aa18.29■□□□□ 0.52
Trim27-206ENSMUST00000222544 Exoc6Q8R313 802 aa18.27■□□□□ 0.52
Trim27-206ENSMUST00000222544 Upf2A2AT37 1269 aaKnown RBP18.27■□□□□ 0.52
Trim27-206ENSMUST00000222544 Arhgap27A2AB59 869 aa18.26■□□□□ 0.51
Trim27-206ENSMUST00000222544 Synj1Q8CHC4 1574 aa18.26■□□□□ 0.51
Trim27-206ENSMUST00000222544 Ccdc27Q3V036 639 aa18.25■□□□□ 0.51
Trim27-206ENSMUST00000222544 Dbr1Q923B1 550 aa18.25■□□□□ 0.51
Trim27-206ENSMUST00000222544 Trim30dE9PWL0 497 aa18.24■□□□□ 0.51
Trim27-206ENSMUST00000222544 Trim26Q99PN3 545 aa18.24■□□□□ 0.51
Trim27-206ENSMUST00000222544 Card11Q8CIS0 1159 aa18.24■□□□□ 0.51
Trim27-206ENSMUST00000222544 Ccdc18Q640L5 1455 aa18.23■□□□□ 0.51
Trim27-206ENSMUST00000222544 B4galnt3Q6L8S8 986 aa18.23■□□□□ 0.51
Trim27-206ENSMUST00000222544 Baz1bQ9Z277 1479 aa18.21■□□□□ 0.51
Trim27-206ENSMUST00000222544 Pds5bQ4VA53 1446 aaKnown RBP18.21■□□□□ 0.51
Trim27-206ENSMUST00000222544 4930567H17RikQ3V0K5 233 aa18.19■□□□□ 0.5
Trim27-206ENSMUST00000222544 Sycp2Q9CUU3 1500 aa18.19■□□□□ 0.5
Trim27-206ENSMUST00000222544 Safb2Q80YR5 991 aaKnown RBP18.19■□□□□ 0.5
Trim27-206ENSMUST00000222544 Mia2Q91ZV0 1396 aa18.18■□□□□ 0.5
Trim27-206ENSMUST00000222544 Pkd2O35245 966 aa18.16■□□□□ 0.5
Trim27-206ENSMUST00000222544 Neurod2Q62414 383 aa18.15■□□□□ 0.5
Trim27-206ENSMUST00000222544 Vsig10D3YX43 558 aa18.15■□□□□ 0.5
Trim27-206ENSMUST00000222544 Hdac5Q9Z2V6 1113 aa18.15■□□□□ 0.5
Trim27-206ENSMUST00000222544 Arid4bA2CG63 1314 aaKnown RBP18.15■□□□□ 0.5
Trim27-206ENSMUST00000222544 Kdm2aP59997 1161 aa18.14■□□□□ 0.5
Trim27-206ENSMUST00000222544 Crybg2B7ZCC2 1516 aa18.12■□□□□ 0.49
Trim27-206ENSMUST00000222544 Hsp90ab1P11499 724 aaKnown RBP18.11■□□□□ 0.49
Trim27-206ENSMUST00000222544 Aebp1Q640N1 1128 aa18.1■□□□□ 0.49
Trim27-206ENSMUST00000222544 Clstn2Q9ER65 966 aa18.09■□□□□ 0.49
Trim27-206ENSMUST00000222544 Cabp1Q9JLK7 227 aa18.08■□□□□ 0.48
Trim27-206ENSMUST00000222544 Cwc22Q8C5N3 908 aaKnown RBP18.07■□□□□ 0.48
Trim27-206ENSMUST00000222544 Mphosph9A6H5Y1 991 aa18.07■□□□□ 0.48
Trim27-206ENSMUST00000222544 Rundc1Q0VDN7 615 aa18.07■□□□□ 0.48
Trim27-206ENSMUST00000222544 Tcerg1Q8CGF7 1100 aaKnown RBP18.06■□□□□ 0.48
Trim27-206ENSMUST00000222544 Znf710Q3U288 666 aa18.06■□□□□ 0.48
Trim27-206ENSMUST00000222544 Spryd3E9Q9B3 442 aa18.06■□□□□ 0.48
Trim27-206ENSMUST00000222544 Armcx1Q9CX83 456 aa18.05■□□□□ 0.48
Trim27-206ENSMUST00000222544 Ccdc9Q8VC31 543 aaKnown RBP18.04■□□□□ 0.48
Trim27-206ENSMUST00000222544 Mtus2Q3UHD3 1353 aa18.03■□□□□ 0.48
Trim27-206ENSMUST00000222544 DekQ7TNV0 380 aaKnown RBP18.02■□□□□ 0.48
Trim27-206ENSMUST00000222544 Smg6P61406 1418 aaKnown RBP17.99■□□□□ 0.47
Trim27-206ENSMUST00000222544 Arhgap35Q91YM2 1499 aa17.99■□□□□ 0.47
Trim27-206ENSMUST00000222544 ChgaP26339 463 aaKnown RBP17.99■□□□□ 0.47
Trim27-206ENSMUST00000222544 Fyco1Q8VDC1 1437 aa17.99■□□□□ 0.47
Trim27-206ENSMUST00000222544 Trak1Q6PD31 939 aa17.99■□□□□ 0.47
Trim27-206ENSMUST00000222544 Irx3P81067 507 aa17.98■□□□□ 0.47
Trim27-206ENSMUST00000222544 Mroh3A0A1D5RM54 893 aa17.98■□□□□ 0.47
Trim27-206ENSMUST00000222544 Rrp7aQ9D1C9 280 aaKnown RBP17.97■□□□□ 0.47
Trim27-206ENSMUST00000222544 PrkcshO08795 521 aa17.97■□□□□ 0.47
Trim27-206ENSMUST00000222544 Kif27Q7M6Z4 1394 aa17.96■□□□□ 0.47
Trim27-206ENSMUST00000222544 Ythdc1E9Q5K9 736 aaKnown RBP17.95■□□□□ 0.46
Trim27-206ENSMUST00000222544 Ecm2Q5FW85 670 aa17.94■□□□□ 0.46
Trim27-206ENSMUST00000222544 Chmp5Q9D7S9 219 aa17.93■□□□□ 0.46
Trim27-206ENSMUST00000222544 Arid3cA6PWV5 409 aa17.91■□□□□ 0.46
Trim27-206ENSMUST00000222544 CntlnA2AM05 1397 aa17.9■□□□□ 0.46
Trim27-206ENSMUST00000222544 Ipo9Q91YE6 1041 aa17.9■□□□□ 0.46
Trim27-206ENSMUST00000222544 Cnga1P29974 684 aa17.9■□□□□ 0.46
Trim27-206ENSMUST00000222544 Zscan21Q07231 555 aa17.88■□□□□ 0.45
Trim27-206ENSMUST00000222544 Map4P27546 1125 aaKnown RBP17.88■□□□□ 0.45
Trim27-206ENSMUST00000222544 Ppm1gQ61074 542 aa17.87■□□□□ 0.45
Trim27-206ENSMUST00000222544 Cux2P70298 1426 aa17.87■□□□□ 0.45
Trim27-206ENSMUST00000222544 Pak3Q61036 559 aa17.87■□□□□ 0.45
Trim27-206ENSMUST00000222544 Plcb2A3KGF7 1181 aa17.85■□□□□ 0.45
Trim27-206ENSMUST00000222544 Rwdd1Q9CQK7 243 aa17.84■□□□□ 0.45
Trim27-206ENSMUST00000222544 Mak16Q8BGS0 296 aaKnown RBP17.84■□□□□ 0.45
Trim27-206ENSMUST00000222544 Ccnb3Q810T2 1396 aa17.84■□□□□ 0.45
Trim27-206ENSMUST00000222544 Gm20521D3Z5F7 333 aa17.84■□□□□ 0.45
Trim27-206ENSMUST00000222544 Ppp1r18Q8BQ30 594 aa17.83■□□□□ 0.44
Trim27-206ENSMUST00000222544 CrbnQ8C7D2 445 aa17.83■□□□□ 0.44
Trim27-206ENSMUST00000222544 Speer4f1Q9D5Q6 258 aa17.83■□□□□ 0.44
Trim27-206ENSMUST00000222544 Phldb1Q6PDH0 1371 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms