RNA–Protein interactions for RNA: ENSMUST00000222544.1

Trim27-206, Transcript of Zinc finger protein RFP, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Trim27, Length 4,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-206ENSMUST00000222544 Rhox8Q6VSS7 320 aa24.51■■□□□ 1.51
Trim27-206ENSMUST00000222544 Ehmt2Q9Z148 1263 aaKnown RBP22.93■■□□□ 1.26
Trim27-206ENSMUST00000222544 Rpgrip1Q9EPQ2 1331 aa22.58■■□□□ 1.21
Trim27-206ENSMUST00000222544 NischQ80TM9 1593 aa22.29■■□□□ 1.16
Trim27-206ENSMUST00000222544 Ccdc136Q3TVA9 1136 aa22.17■■□□□ 1.14
Trim27-206ENSMUST00000222544 Zeb1Q64318 1117 aa21.68■■□□□ 1.06
Trim27-206ENSMUST00000222544 Acin1Q9JIX8 1338 aaKnown RBP21.65■■□□□ 1.06
Trim27-206ENSMUST00000222544 Gab3Q8BSM5 595 aa21.6■■□□□ 1.05
Trim27-206ENSMUST00000222544 Trim41Q5NCC3 630 aa21.56■■□□□ 1.04
Trim27-206ENSMUST00000222544 Cngb1E1AZ71 1325 aa21.5■■□□□ 1.03
Trim27-206ENSMUST00000222544 Wdr66E9Q743 1299 aa21.44■■□□□ 1.02
Trim27-206ENSMUST00000222544 Esf1Q3V1V3 845 aaKnown RBP21.41■■□□□ 1.02
Trim27-206ENSMUST00000222544 Las1lA2BE28 776 aaKnown RBP21.28■■□□□ 1
Trim27-206ENSMUST00000222544 Pcgf6Q99NA9 353 aa21.24■□□□□ 0.99
Trim27-206ENSMUST00000222544 Ccdc180J3QNE4 1664 aa21.13■□□□□ 0.97
Trim27-206ENSMUST00000222544 Abcc9P70170 1546 aa20.98■□□□□ 0.95
Trim27-206ENSMUST00000222544 HrcG5E8J6 738 aa20.95■□□□□ 0.94
Trim27-206ENSMUST00000222544 Myt1lP97500 1187 aa20.94■□□□□ 0.94
Trim27-206ENSMUST00000222544 Supt5hO55201 1082 aaKnown RBP20.9■□□□□ 0.94
Trim27-206ENSMUST00000222544 UbtfP25976 765 aaKnown RBP20.86■□□□□ 0.93
Trim27-206ENSMUST00000222544 Rtl1Q7M732 1744 aa20.79■□□□□ 0.92
Trim27-206ENSMUST00000222544 Npm2Q80W85 207 aa20.75■□□□□ 0.91
Trim27-206ENSMUST00000222544 NefmP08553 848 aa20.75■□□□□ 0.91
Trim27-206ENSMUST00000222544 Ppargc1bQ8VHJ7 1014 aa20.72■□□□□ 0.91
Trim27-206ENSMUST00000222544 Ube2uB1AUC4 352 aa20.57■□□□□ 0.88
Trim27-206ENSMUST00000222544 CenpbP27790 599 aa20.5■□□□□ 0.87
Trim27-206ENSMUST00000222544 Abcc8B2RUS7 1588 aa20.47■□□□□ 0.87
Trim27-206ENSMUST00000222544 Cdk11bP24788 784 aaKnown RBP20.42■□□□□ 0.86
Trim27-206ENSMUST00000222544 Zcchc6Q5BLK4 1491 aaKnown RBP20.4■□□□□ 0.86
Trim27-206ENSMUST00000222544 Mier1Q5UAK0 511 aa20.35■□□□□ 0.85
Trim27-206ENSMUST00000222544 Gm35339A0A140LHH9 1649 aa20.34■□□□□ 0.85
Trim27-206ENSMUST00000222544 Il27Q8K3I6 234 aa20.33■□□□□ 0.85
Trim27-206ENSMUST00000222544 Neurod1Q60867 357 aa20.32■□□□□ 0.84
Trim27-206ENSMUST00000222544 Nop58Q6DFW4 536 aaKnown RBP20.32■□□□□ 0.84
Trim27-206ENSMUST00000222544 Slc24a1Q91WD8 1130 aa20.29■□□□□ 0.84
Trim27-206ENSMUST00000222544 Sall2Q9QX96 1004 aa20.12■□□□□ 0.81
Trim27-206ENSMUST00000222544 Pelp1Q9DBD5 1123 aaKnown RBP20.11■□□□□ 0.81
Trim27-206ENSMUST00000222544 Ap3b1Q9Z1T1 1105 aa20.09■□□□□ 0.81
Trim27-206ENSMUST00000222544 Dcaf1Q80TR8 1506 aa20.06■□□□□ 0.8
Trim27-206ENSMUST00000222544 Gm38655A0A286YDK6 273 aa20.05■□□□□ 0.8
Trim27-206ENSMUST00000222544 Chic1Q8CBW7 227 aa20■□□□□ 0.79
Trim27-206ENSMUST00000222544 TonslQ6NZL6 1363 aa19.97■□□□□ 0.79
Trim27-206ENSMUST00000222544 Csrnp3P59055 597 aa19.95■□□□□ 0.79
Trim27-206ENSMUST00000222544 Fam50aQ9WV03 339 aaKnown RBP19.95■□□□□ 0.78
Trim27-206ENSMUST00000222544 Plekhg3Q4VAC9 1341 aa19.88■□□□□ 0.77
Trim27-206ENSMUST00000222544 NclP09405 707 aaKnown RBP19.87■□□□□ 0.77
Trim27-206ENSMUST00000222544 Stra8P70278 393 aa19.86■□□□□ 0.77
Trim27-206ENSMUST00000222544 Mapk8ip2Q9ERE9 830 aa19.84■□□□□ 0.77
Trim27-206ENSMUST00000222544 Ttbk1Q6PCN3 1308 aa19.83■□□□□ 0.77
Trim27-206ENSMUST00000222544 ClspnQ80YR7 1315 aa19.8■□□□□ 0.76
Trim27-206ENSMUST00000222544 Cep164Q5DU05 1446 aa19.78■□□□□ 0.76
Trim27-206ENSMUST00000222544 Eid3Q3V124 375 aa19.78■□□□□ 0.76
Trim27-206ENSMUST00000222544 Eif5bQ05D44 1216 aaKnown RBP19.75■□□□□ 0.75
Trim27-206ENSMUST00000222544 Anks4bQ8K3X6 423 aa19.72■□□□□ 0.75
Trim27-206ENSMUST00000222544 Tnnt3Q9QZ47 272 aa19.7■□□□□ 0.74
Trim27-206ENSMUST00000222544 Amer1Q7TS75 1132 aa19.68■□□□□ 0.74
Trim27-206ENSMUST00000222544 Myt1Q8CFC2 1127 aa19.64■□□□□ 0.73
Trim27-206ENSMUST00000222544 Rb1cc1Q9ESK9 1588 aa19.61■□□□□ 0.73
Trim27-206ENSMUST00000222544 Aebp2Q9Z248 504 aaKnown RBP19.59■□□□□ 0.73
Trim27-206ENSMUST00000222544 Lmod2Q3UHZ5 550 aa19.58■□□□□ 0.72
Trim27-206ENSMUST00000222544 1700123L14RikQ3V2K7 440 aa19.57■□□□□ 0.72
Trim27-206ENSMUST00000222544 Npm1Q61937 292 aaKnown RBP19.56■□□□□ 0.72
Trim27-206ENSMUST00000222544 NrdcQ8BHG1 1161 aa19.5■□□□□ 0.71
Trim27-206ENSMUST00000222544 Aplp2Q06335 707 aa19.41■□□□□ 0.7
Trim27-206ENSMUST00000222544 Clip1Q922J3 1391 aa19.38■□□□□ 0.69
Trim27-206ENSMUST00000222544 Brd4Q9ESU6 1400 aaKnown RBP19.37■□□□□ 0.69
Trim27-206ENSMUST00000222544 DiexfQ8BTT6 772 aaKnown RBP19.3■□□□□ 0.68
Trim27-206ENSMUST00000222544 Anp32aO35381 247 aa19.27■□□□□ 0.68
Trim27-206ENSMUST00000222544 4933416C03RikQ3V063 378 aa19.27■□□□□ 0.68
Trim27-206ENSMUST00000222544 Rsf1E9PWW9 1441 aaKnown RBP19.27■□□□□ 0.68
Trim27-206ENSMUST00000222544 Ifnlr1Q8CGK5 535 aa19.18■□□□□ 0.66
Trim27-206ENSMUST00000222544 Ubl4bQ9CQ84 188 aa19.17■□□□□ 0.66
Trim27-206ENSMUST00000222544 Zbtb7cQ8VCZ7 619 aa19.16■□□□□ 0.66
Trim27-206ENSMUST00000222544 Zbtb4Q5F293 982 aa19.15■□□□□ 0.66
Trim27-206ENSMUST00000222544 Baz1aO88379 1555 aa19.14■□□□□ 0.65
Trim27-206ENSMUST00000222544 NeflP08551 543 aa19.13■□□□□ 0.65
Trim27-206ENSMUST00000222544 Fam71e1A1L3C1 212 aa19.09■□□□□ 0.65
Trim27-206ENSMUST00000222544 SafbD3YXK2 937 aaKnown RBP19.09■□□□□ 0.65
Trim27-206ENSMUST00000222544 Anp32bQ9EST5 272 aaKnown RBP19.08■□□□□ 0.64
Trim27-206ENSMUST00000222544 Calr4Q3TQS0 420 aa19.07■□□□□ 0.64
Trim27-206ENSMUST00000222544 Golga3P55937 1487 aa19.03■□□□□ 0.64
Trim27-206ENSMUST00000222544 Os9Q8K2C7 672 aa19.02■□□□□ 0.64
Trim27-206ENSMUST00000222544 Ppp4r2Q0VGB7 417 aa19.02■□□□□ 0.64
Trim27-206ENSMUST00000222544 Hnrnpul2Q00PI9 745 aaKnown RBP19.01■□□□□ 0.63
Trim27-206ENSMUST00000222544 Fkbp15Q6P9Q6 1216 aaKnown RBP19.01■□□□□ 0.63
Trim27-206ENSMUST00000222544 Ccdc88bQ4QRL3 1481 aa19.01■□□□□ 0.63
Trim27-206ENSMUST00000222544 Rtl5Q5DTT4 599 aa19.01■□□□□ 0.63
Trim27-206ENSMUST00000222544 Chic2Q9D9G3 165 aa18.97■□□□□ 0.63
Trim27-206ENSMUST00000222544 Mrs2Q5NCE8 434 aa18.92■□□□□ 0.62
Trim27-206ENSMUST00000222544 BlmO88700 1416 aa18.92■□□□□ 0.62
Trim27-206ENSMUST00000222544 NacadQ5SWP3 1504 aa18.92■□□□□ 0.62
Trim27-206ENSMUST00000222544 DaxxO35613 739 aa18.91■□□□□ 0.62
Trim27-206ENSMUST00000222544 P3h3Q8CG70 732 aa18.87■□□□□ 0.61
Trim27-206ENSMUST00000222544 Kdm5dQ62240 1548 aa18.87■□□□□ 0.61
Trim27-206ENSMUST00000222544 Setd5Q5XJV7 1441 aa18.85■□□□□ 0.61
Trim27-206ENSMUST00000222544 Wdr43Q6ZQL4 677 aaKnown RBP18.83■□□□□ 0.61
Trim27-206ENSMUST00000222544 Prdm10Q3UTQ7 1184 aa18.81■□□□□ 0.6
Trim27-206ENSMUST00000222544 ArxO35085 564 aa18.77■□□□□ 0.6
Trim27-206ENSMUST00000222544 Plppr3Q7TPB0 716 aa18.77■□□□□ 0.59
Trim27-206ENSMUST00000222544 Gm13697A2AK42 830 aa18.76■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms