RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 AqrQ8CFQ3 1481 aaKnown RBP30.64■■■□□ 2.5
Scn1b-203ENSMUST00000211945 Col17a1Q07563 1470 aa30.64■■■□□ 2.49
Scn1b-203ENSMUST00000211945 Zeb1Q64318 1117 aa30.62■■■□□ 2.49
Scn1b-203ENSMUST00000211945 Carmil1Q6EDY6 1374 aa30.55■■■□□ 2.48
Scn1b-203ENSMUST00000211945 Pelp1Q9DBD5 1123 aaKnown RBP30.51■■■□□ 2.47
Scn1b-203ENSMUST00000211945 EprsQ8CGC7 1512 aaKnown RBP30.46■■■□□ 2.47
Scn1b-203ENSMUST00000211945 Adamts12Q811B3 1600 aa30.44■■■□□ 2.46
Scn1b-203ENSMUST00000211945 Clip1Q922J3 1391 aa30.41■■■□□ 2.46
Scn1b-203ENSMUST00000211945 Fgd6Q69ZL1 1399 aa30.4■■■□□ 2.46
Scn1b-203ENSMUST00000211945 WizO88286 1684 aaKnown RBP30.36■■■□□ 2.45
Scn1b-203ENSMUST00000211945 Polr1aO35134 1717 aaKnown RBP30.35■■■□□ 2.45
Scn1b-203ENSMUST00000211945 Abca16E9PWJ7 1678 aa30.35■■■□□ 2.45
Scn1b-203ENSMUST00000211945 TchhA0A0B4J1F9 1599 aa30.35■■■□□ 2.45
Scn1b-203ENSMUST00000211945 Rpap1Q80TE0 1409 aa30.3■■■□□ 2.44
Scn1b-203ENSMUST00000211945 Abcc2Q8VI47 1543 aa30.29■■■□□ 2.44
Scn1b-203ENSMUST00000211945 PxdnQ3UQ28 1475 aa30.29■■■□□ 2.44
Scn1b-203ENSMUST00000211945 CadpsQ80TJ1 1355 aa30.27■■■□□ 2.44
Scn1b-203ENSMUST00000211945 Myt1lP97500 1187 aa30.23■■■□□ 2.43
Scn1b-203ENSMUST00000211945 Dnmt1P13864 1620 aaKnown RBP30.23■■■□□ 2.43
Scn1b-203ENSMUST00000211945 Cux1P53564 1515 aa30.21■■■□□ 2.43
Scn1b-203ENSMUST00000211945 Gm7298A0A0N4SVU1 1476 aa30.21■■■□□ 2.43
Scn1b-203ENSMUST00000211945 Map3k4O08648 1597 aa30.19■■■□□ 2.42
Scn1b-203ENSMUST00000211945 Zcchc11B2RX14 1644 aaKnown RBP30.18■■■□□ 2.42
Scn1b-203ENSMUST00000211945 Soga1E1U8D0 1418 aa30.18■■■□□ 2.42
Scn1b-203ENSMUST00000211945 Abca5Q8K448 1642 aa30.15■■■□□ 2.42
Scn1b-203ENSMUST00000211945 Arhgap27A2AB59 869 aa30.15■■■□□ 2.42
Scn1b-203ENSMUST00000211945 Fyco1Q8VDC1 1437 aa30.14■■■□□ 2.42
Scn1b-203ENSMUST00000211945 AknaQ80VW7 1404 aa30.08■■■□□ 2.41
Scn1b-203ENSMUST00000211945 Abcc1O35379 1528 aa30.08■■■□□ 2.41
Scn1b-203ENSMUST00000211945 Ankrd26Q811D2 1581 aa30.08■■■□□ 2.41
Scn1b-203ENSMUST00000211945 Slx4Q6P1D7 1565 aa30.07■■■□□ 2.4
Scn1b-203ENSMUST00000211945 BC005561E9Q5E2 1589 aa30.05■■■□□ 2.4
Scn1b-203ENSMUST00000211945 Neo1P97798 1493 aa30.01■■■□□ 2.4
Scn1b-203ENSMUST00000211945 Chd1P40201 1711 aa30■■■□□ 2.39
Scn1b-203ENSMUST00000211945 Erich3F6QRE9 1637 aa29.97■■■□□ 2.39
Scn1b-203ENSMUST00000211945 Eea1Q8BL66 1411 aa29.94■■■□□ 2.38
Scn1b-203ENSMUST00000211945 Setd5Q5XJV7 1441 aa29.93■■■□□ 2.38
Scn1b-203ENSMUST00000211945 Adgrl3Q80TS3 1537 aa29.92■■■□□ 2.38
Scn1b-203ENSMUST00000211945 Gapvd1Q6PAR5 1458 aa29.91■■■□□ 2.38
Scn1b-203ENSMUST00000211945 Gm14025A2AP89 1413 aa29.91■■■□□ 2.38
Scn1b-203ENSMUST00000211945 WrnO09053 1401 aa29.9■■■□□ 2.38
Scn1b-203ENSMUST00000211945 Jph4Q80WT0 628 aa29.87■■■□□ 2.37
Scn1b-203ENSMUST00000211945 Lmo7E9PYF4 1699 aaKnown RBP29.86■■■□□ 2.37
Scn1b-203ENSMUST00000211945 Ythdc2B2RR83 1445 aaKnown RBP29.86■■■□□ 2.37
Scn1b-203ENSMUST00000211945 Cep170Q6A065 1588 aa29.85■■■□□ 2.37
Scn1b-203ENSMUST00000211945 Arhgef12Q8R4H2 1543 aaKnown RBP29.85■■■□□ 2.37
Scn1b-203ENSMUST00000211945 Gm156Q58A37 223 aa29.83■■■□□ 2.37
Scn1b-203ENSMUST00000211945 Aebp1Q640N1 1128 aa29.82■■■□□ 2.36
Scn1b-203ENSMUST00000211945 Pcdh10E9PXQ7 1057 aa29.79■■■□□ 2.36
Scn1b-203ENSMUST00000211945 BlmO88700 1416 aa29.79■■■□□ 2.36
Scn1b-203ENSMUST00000211945 Ttbk1Q6PCN3 1308 aa29.78■■■□□ 2.36
Scn1b-203ENSMUST00000211945 Arhgef5E9Q7D5 1581 aa29.77■■■□□ 2.36
Scn1b-203ENSMUST00000211945 Rrbp1Q99PL5 1605 aaKnown RBP29.76■■■□□ 2.35
Scn1b-203ENSMUST00000211945 PtprtQ99M80 1454 aa29.76■■■□□ 2.35
Scn1b-203ENSMUST00000211945 Arap1Q4LDD4 1452 aa29.75■■■□□ 2.35
Scn1b-203ENSMUST00000211945 Pcf11G3X9Z4 1553 aa29.73■■■□□ 2.35
Scn1b-203ENSMUST00000211945 Arhgap31A6X8Z5 1425 aa29.63■■■□□ 2.33
Scn1b-203ENSMUST00000211945 CntlnA2AM05 1397 aa29.63■■■□□ 2.33
Scn1b-203ENSMUST00000211945 Kdm5bQ80Y84 1544 aa29.62■■■□□ 2.33
Scn1b-203ENSMUST00000211945 Kif27Q7M6Z4 1394 aa29.62■■■□□ 2.33
Scn1b-203ENSMUST00000211945 Rapgef6Q5NCJ1 1609 aa29.6■■■□□ 2.33
Scn1b-203ENSMUST00000211945 AI481877A2ALV5 1481 aa29.59■■■□□ 2.33
Scn1b-203ENSMUST00000211945 Ap3b1Q9Z1T1 1105 aa29.57■■■□□ 2.32
Scn1b-203ENSMUST00000211945 Ccdc141E9Q8Q6 1531 aa29.56■■■□□ 2.32
Scn1b-203ENSMUST00000211945 Igf1rQ60751 1373 aa29.53■■■□□ 2.32
Scn1b-203ENSMUST00000211945 Peg3Q3URU2 1571 aa29.51■■■□□ 2.31
Scn1b-203ENSMUST00000211945 Ncoa2Q61026 1462 aa29.51■■■□□ 2.31
Scn1b-203ENSMUST00000211945 Naip1Q9QWK5 1403 aa29.49■■■□□ 2.31
Scn1b-203ENSMUST00000211945 Setbp1Q9Z180 1582 aa29.48■■■□□ 2.31
Scn1b-203ENSMUST00000211945 Tiam1Q60610 1591 aa29.48■■■□□ 2.31
Scn1b-203ENSMUST00000211945 Mroh2aD3Z750 1679 aa29.47■■■□□ 2.31
Scn1b-203ENSMUST00000211945 Pprc1Q6NZN1 1644 aa29.46■■■□□ 2.31
Scn1b-203ENSMUST00000211945 Fkbp15Q6P9Q6 1216 aaKnown RBP29.45■■■□□ 2.31
Scn1b-203ENSMUST00000211945 Arhgef11Q68FM7 1552 aa29.44■■■□□ 2.3
Scn1b-203ENSMUST00000211945 NhsB1AV60 1647 aa29.44■■■□□ 2.3
Scn1b-203ENSMUST00000211945 Gm1043A0A140LJC2 1431 aa29.44■■■□□ 2.3
Scn1b-203ENSMUST00000211945 Cul7Q8VE73 1689 aa29.42■■■□□ 2.3
Scn1b-203ENSMUST00000211945 Gcc2Q8CHG3 1679 aa29.4■■■□□ 2.3
Scn1b-203ENSMUST00000211945 Magi1Q6RHR9 1471 aa29.39■■■□□ 2.29
Scn1b-203ENSMUST00000211945 Kiaa1210E9Q0C6 1637 aa29.38■■■□□ 2.29
Scn1b-203ENSMUST00000211945 Ncoa3O09000 1398 aa29.37■■■□□ 2.29
Scn1b-203ENSMUST00000211945 Fam163aQ8CAA5 168 aa29.37■■■□□ 2.29
Scn1b-203ENSMUST00000211945 Fancd2Q80V62 1450 aa29.36■■■□□ 2.29
Scn1b-203ENSMUST00000211945 Mug1P28665 1476 aa29.35■■■□□ 2.29
Scn1b-203ENSMUST00000211945 Lrrc9Q8CDN9 1456 aa29.34■■■□□ 2.29
Scn1b-203ENSMUST00000211945 Ak9G3UYQ4 1894 aa29.33■■■□□ 2.29
Scn1b-203ENSMUST00000211945 Kiaa1551Q5DTW7 1521 aa29.3■■■□□ 2.28
Scn1b-203ENSMUST00000211945 Wdr7Q920I9 1489 aa29.29■■■□□ 2.28
Scn1b-203ENSMUST00000211945 Dhx57Q6P5D3 1388 aaKnown RBP29.29■■■□□ 2.28
Scn1b-203ENSMUST00000211945 Cdc42bpaQ3UU96 1719 aa29.27■■■□□ 2.28
Scn1b-203ENSMUST00000211945 Mapkbp1Q6NS57 1503 aa29.26■■■□□ 2.27
Scn1b-203ENSMUST00000211945 Atp10dQ8K2X1 1416 aa29.24■■■□□ 2.27
Scn1b-203ENSMUST00000211945 Znf608Q56A10 1511 aa29.24■■■□□ 2.27
Scn1b-203ENSMUST00000211945 Ppp1r18Q8BQ30 594 aa29.24■■■□□ 2.27
Scn1b-203ENSMUST00000211945 Plekhg3Q4VAC9 1341 aa29.23■■■□□ 2.27
Scn1b-203ENSMUST00000211945 Lmod2Q3UHZ5 550 aa29.22■■■□□ 2.27
Scn1b-203ENSMUST00000211945 Prex2Q3LAC4 1598 aa29.22■■■□□ 2.27
Scn1b-203ENSMUST00000211945 Ifnlr1Q8CGK5 535 aa29.21■■■□□ 2.27
Scn1b-203ENSMUST00000211945 Abca8bQ8K440 1620 aa29.2■■■□□ 2.27
Scn1b-203ENSMUST00000211945 Clasp1Q80TV8 1535 aaKnown RBP29.17■■■□□ 2.26
Retrieved 100 of 22,080 RNA–protein pairs in 8.2 ms