RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 BlmO88700 1416 aa12.54□□□□□ -0.4
Scn8a-213ENSMUST00000201549 Kdm5dQ62240 1548 aa12.53□□□□□ -0.4
Scn8a-213ENSMUST00000201549 Irx6Q9ER75 438 aa12.52□□□□□ -0.4
Scn8a-213ENSMUST00000201549 Nlrp6Q91WS2 869 aa12.52□□□□□ -0.41
Scn8a-213ENSMUST00000201549 Fam71e1A1L3C1 212 aa12.52□□□□□ -0.41
Scn8a-213ENSMUST00000201549 Safb2Q80YR5 991 aaKnown RBP12.49□□□□□ -0.41
Scn8a-213ENSMUST00000201549 Setd5Q5XJV7 1441 aa12.45□□□□□ -0.42
Scn8a-213ENSMUST00000201549 Clstn1Q9EPL2 979 aa12.45□□□□□ -0.42
Scn8a-213ENSMUST00000201549 Fkbp15Q6P9Q6 1216 aaKnown RBP12.44□□□□□ -0.42
Scn8a-213ENSMUST00000201549 Mrs2Q5NCE8 434 aa12.44□□□□□ -0.42
Scn8a-213ENSMUST00000201549 Ccdc88bQ4QRL3 1481 aa12.43□□□□□ -0.42
Scn8a-213ENSMUST00000201549 Ccer2J3QPU5 274 aa12.42□□□□□ -0.42
Scn8a-213ENSMUST00000201549 SafbD3YXK2 937 aaKnown RBP12.42□□□□□ -0.42
Scn8a-213ENSMUST00000201549 Wdr43Q6ZQL4 677 aaKnown RBP12.41□□□□□ -0.42
Scn8a-213ENSMUST00000201549 Bcl11aQ9QYE3 773 aa12.41□□□□□ -0.42
Scn8a-213ENSMUST00000201549 Rad21Q61550 635 aaKnown RBP12.4□□□□□ -0.42
Scn8a-213ENSMUST00000201549 P3h3Q8CG70 732 aa12.4□□□□□ -0.42
Scn8a-213ENSMUST00000201549 Arid4bA2CG63 1314 aaKnown RBP12.39□□□□□ -0.43
Scn8a-213ENSMUST00000201549 Ubl4bQ9CQ84 188 aa12.37□□□□□ -0.43
Scn8a-213ENSMUST00000201549 Hsp90aa1P07901 733 aaKnown RBP12.36□□□□□ -0.43
Scn8a-213ENSMUST00000201549 DekQ7TNV0 380 aaKnown RBP12.35□□□□□ -0.43
Scn8a-213ENSMUST00000201549 Rtn4Q99P72 1162 aaKnown RBP12.34□□□□□ -0.43
Scn8a-213ENSMUST00000201549 Taok2Q6ZQ29 1240 aa12.34□□□□□ -0.43
Scn8a-213ENSMUST00000201549 Trim26Q99PN3 545 aa12.33□□□□□ -0.44
Scn8a-213ENSMUST00000201549 Eea1Q8BL66 1411 aa12.33□□□□□ -0.44
Scn8a-213ENSMUST00000201549 Znf316Q6PGE4 1016 aa12.32□□□□□ -0.44
Scn8a-213ENSMUST00000201549 Upf2A2AT37 1269 aaKnown RBP12.32□□□□□ -0.44
Scn8a-213ENSMUST00000201549 Hdac5Q9Z2V6 1113 aa12.31□□□□□ -0.44
Scn8a-213ENSMUST00000201549 Prm3Q62100 101 aa12.3□□□□□ -0.44
Scn8a-213ENSMUST00000201549 Rgl3Q3UYI5 709 aa12.27□□□□□ -0.44
Scn8a-213ENSMUST00000201549 Kif15Q6P9L6 1387 aa12.27□□□□□ -0.45
Scn8a-213ENSMUST00000201549 Znf326O88291 580 aa12.23□□□□□ -0.45
Scn8a-213ENSMUST00000201549 Hspa5P20029 655 aaKnown RBP12.23□□□□□ -0.45
Scn8a-213ENSMUST00000201549 Slc4a1apE9PX68 744 aa12.23□□□□□ -0.45
Scn8a-213ENSMUST00000201549 Ofd1Q80Z25 1017 aa12.22□□□□□ -0.45
Scn8a-213ENSMUST00000201549 Cep162Q6ZQ06 1403 aa12.21□□□□□ -0.46
Scn8a-213ENSMUST00000201549 Grwd1Q810D6 446 aaKnown RBP12.2□□□□□ -0.46
Scn8a-213ENSMUST00000201549 Ecm2Q5FW85 670 aa12.18□□□□□ -0.46
Scn8a-213ENSMUST00000201549 Slc4a3P16283 1227 aa12.17□□□□□ -0.46
Scn8a-213ENSMUST00000201549 Smarca2Q6DIC0 1577 aa12.16□□□□□ -0.46
Scn8a-213ENSMUST00000201549 Q8BT18 775 aa12.15□□□□□ -0.46
Scn8a-213ENSMUST00000201549 Cecr2E9Q2Z1 1453 aa12.15□□□□□ -0.47
Scn8a-213ENSMUST00000201549 Wwc2Q6NXJ0 1187 aa12.15□□□□□ -0.47
Scn8a-213ENSMUST00000201549 ScribQ80U72 1612 aa12.14□□□□□ -0.47
Scn8a-213ENSMUST00000201549 Synj1Q8CHC4 1574 aa12.14□□□□□ -0.47
Scn8a-213ENSMUST00000201549 Sin3aQ60520 1274 aaKnown RBP12.14□□□□□ -0.47
Scn8a-213ENSMUST00000201549 Ccdc18Q640L5 1455 aa12.13□□□□□ -0.47
Scn8a-213ENSMUST00000201549 Fmn1Q05860 1466 aa12.13□□□□□ -0.47
Scn8a-213ENSMUST00000201549 MyclP10166 368 aa12.13□□□□□ -0.47
Scn8a-213ENSMUST00000201549 CanxP35564 591 aaKnown RBP12.12□□□□□ -0.47
Scn8a-213ENSMUST00000201549 Apbb1Q9QXJ1 710 aa12.12□□□□□ -0.47
Scn8a-213ENSMUST00000201549 Card11Q8CIS0 1159 aa12.11□□□□□ -0.47
Scn8a-213ENSMUST00000201549 Rapgef2Q8CHG7 1496 aa12.09□□□□□ -0.47
Scn8a-213ENSMUST00000201549 Trim30dE9PWL0 497 aa12.08□□□□□ -0.48
Scn8a-213ENSMUST00000201549 Sycp2Q9CUU3 1500 aa12.07□□□□□ -0.48
Scn8a-213ENSMUST00000201549 BccipQ9CWI3 316 aa12.07□□□□□ -0.48
Scn8a-213ENSMUST00000201549 Fgd1P52734 960 aa12.07□□□□□ -0.48
Scn8a-213ENSMUST00000201549 Dbr1Q923B1 550 aa12.07□□□□□ -0.48
Scn8a-213ENSMUST00000201549 Mia2Q91ZV0 1396 aa12.07□□□□□ -0.48
Scn8a-213ENSMUST00000201549 Kdm2aP59997 1161 aa12.06□□□□□ -0.48
Scn8a-213ENSMUST00000201549 Arhgap27A2AB59 869 aa12.05□□□□□ -0.48
Scn8a-213ENSMUST00000201549 Hsp90ab1P11499 724 aaKnown RBP12.05□□□□□ -0.48
Scn8a-213ENSMUST00000201549 Ccdc27Q3V036 639 aa12.04□□□□□ -0.48
Scn8a-213ENSMUST00000201549 Neurod2Q62414 383 aa12.04□□□□□ -0.48
Scn8a-213ENSMUST00000201549 Ercc6F8VPZ5 1481 aa12.04□□□□□ -0.48
Scn8a-213ENSMUST00000201549 Ubap1lG3UW59 384 aa12.03□□□□□ -0.48
Scn8a-213ENSMUST00000201549 B4galnt3Q6L8S8 986 aa12.03□□□□□ -0.48
Scn8a-213ENSMUST00000201549 CftrP26361 1476 aa12.03□□□□□ -0.48
Scn8a-213ENSMUST00000201549 Clstn2Q9ER65 966 aa12.03□□□□□ -0.48
Scn8a-213ENSMUST00000201549 Cc2d2aQ8CFW7 1633 aa12.02□□□□□ -0.49
Scn8a-213ENSMUST00000201549 Tnnt2P50752 301 aa12.01□□□□□ -0.49
Scn8a-213ENSMUST00000201549 Crybg2B7ZCC2 1516 aa12.01□□□□□ -0.49
Scn8a-213ENSMUST00000201549 Baz1bQ9Z277 1479 aa12.01□□□□□ -0.49
Scn8a-213ENSMUST00000201549 Exoc6Q8R313 802 aa12.01□□□□□ -0.49
Scn8a-213ENSMUST00000201549 Cwc22Q8C5N3 908 aaKnown RBP12.01□□□□□ -0.49
Scn8a-213ENSMUST00000201549 NgefQ8CHT1 710 aa12.01□□□□□ -0.49
Scn8a-213ENSMUST00000201549 IbspQ61711 324 aa12□□□□□ -0.49
Scn8a-213ENSMUST00000201549 Ggt6Q6PDE7 497 aa12□□□□□ -0.49
Scn8a-213ENSMUST00000201549 Mtus2Q3UHD3 1353 aa11.99□□□□□ -0.49
Scn8a-213ENSMUST00000201549 Supt16hQ920B9 1047 aa11.99□□□□□ -0.49
Scn8a-213ENSMUST00000201549 Nolc1E9Q5C9 702 aaKnown RBP11.99□□□□□ -0.49
Scn8a-213ENSMUST00000201549 Spryd3E9Q9B3 442 aa11.98□□□□□ -0.49
Scn8a-213ENSMUST00000201549 Pkd2O35245 966 aa11.97□□□□□ -0.49
Scn8a-213ENSMUST00000201549 Armcx1Q9CX83 456 aa11.97□□□□□ -0.49
Scn8a-213ENSMUST00000201549 Ccdc9Q8VC31 543 aaKnown RBP11.97□□□□□ -0.49
Scn8a-213ENSMUST00000201549 Arhgap35Q91YM2 1499 aa11.96□□□□□ -0.49
Scn8a-213ENSMUST00000201549 Mroh3A0A1D5RM54 893 aa11.96□□□□□ -0.49
Scn8a-213ENSMUST00000201549 Aebp1Q640N1 1128 aa11.96□□□□□ -0.49
Scn8a-213ENSMUST00000201549 Rrp7aQ9D1C9 280 aaKnown RBP11.96□□□□□ -0.49
Scn8a-213ENSMUST00000201549 Rundc1Q0VDN7 615 aa11.96□□□□□ -0.49
Scn8a-213ENSMUST00000201549 PtmaP26350 111 aa11.95□□□□□ -0.5
Scn8a-213ENSMUST00000201549 Pknox2Q8BG99 474 aa11.94□□□□□ -0.5
Scn8a-213ENSMUST00000201549 Ncbp3Q8BZR9 615 aaKnown RBP11.94□□□□□ -0.5
Scn8a-213ENSMUST00000201549 Cttnbp2B9EJA2 1648 aa11.94□□□□□ -0.5
Scn8a-213ENSMUST00000201549 Mphosph9A6H5Y1 991 aa11.94□□□□□ -0.5
Scn8a-213ENSMUST00000201549 Fyco1Q8VDC1 1437 aa11.93□□□□□ -0.5
Scn8a-213ENSMUST00000201549 Trim44Q9QXA7 346 aa11.92□□□□□ -0.5
Scn8a-213ENSMUST00000201549 PrkcshO08795 521 aa11.91□□□□□ -0.5
Scn8a-213ENSMUST00000201549 Gm20521D3Z5F7 333 aa11.91□□□□□ -0.5
Scn8a-213ENSMUST00000201549 Noc3lQ8VI84 807 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 173.4 ms