RNA–Protein interactions for RNA: ENSMUST00000197984.4

Smarcc1-204, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-204ENSMUST00000197984 Supt16hQ920B9 1047 aa21.88■■□□□ 1.09
Smarcc1-204ENSMUST00000197984 Rtl5Q5DTT4 599 aa21.84■■□□□ 1.09
Smarcc1-204ENSMUST00000197984 P3h3Q8CG70 732 aa21.79■■□□□ 1.08
Smarcc1-204ENSMUST00000197984 Ube2uB1AUC4 352 aa21.78■■□□□ 1.08
Smarcc1-204ENSMUST00000197984 Frmpd1A2AKB4 1549 aa21.78■■□□□ 1.08
Smarcc1-204ENSMUST00000197984 Ercc6F8VPZ5 1481 aa21.76■■□□□ 1.07
Smarcc1-204ENSMUST00000197984 Wdr43Q6ZQL4 677 aaKnown RBP21.73■■□□□ 1.07
Smarcc1-204ENSMUST00000197984 Hdac5Q9Z2V6 1113 aa21.68■■□□□ 1.06
Smarcc1-204ENSMUST00000197984 Ubl4bQ9CQ84 188 aa21.67■■□□□ 1.06
Smarcc1-204ENSMUST00000197984 Slc4a3P16283 1227 aa21.66■■□□□ 1.06
Smarcc1-204ENSMUST00000197984 PtprkP35822 1457 aa21.65■■□□□ 1.06
Smarcc1-204ENSMUST00000197984 Npm1Q61937 292 aaKnown RBP21.65■■□□□ 1.06
Smarcc1-204ENSMUST00000197984 Wdr62Q3U3T8 1523 aa21.65■■□□□ 1.06
Smarcc1-204ENSMUST00000197984 Pak3Q61036 559 aa21.63■■□□□ 1.05
Smarcc1-204ENSMUST00000197984 Lmod2Q3UHZ5 550 aa21.62■■□□□ 1.05
Smarcc1-204ENSMUST00000197984 Rpap1Q80TE0 1409 aa21.61■■□□□ 1.05
Smarcc1-204ENSMUST00000197984 Sin3aQ60520 1274 aaKnown RBP21.6■■□□□ 1.05
Smarcc1-204ENSMUST00000197984 Ncapd3Q6ZQK0 1506 aa21.57■■□□□ 1.04
Smarcc1-204ENSMUST00000197984 Setd5Q5XJV7 1441 aa21.57■■□□□ 1.04
Smarcc1-204ENSMUST00000197984 Hspa5P20029 655 aaKnown RBP21.56■■□□□ 1.04
Smarcc1-204ENSMUST00000197984 Arhgap35Q91YM2 1499 aa21.53■■□□□ 1.04
Smarcc1-204ENSMUST00000197984 Ccdc18Q640L5 1455 aa21.52■■□□□ 1.04
Smarcc1-204ENSMUST00000197984 Eea1Q8BL66 1411 aa21.52■■□□□ 1.04
Smarcc1-204ENSMUST00000197984 4933416C03RikQ3V063 378 aa21.49■■□□□ 1.03
Smarcc1-204ENSMUST00000197984 TnnQ80Z71 1560 aa21.48■■□□□ 1.03
Smarcc1-204ENSMUST00000197984 Mrs2Q5NCE8 434 aa21.47■■□□□ 1.03
Smarcc1-204ENSMUST00000197984 Lamc3Q9R0B6 1581 aa21.45■■□□□ 1.02
Smarcc1-204ENSMUST00000197984 Cux2P70298 1426 aa21.44■■□□□ 1.02
Smarcc1-204ENSMUST00000197984 Upf2A2AT37 1269 aaKnown RBP21.43■■□□□ 1.02
Smarcc1-204ENSMUST00000197984 NrdcQ8BHG1 1161 aa21.42■■□□□ 1.02
Smarcc1-204ENSMUST00000197984 Shroom4Q1W617 1475 aa21.4■■□□□ 1.02
Smarcc1-204ENSMUST00000197984 Phldb1Q6PDH0 1371 aaKnown RBP21.4■■□□□ 1.02
Smarcc1-204ENSMUST00000197984 Ccdc27Q3V036 639 aa21.39■■□□□ 1.01
Smarcc1-204ENSMUST00000197984 Camsap1A2AHC3 1581 aa21.39■■□□□ 1.01
Smarcc1-204ENSMUST00000197984 Baz1bQ9Z277 1479 aa21.38■■□□□ 1.01
Smarcc1-204ENSMUST00000197984 BlmO88700 1416 aa21.38■■□□□ 1.01
Smarcc1-204ENSMUST00000197984 DaxxO35613 739 aa21.37■■□□□ 1.01
Smarcc1-204ENSMUST00000197984 Arap1Q4LDD4 1452 aa21.36■■□□□ 1.01
Smarcc1-204ENSMUST00000197984 Plcd4Q8K3R3 807 aa21.36■■□□□ 1.01
Smarcc1-204ENSMUST00000197984 NrkQ9R0G8 1455 aa21.36■■□□□ 1.01
Smarcc1-204ENSMUST00000197984 Wwc2Q6NXJ0 1187 aa21.34■■□□□ 1.01
Smarcc1-204ENSMUST00000197984 Eif4g1Q6NZJ6 1600 aaKnown RBP21.32■■□□□ 1
Smarcc1-204ENSMUST00000197984 Gtf3c3Q3TMP1 882 aa21.32■■□□□ 1
Smarcc1-204ENSMUST00000197984 Grin2bQ01097 1482 aa21.31■■□□□ 1
Smarcc1-204ENSMUST00000197984 Gm13697A2AK42 830 aa21.31■■□□□ 1
Smarcc1-204ENSMUST00000197984 Liat1Q810M6 228 aa21.26■□□□□ 0.99
Smarcc1-204ENSMUST00000197984 Unc13aQ4KUS2 1712 aa21.25■□□□□ 0.99
Smarcc1-204ENSMUST00000197984 Hsp90aa1P07901 733 aaKnown RBP21.24■□□□□ 0.99
Smarcc1-204ENSMUST00000197984 Washc2Q6PGL7 1334 aa21.24■□□□□ 0.99
Smarcc1-204ENSMUST00000197984 Irx3P81067 507 aa21.22■□□□□ 0.99
Smarcc1-204ENSMUST00000197984 LrpprcQ6PB66 1392 aaKnown RBP21.22■□□□□ 0.99
Smarcc1-204ENSMUST00000197984 Smg6P61406 1418 aaKnown RBP21.22■□□□□ 0.99
Smarcc1-204ENSMUST00000197984 Kcnh8P59111 1102 aa21.21■□□□□ 0.99
Smarcc1-204ENSMUST00000197984 Mroh2bQ7M6Y6 1581 aa21.2■□□□□ 0.98
Smarcc1-204ENSMUST00000197984 Ccer2J3QPU5 274 aa21.19■□□□□ 0.98
Smarcc1-204ENSMUST00000197984 Chic2Q9D9G3 165 aa21.18■□□□□ 0.98
Smarcc1-204ENSMUST00000197984 Arhgef5E9Q7D5 1581 aa21.17■□□□□ 0.98
Smarcc1-204ENSMUST00000197984 Egfem1Q8C088 590 aa21.16■□□□□ 0.98
Smarcc1-204ENSMUST00000197984 Map3k1P53349 1493 aa21.15■□□□□ 0.98
Smarcc1-204ENSMUST00000197984 ChgaP26339 463 aaKnown RBP21.15■□□□□ 0.98
Smarcc1-204ENSMUST00000197984 Exoc6Q8R313 802 aa21.13■□□□□ 0.97
Smarcc1-204ENSMUST00000197984 AqrQ8CFQ3 1481 aaKnown RBP21.12■□□□□ 0.97
Smarcc1-204ENSMUST00000197984 Duox2A2AQ99 1517 aa21.1■□□□□ 0.97
Smarcc1-204ENSMUST00000197984 Arhgap27A2AB59 869 aa21.1■□□□□ 0.97
Smarcc1-204ENSMUST00000197984 Ipo9Q91YE6 1041 aa21.09■□□□□ 0.97
Smarcc1-204ENSMUST00000197984 Naip1Q9QWK5 1403 aa21.09■□□□□ 0.97
Smarcc1-204ENSMUST00000197984 Carmil1Q6EDY6 1374 aa21.09■□□□□ 0.97
Smarcc1-204ENSMUST00000197984 Dhx29Q6PGC1 1365 aaKnown RBP21.08■□□□□ 0.97
Smarcc1-204ENSMUST00000197984 Slc4a2P13808 1237 aaKnown RBP21.08■□□□□ 0.96
Smarcc1-204ENSMUST00000197984 Efcab5A0JP43 1406 aa21.07■□□□□ 0.96
Smarcc1-204ENSMUST00000197984 Ofd1Q80Z25 1017 aa21.06■□□□□ 0.96
Smarcc1-204ENSMUST00000197984 PogzQ8BZH4 1409 aaKnown RBP21.05■□□□□ 0.96
Smarcc1-204ENSMUST00000197984 Aebp1Q640N1 1128 aa21.04■□□□□ 0.96
Smarcc1-204ENSMUST00000197984 Rad54l2Q99NG0 1466 aa21.03■□□□□ 0.96
Smarcc1-204ENSMUST00000197984 Thoc2B1AZI6 1594 aaKnown RBP21.02■□□□□ 0.96
Smarcc1-204ENSMUST00000197984 Tiam1Q60610 1591 aa21.02■□□□□ 0.96
Smarcc1-204ENSMUST00000197984 Ankrd26Q811D2 1581 aa21.01■□□□□ 0.95
Smarcc1-204ENSMUST00000197984 Cux1P53564 1515 aa21■□□□□ 0.95
Smarcc1-204ENSMUST00000197984 Kdm5bQ80Y84 1544 aa20.99■□□□□ 0.95
Smarcc1-204ENSMUST00000197984 Zbtb7cQ8VCZ7 619 aa20.99■□□□□ 0.95
Smarcc1-204ENSMUST00000197984 Fgd1P52734 960 aa20.98■□□□□ 0.95
Smarcc1-204ENSMUST00000197984 Pknox2Q8BG99 474 aa20.98■□□□□ 0.95
Smarcc1-204ENSMUST00000197984 Pcf11G3X9Z4 1553 aa20.98■□□□□ 0.95
Smarcc1-204ENSMUST00000197984 Tcerg1Q8CGF7 1100 aaKnown RBP20.96■□□□□ 0.95
Smarcc1-204ENSMUST00000197984 CntlnA2AM05 1397 aa20.96■□□□□ 0.95
Smarcc1-204ENSMUST00000197984 Dnajc5bQ9CQ94 199 aa20.95■□□□□ 0.94
Smarcc1-204ENSMUST00000197984 Zbtb4Q5F293 982 aa20.95■□□□□ 0.94
Smarcc1-204ENSMUST00000197984 Slx4Q6P1D7 1565 aa20.93■□□□□ 0.94
Smarcc1-204ENSMUST00000197984 NeflP08551 543 aa20.93■□□□□ 0.94
Smarcc1-204ENSMUST00000197984 Ccdc9Q8VC31 543 aaKnown RBP20.92■□□□□ 0.94
Smarcc1-204ENSMUST00000197984 ArxO35085 564 aa20.92■□□□□ 0.94
Smarcc1-204ENSMUST00000197984 Rad21Q61550 635 aaKnown RBP20.91■□□□□ 0.94
Smarcc1-204ENSMUST00000197984 CanxP35564 591 aaKnown RBP20.89■□□□□ 0.94
Smarcc1-204ENSMUST00000197984 Iqcf3Q9D498 203 aa20.89■□□□□ 0.94
Smarcc1-204ENSMUST00000197984 B4galnt3Q6L8S8 986 aa20.88■□□□□ 0.93
Smarcc1-204ENSMUST00000197984 Fyco1Q8VDC1 1437 aa20.87■□□□□ 0.93
Smarcc1-204ENSMUST00000197984 UacaQ8CGB3 1411 aa20.86■□□□□ 0.93
Smarcc1-204ENSMUST00000197984 Fam135aQ6NS59 1506 aa20.85■□□□□ 0.93
Smarcc1-204ENSMUST00000197984 Samd9lQ69Z37 1561 aa20.85■□□□□ 0.93
Smarcc1-204ENSMUST00000197984 Dbr1Q923B1 550 aa20.84■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms