RNA–Protein interactions for RNA: ENSMUST00000197984.4

Smarcc1-204, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-204ENSMUST00000197984 NischQ80TM9 1593 aa27.8■■■□□ 2.04
Smarcc1-204ENSMUST00000197984 Rhox8Q6VSS7 320 aa26.82■■□□□ 1.88
Smarcc1-204ENSMUST00000197984 Abcc9P70170 1546 aa26.8■■□□□ 1.88
Smarcc1-204ENSMUST00000197984 Gm35339A0A140LHH9 1649 aa26.76■■□□□ 1.88
Smarcc1-204ENSMUST00000197984 Rpgrip1Q9EPQ2 1331 aa26.31■■□□□ 1.8
Smarcc1-204ENSMUST00000197984 Ehmt2Q9Z148 1263 aaKnown RBP26.29■■□□□ 1.8
Smarcc1-204ENSMUST00000197984 Abcc8B2RUS7 1588 aa26.28■■□□□ 1.8
Smarcc1-204ENSMUST00000197984 Acin1Q9JIX8 1338 aaKnown RBP25.72■■□□□ 1.71
Smarcc1-204ENSMUST00000197984 Pcgf6Q99NA9 353 aa25.57■■□□□ 1.68
Smarcc1-204ENSMUST00000197984 Ccdc180J3QNE4 1664 aa25.24■■□□□ 1.63
Smarcc1-204ENSMUST00000197984 Rtl1Q7M732 1744 aa25.05■■□□□ 1.6
Smarcc1-204ENSMUST00000197984 Supt5hO55201 1082 aaKnown RBP24.99■■□□□ 1.59
Smarcc1-204ENSMUST00000197984 Ccdc136Q3TVA9 1136 aa24.73■■□□□ 1.55
Smarcc1-204ENSMUST00000197984 Neurod1Q60867 357 aa24.72■■□□□ 1.55
Smarcc1-204ENSMUST00000197984 Zeb1Q64318 1117 aa24.68■■□□□ 1.54
Smarcc1-204ENSMUST00000197984 ScribQ80U72 1612 aa24.49■■□□□ 1.51
Smarcc1-204ENSMUST00000197984 HrcG5E8J6 738 aa24.39■■□□□ 1.5
Smarcc1-204ENSMUST00000197984 Rb1cc1Q9ESK9 1588 aa24.37■■□□□ 1.49
Smarcc1-204ENSMUST00000197984 Las1lA2BE28 776 aaKnown RBP24.35■■□□□ 1.49
Smarcc1-204ENSMUST00000197984 Trim41Q5NCC3 630 aa24.33■■□□□ 1.49
Smarcc1-204ENSMUST00000197984 Dcaf1Q80TR8 1506 aa24.32■■□□□ 1.48
Smarcc1-204ENSMUST00000197984 Zcchc6Q5BLK4 1491 aaKnown RBP24.28■■□□□ 1.48
Smarcc1-204ENSMUST00000197984 Cngb1E1AZ71 1325 aa24.24■■□□□ 1.47
Smarcc1-204ENSMUST00000197984 Kdm5dQ62240 1548 aa24.17■■□□□ 1.46
Smarcc1-204ENSMUST00000197984 Csrnp3P59055 597 aa24.06■■□□□ 1.44
Smarcc1-204ENSMUST00000197984 1700123L14RikQ3V2K7 440 aa24.04■■□□□ 1.44
Smarcc1-204ENSMUST00000197984 Gab3Q8BSM5 595 aa23.98■■□□□ 1.43
Smarcc1-204ENSMUST00000197984 Sall2Q9QX96 1004 aa23.98■■□□□ 1.43
Smarcc1-204ENSMUST00000197984 Baz1aO88379 1555 aa23.97■■□□□ 1.43
Smarcc1-204ENSMUST00000197984 NacadQ5SWP3 1504 aa23.95■■□□□ 1.42
Smarcc1-204ENSMUST00000197984 Wdr66E9Q743 1299 aa23.92■■□□□ 1.42
Smarcc1-204ENSMUST00000197984 Ppargc1bQ8VHJ7 1014 aa23.9■■□□□ 1.42
Smarcc1-204ENSMUST00000197984 Gm38655A0A286YDK6 273 aa23.85■■□□□ 1.41
Smarcc1-204ENSMUST00000197984 Mier1Q5UAK0 511 aa23.72■■□□□ 1.39
Smarcc1-204ENSMUST00000197984 CenpbP27790 599 aa23.7■■□□□ 1.38
Smarcc1-204ENSMUST00000197984 NefmP08553 848 aa23.68■■□□□ 1.38
Smarcc1-204ENSMUST00000197984 Anks4bQ8K3X6 423 aa23.67■■□□□ 1.38
Smarcc1-204ENSMUST00000197984 Cdk11bP24788 784 aaKnown RBP23.51■■□□□ 1.35
Smarcc1-204ENSMUST00000197984 Nop58Q6DFW4 536 aaKnown RBP23.46■■□□□ 1.35
Smarcc1-204ENSMUST00000197984 Aebp2Q9Z248 504 aaKnown RBP23.41■■□□□ 1.34
Smarcc1-204ENSMUST00000197984 Sycp2Q9CUU3 1500 aa23.39■■□□□ 1.34
Smarcc1-204ENSMUST00000197984 UbtfP25976 765 aaKnown RBP23.38■■□□□ 1.33
Smarcc1-204ENSMUST00000197984 Smarca2Q6DIC0 1577 aa23.35■■□□□ 1.33
Smarcc1-204ENSMUST00000197984 Esf1Q3V1V3 845 aaKnown RBP23.32■■□□□ 1.32
Smarcc1-204ENSMUST00000197984 Crybg2B7ZCC2 1516 aa23.29■■□□□ 1.32
Smarcc1-204ENSMUST00000197984 Chic1Q8CBW7 227 aa23.28■■□□□ 1.32
Smarcc1-204ENSMUST00000197984 Aplp2Q06335 707 aa23.27■■□□□ 1.32
Smarcc1-204ENSMUST00000197984 Cep164Q5DU05 1446 aa23.26■■□□□ 1.31
Smarcc1-204ENSMUST00000197984 DiexfQ8BTT6 772 aaKnown RBP23.23■■□□□ 1.31
Smarcc1-204ENSMUST00000197984 Myt1Q8CFC2 1127 aa23.22■■□□□ 1.31
Smarcc1-204ENSMUST00000197984 Cecr2E9Q2Z1 1453 aa23.12■■□□□ 1.29
Smarcc1-204ENSMUST00000197984 Brd4Q9ESU6 1400 aaKnown RBP23.09■■□□□ 1.29
Smarcc1-204ENSMUST00000197984 Mapk8ip2Q9ERE9 830 aa23.08■■□□□ 1.28
Smarcc1-204ENSMUST00000197984 ClspnQ80YR7 1315 aa23.03■■□□□ 1.28
Smarcc1-204ENSMUST00000197984 Rsf1E9PWW9 1441 aaKnown RBP22.96■■□□□ 1.27
Smarcc1-204ENSMUST00000197984 Fam71e1A1L3C1 212 aa22.94■■□□□ 1.26
Smarcc1-204ENSMUST00000197984 SafbD3YXK2 937 aaKnown RBP22.93■■□□□ 1.26
Smarcc1-204ENSMUST00000197984 Bcl11aQ9QYE3 773 aa22.91■■□□□ 1.26
Smarcc1-204ENSMUST00000197984 Myt1lP97500 1187 aa22.87■■□□□ 1.25
Smarcc1-204ENSMUST00000197984 BicraF8VPZ9 1578 aa22.85■■□□□ 1.25
Smarcc1-204ENSMUST00000197984 Ccdc88bQ4QRL3 1481 aa22.82■■□□□ 1.24
Smarcc1-204ENSMUST00000197984 Ap3b1Q9Z1T1 1105 aa22.82■■□□□ 1.24
Smarcc1-204ENSMUST00000197984 Golga3P55937 1487 aa22.81■■□□□ 1.24
Smarcc1-204ENSMUST00000197984 Synj1Q8CHC4 1574 aa22.81■■□□□ 1.24
Smarcc1-204ENSMUST00000197984 TonslQ6NZL6 1363 aa22.79■■□□□ 1.24
Smarcc1-204ENSMUST00000197984 Hnrnpul2Q00PI9 745 aaKnown RBP22.75■■□□□ 1.23
Smarcc1-204ENSMUST00000197984 CftrP26361 1476 aa22.69■■□□□ 1.22
Smarcc1-204ENSMUST00000197984 Ifnlr1Q8CGK5 535 aa22.59■■□□□ 1.21
Smarcc1-204ENSMUST00000197984 Eid3Q3V124 375 aa22.56■■□□□ 1.2
Smarcc1-204ENSMUST00000197984 PrkcshO08795 521 aa22.51■■□□□ 1.19
Smarcc1-204ENSMUST00000197984 Plekhg3Q4VAC9 1341 aa22.49■■□□□ 1.19
Smarcc1-204ENSMUST00000197984 Npm2Q80W85 207 aa22.48■■□□□ 1.19
Smarcc1-204ENSMUST00000197984 Ttbk1Q6PCN3 1308 aa22.45■■□□□ 1.18
Smarcc1-204ENSMUST00000197984 Tnnt3Q9QZ47 272 aa22.44■■□□□ 1.18
Smarcc1-204ENSMUST00000197984 Slc24a1Q91WD8 1130 aa22.42■■□□□ 1.18
Smarcc1-204ENSMUST00000197984 Smarca4Q3TKT4 1613 aaKnown RBP22.41■■□□□ 1.18
Smarcc1-204ENSMUST00000197984 Cttnbp2B9EJA2 1648 aa22.39■■□□□ 1.18
Smarcc1-204ENSMUST00000197984 Il27Q8K3I6 234 aa22.32■■□□□ 1.16
Smarcc1-204ENSMUST00000197984 Anp32aO35381 247 aa22.29■■□□□ 1.16
Smarcc1-204ENSMUST00000197984 Cc2d2aQ8CFW7 1633 aa22.26■■□□□ 1.15
Smarcc1-204ENSMUST00000197984 Top2bQ64511 1612 aa22.23■■□□□ 1.15
Smarcc1-204ENSMUST00000197984 Iqgap2Q3UQ44 1575 aa22.17■■□□□ 1.14
Smarcc1-204ENSMUST00000197984 Fmn1Q05860 1466 aa22.15■■□□□ 1.14
Smarcc1-204ENSMUST00000197984 Nolc1E9Q5C9 702 aaKnown RBP22.12■■□□□ 1.13
Smarcc1-204ENSMUST00000197984 NclP09405 707 aaKnown RBP22.11■■□□□ 1.13
Smarcc1-204ENSMUST00000197984 Eif5bQ05D44 1216 aaKnown RBP22.1■■□□□ 1.13
Smarcc1-204ENSMUST00000197984 Pelp1Q9DBD5 1123 aaKnown RBP22.09■■□□□ 1.13
Smarcc1-204ENSMUST00000197984 Atad2bE9Q166 1460 aaKnown RBP22.08■■□□□ 1.13
Smarcc1-204ENSMUST00000197984 Calr4Q3TQS0 420 aa22.07■■□□□ 1.12
Smarcc1-204ENSMUST00000197984 Pds5bQ4VA53 1446 aaKnown RBP22.02■■□□□ 1.12
Smarcc1-204ENSMUST00000197984 Stra8P70278 393 aa22■■□□□ 1.11
Smarcc1-204ENSMUST00000197984 Rapgef2Q8CHG7 1496 aa22■■□□□ 1.11
Smarcc1-204ENSMUST00000197984 Clip1Q922J3 1391 aa21.99■■□□□ 1.11
Smarcc1-204ENSMUST00000197984 Cep162Q6ZQ06 1403 aa21.98■■□□□ 1.11
Smarcc1-204ENSMUST00000197984 Ppp4r2Q0VGB7 417 aa21.97■■□□□ 1.11
Smarcc1-204ENSMUST00000197984 Top2aQ01320 1528 aaKnown RBP21.93■■□□□ 1.1
Smarcc1-204ENSMUST00000197984 Fam50aQ9WV03 339 aaKnown RBP21.92■■□□□ 1.1
Smarcc1-204ENSMUST00000197984 Amer1Q7TS75 1132 aa21.91■■□□□ 1.1
Smarcc1-204ENSMUST00000197984 Znf710Q3U288 666 aa21.9■■□□□ 1.1
Smarcc1-204ENSMUST00000197984 Kif15Q6P9L6 1387 aa21.89■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 77.4 ms