RNA–Protein interactions for RNA: ENSMUST00000193675.1

Vim-206, Transcript of Vimentin, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vim, Length 1,777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vim-206ENSMUST00000193675 Col17a1Q07563 1470 aa30.52■■■□□ 2.48
Vim-206ENSMUST00000193675 Rapgef2Q8CHG7 1496 aa30.51■■■□□ 2.47
Vim-206ENSMUST00000193675 Arhgap35Q91YM2 1499 aa30.41■■■□□ 2.46
Vim-206ENSMUST00000193675 Acin1Q9JIX8 1338 aaKnown RBP30.41■■■□□ 2.46
Vim-206ENSMUST00000193675 Carmil1Q6EDY6 1374 aa30.4■■■□□ 2.46
Vim-206ENSMUST00000193675 EprsQ8CGC7 1512 aaKnown RBP30.39■■■□□ 2.46
Vim-206ENSMUST00000193675 Map3k1P53349 1493 aa30.37■■■□□ 2.45
Vim-206ENSMUST00000193675 AknaQ80VW7 1404 aa30.35■■■□□ 2.45
Vim-206ENSMUST00000193675 Arhgap27A2AB59 869 aa30.35■■■□□ 2.45
Vim-206ENSMUST00000193675 TchhA0A0B4J1F9 1599 aa30.32■■■□□ 2.45
Vim-206ENSMUST00000193675 WizO88286 1684 aaKnown RBP30.32■■■□□ 2.44
Vim-206ENSMUST00000193675 Cep162Q6ZQ06 1403 aa30.32■■■□□ 2.44
Vim-206ENSMUST00000193675 Adamts12Q811B3 1600 aa30.31■■■□□ 2.44
Vim-206ENSMUST00000193675 Zcchc11B2RX14 1644 aaKnown RBP30.3■■■□□ 2.44
Vim-206ENSMUST00000193675 Abca16E9PWJ7 1678 aa30.29■■■□□ 2.44
Vim-206ENSMUST00000193675 CadpsQ80TJ1 1355 aa30.28■■■□□ 2.44
Vim-206ENSMUST00000193675 PxdnQ3UQ28 1475 aa30.27■■■□□ 2.44
Vim-206ENSMUST00000193675 Abcc1O35379 1528 aa30.24■■■□□ 2.43
Vim-206ENSMUST00000193675 Abcc2Q8VI47 1543 aa30.24■■■□□ 2.43
Vim-206ENSMUST00000193675 Eif4g1Q6NZJ6 1600 aaKnown RBP30.24■■■□□ 2.43
Vim-206ENSMUST00000193675 Clip1Q922J3 1391 aa30.23■■■□□ 2.43
Vim-206ENSMUST00000193675 Dnmt1P13864 1620 aaKnown RBP30.23■■■□□ 2.43
Vim-206ENSMUST00000193675 Myt1lP97500 1187 aa30.2■■■□□ 2.42
Vim-206ENSMUST00000193675 Gapvd1Q6PAR5 1458 aa30.19■■■□□ 2.42
Vim-206ENSMUST00000193675 Polr1aO35134 1717 aaKnown RBP30.18■■■□□ 2.42
Vim-206ENSMUST00000193675 Rpap1Q80TE0 1409 aa30.17■■■□□ 2.42
Vim-206ENSMUST00000193675 Map3k4O08648 1597 aa30.16■■■□□ 2.42
Vim-206ENSMUST00000193675 Gm7298A0A0N4SVU1 1476 aa30.15■■■□□ 2.42
Vim-206ENSMUST00000193675 Neo1P97798 1493 aa30.13■■■□□ 2.41
Vim-206ENSMUST00000193675 Soga1E1U8D0 1418 aa30.13■■■□□ 2.41
Vim-206ENSMUST00000193675 Cep170Q6A065 1588 aa30.12■■■□□ 2.41
Vim-206ENSMUST00000193675 Ythdc2B2RR83 1445 aaKnown RBP30.09■■■□□ 2.41
Vim-206ENSMUST00000193675 Gm156Q58A37 223 aa30.09■■■□□ 2.41
Vim-206ENSMUST00000193675 Adgrl3Q80TS3 1537 aa30.09■■■□□ 2.41
Vim-206ENSMUST00000193675 Chd1P40201 1711 aa30.08■■■□□ 2.41
Vim-206ENSMUST00000193675 BC005561E9Q5E2 1589 aa30.06■■■□□ 2.4
Vim-206ENSMUST00000193675 Gm14025A2AP89 1413 aa30.05■■■□□ 2.4
Vim-206ENSMUST00000193675 Slx4Q6P1D7 1565 aa30.03■■■□□ 2.4
Vim-206ENSMUST00000193675 Cux1P53564 1515 aa30.01■■■□□ 2.39
Vim-206ENSMUST00000193675 Jph4Q80WT0 628 aa29.99■■■□□ 2.39
Vim-206ENSMUST00000193675 Ehmt2Q9Z148 1263 aaKnown RBP29.98■■■□□ 2.39
Vim-206ENSMUST00000193675 Abca5Q8K448 1642 aa29.98■■■□□ 2.39
Vim-206ENSMUST00000193675 Fyco1Q8VDC1 1437 aa29.98■■■□□ 2.39
Vim-206ENSMUST00000193675 PtprtQ99M80 1454 aa29.95■■■□□ 2.39
Vim-206ENSMUST00000193675 WrnO09053 1401 aa29.92■■■□□ 2.38
Vim-206ENSMUST00000193675 Arhgef12Q8R4H2 1543 aaKnown RBP29.86■■■□□ 2.37
Vim-206ENSMUST00000193675 Ttbk1Q6PCN3 1308 aa29.85■■■□□ 2.37
Vim-206ENSMUST00000193675 Arhgef5E9Q7D5 1581 aa29.81■■■□□ 2.36
Vim-206ENSMUST00000193675 Ankrd26Q811D2 1581 aa29.78■■■□□ 2.36
Vim-206ENSMUST00000193675 Fkbp15Q6P9Q6 1216 aaKnown RBP29.77■■■□□ 2.36
Vim-206ENSMUST00000193675 AI481877A2ALV5 1481 aa29.75■■■□□ 2.35
Vim-206ENSMUST00000193675 Setd5Q5XJV7 1441 aa29.72■■■□□ 2.35
Vim-206ENSMUST00000193675 Rrbp1Q99PL5 1605 aaKnown RBP29.71■■■□□ 2.35
Vim-206ENSMUST00000193675 Aebp1Q640N1 1128 aa29.71■■■□□ 2.35
Vim-206ENSMUST00000193675 Ifnlr1Q8CGK5 535 aa29.66■■■□□ 2.34
Vim-206ENSMUST00000193675 Eea1Q8BL66 1411 aa29.65■■■□□ 2.34
Vim-206ENSMUST00000193675 Igf1rQ60751 1373 aa29.65■■■□□ 2.34
Vim-206ENSMUST00000193675 Setbp1Q9Z180 1582 aa29.65■■■□□ 2.34
Vim-206ENSMUST00000193675 Pprc1Q6NZN1 1644 aa29.64■■■□□ 2.34
Vim-206ENSMUST00000193675 Arhgap31A6X8Z5 1425 aa29.63■■■□□ 2.33
Vim-206ENSMUST00000193675 Kdm5bQ80Y84 1544 aa29.6■■■□□ 2.33
Vim-206ENSMUST00000193675 Erich3F6QRE9 1637 aa29.58■■■□□ 2.33
Vim-206ENSMUST00000193675 Ap3b1Q9Z1T1 1105 aa29.55■■■□□ 2.32
Vim-206ENSMUST00000193675 Ccdc141E9Q8Q6 1531 aa29.55■■■□□ 2.32
Vim-206ENSMUST00000193675 Kif27Q7M6Z4 1394 aa29.55■■■□□ 2.32
Vim-206ENSMUST00000193675 Ak9G3UYQ4 1894 aa29.54■■■□□ 2.32
Vim-206ENSMUST00000193675 BlmO88700 1416 aa29.51■■■□□ 2.32
Vim-206ENSMUST00000193675 Ppp1r18Q8BQ30 594 aa29.51■■■□□ 2.31
Vim-206ENSMUST00000193675 Lmo7E9PYF4 1699 aaKnown RBP29.5■■■□□ 2.31
Vim-206ENSMUST00000193675 Pcdh10E9PXQ7 1057 aa29.47■■■□□ 2.31
Vim-206ENSMUST00000193675 Rapgef6Q5NCJ1 1609 aa29.46■■■□□ 2.31
Vim-206ENSMUST00000193675 Ncoa2Q61026 1462 aa29.46■■■□□ 2.31
Vim-206ENSMUST00000193675 Arid3cA6PWV5 409 aa29.45■■■□□ 2.31
Vim-206ENSMUST00000193675 Pcf11G3X9Z4 1553 aa29.43■■■□□ 2.3
Vim-206ENSMUST00000193675 Lrrc9Q8CDN9 1456 aa29.42■■■□□ 2.3
Vim-206ENSMUST00000193675 NhsB1AV60 1647 aa29.39■■■□□ 2.3
Vim-206ENSMUST00000193675 Arap1Q4LDD4 1452 aa29.38■■■□□ 2.29
Vim-206ENSMUST00000193675 Wdr7Q920I9 1489 aa29.38■■■□□ 2.29
Vim-206ENSMUST00000193675 CntlnA2AM05 1397 aa29.37■■■□□ 2.29
Vim-206ENSMUST00000193675 Mroh2aD3Z750 1679 aa29.36■■■□□ 2.29
Vim-206ENSMUST00000193675 Znf608Q56A10 1511 aa29.35■■■□□ 2.29
Vim-206ENSMUST00000193675 Cul7Q8VE73 1689 aa29.35■■■□□ 2.29
Vim-206ENSMUST00000193675 Clasp1Q80TV8 1535 aaKnown RBP29.33■■■□□ 2.29
Vim-206ENSMUST00000193675 Atp10dQ8K2X1 1416 aa29.33■■■□□ 2.29
Vim-206ENSMUST00000193675 Magi1Q6RHR9 1471 aa29.32■■■□□ 2.28
Vim-206ENSMUST00000193675 Fancd2Q80V62 1450 aa29.31■■■□□ 2.28
Vim-206ENSMUST00000193675 Gcc2Q8CHG3 1679 aa29.31■■■□□ 2.28
Vim-206ENSMUST00000193675 Arhgef11Q68FM7 1552 aa29.28■■■□□ 2.28
Vim-206ENSMUST00000193675 Fam163aQ8CAA5 168 aa29.27■■■□□ 2.28
Vim-206ENSMUST00000193675 Kiaa1210E9Q0C6 1637 aa29.25■■■□□ 2.27
Vim-206ENSMUST00000193675 Ncoa3O09000 1398 aa29.24■■■□□ 2.27
Vim-206ENSMUST00000193675 Dhx57Q6P5D3 1388 aaKnown RBP29.21■■■□□ 2.27
Vim-206ENSMUST00000193675 Mug1P28665 1476 aa29.21■■■□□ 2.27
Vim-206ENSMUST00000193675 Ttc37F8VPK0 1563 aa29.2■■■□□ 2.26
Vim-206ENSMUST00000193675 Lmod2Q3UHZ5 550 aa29.19■■■□□ 2.26
Vim-206ENSMUST00000193675 Prex2Q3LAC4 1598 aa29.15■■■□□ 2.26
Vim-206ENSMUST00000193675 Abca8bQ8K440 1620 aa29.15■■■□□ 2.26
Vim-206ENSMUST00000193675 Naip1Q9QWK5 1403 aa29.15■■■□□ 2.26
Vim-206ENSMUST00000193675 Depdc5P61460 1591 aa29.14■■■□□ 2.26
Vim-206ENSMUST00000193675 Gm1043A0A140LJC2 1431 aa29.13■■■□□ 2.25
Retrieved 100 of 22,080 RNA–protein pairs in 60 ms