RNA–Protein interactions for RNA: ENSMUST00000193675.1

Vim-206, Transcript of Vimentin, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vim, Length 1,777 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vim-206ENSMUST00000193675 Gm35339A0A140LHH9 1649 aa41.44■■■■■ 4.22
Vim-206ENSMUST00000193675 NischQ80TM9 1593 aa41.08■■■■■ 4.17
Vim-206ENSMUST00000193675 Abcc9P70170 1546 aa39.73■■■■□ 3.95
Vim-206ENSMUST00000193675 Abcc8B2RUS7 1588 aa39.63■■■■□ 3.93
Vim-206ENSMUST00000193675 ScribQ80U72 1612 aa38.01■■■■□ 3.68
Vim-206ENSMUST00000193675 NacadQ5SWP3 1504 aa36.94■■■■□ 3.5
Vim-206ENSMUST00000193675 Kdm5dQ62240 1548 aa36.84■■■■□ 3.49
Vim-206ENSMUST00000193675 Dcaf1Q80TR8 1506 aa36.56■■■■□ 3.44
Vim-206ENSMUST00000193675 Sycp2Q9CUU3 1500 aa36.18■■■■□ 3.38
Vim-206ENSMUST00000193675 Rhox8Q6VSS7 320 aa35.87■■■■□ 3.33
Vim-206ENSMUST00000193675 Rb1cc1Q9ESK9 1588 aa35.8■■■■□ 3.32
Vim-206ENSMUST00000193675 BicraF8VPZ9 1578 aa35.61■■■■□ 3.29
Vim-206ENSMUST00000193675 Ccdc180J3QNE4 1664 aa35.33■■■■□ 3.25
Vim-206ENSMUST00000193675 Baz1aO88379 1555 aa35.32■■■■□ 3.24
Vim-206ENSMUST00000193675 Crybg2B7ZCC2 1516 aa35.22■■■■□ 3.23
Vim-206ENSMUST00000193675 Zcchc6Q5BLK4 1491 aaKnown RBP34.8■■■■□ 3.16
Vim-206ENSMUST00000193675 Pds5bQ4VA53 1446 aaKnown RBP34.65■■■■□ 3.14
Vim-206ENSMUST00000193675 Atad2bE9Q166 1460 aaKnown RBP34.36■■■■□ 3.09
Vim-206ENSMUST00000193675 Dnajc5bQ9CQ94 199 aa34.35■■■■□ 3.09
Vim-206ENSMUST00000193675 Smarca2Q6DIC0 1577 aa34.29■■■■□ 3.08
Vim-206ENSMUST00000193675 Rtl1Q7M732 1744 aa34.17■■■■□ 3.06
Vim-206ENSMUST00000193675 Thoc2B1AZI6 1594 aaKnown RBP34.16■■■■□ 3.06
Vim-206ENSMUST00000193675 Smarca4Q3TKT4 1613 aaKnown RBP34.13■■■■□ 3.05
Vim-206ENSMUST00000193675 Cecr2E9Q2Z1 1453 aa34.13■■■■□ 3.05
Vim-206ENSMUST00000193675 Iqgap2Q3UQ44 1575 aa33.91■■■■□ 3.02
Vim-206ENSMUST00000193675 Ercc6F8VPZ5 1481 aa33.89■■■■□ 3.02
Vim-206ENSMUST00000193675 Cc2d2aQ8CFW7 1633 aa33.67■■■□□ 2.98
Vim-206ENSMUST00000193675 Wdr62Q3U3T8 1523 aa33.57■■■□□ 2.96
Vim-206ENSMUST00000193675 Frmpd1A2AKB4 1549 aa33.55■■■□□ 2.96
Vim-206ENSMUST00000193675 Ccdc136Q3TVA9 1136 aa33.53■■■□□ 2.96
Vim-206ENSMUST00000193675 Fam135aQ6NS59 1506 aa33.46■■■□□ 2.95
Vim-206ENSMUST00000193675 Brd4Q9ESU6 1400 aaKnown RBP33.43■■■□□ 2.94
Vim-206ENSMUST00000193675 CftrP26361 1476 aa33.41■■■□□ 2.94
Vim-206ENSMUST00000193675 Phldb1Q6PDH0 1371 aaKnown RBP33.38■■■□□ 2.93
Vim-206ENSMUST00000193675 Synj1Q8CHC4 1574 aa33.33■■■□□ 2.93
Vim-206ENSMUST00000193675 Cttnbp2B9EJA2 1648 aa33.33■■■□□ 2.93
Vim-206ENSMUST00000193675 Baz1bQ9Z277 1479 aa33.13■■■□□ 2.89
Vim-206ENSMUST00000193675 Ubl4bQ9CQ84 188 aa33.12■■■□□ 2.89
Vim-206ENSMUST00000193675 Trim41Q5NCC3 630 aa33.07■■■□□ 2.88
Vim-206ENSMUST00000193675 Unc13aQ4KUS2 1712 aa33.03■■■□□ 2.88
Vim-206ENSMUST00000193675 Esf1Q3V1V3 845 aaKnown RBP32.96■■■□□ 2.87
Vim-206ENSMUST00000193675 Mrc2Q64449 1479 aa32.72■■■□□ 2.83
Vim-206ENSMUST00000193675 Rsf1E9PWW9 1441 aaKnown RBP32.57■■■□□ 2.8
Vim-206ENSMUST00000193675 Kif15Q6P9L6 1387 aa32.48■■■□□ 2.79
Vim-206ENSMUST00000193675 Cux2P70298 1426 aa32.4■■■□□ 2.78
Vim-206ENSMUST00000193675 Lamc3Q9R0B6 1581 aa32.36■■■□□ 2.77
Vim-206ENSMUST00000193675 Golga3P55937 1487 aa32.32■■■□□ 2.76
Vim-206ENSMUST00000193675 Cngb1E1AZ71 1325 aa32.26■■■□□ 2.75
Vim-206ENSMUST00000193675 Top2bQ64511 1612 aa32.2■■■□□ 2.74
Vim-206ENSMUST00000193675 Npm1Q61937 292 aaKnown RBP32.17■■■□□ 2.74
Vim-206ENSMUST00000193675 TnnQ80Z71 1560 aa32.03■■■□□ 2.72
Vim-206ENSMUST00000193675 Kif21aQ9QXL2 1672 aa32.01■■■□□ 2.71
Vim-206ENSMUST00000193675 Cep164Q5DU05 1446 aa32.01■■■□□ 2.71
Vim-206ENSMUST00000193675 Lrriq1Q0P5X1 1673 aa31.95■■■□□ 2.7
Vim-206ENSMUST00000193675 Ccdc18Q640L5 1455 aa31.94■■■□□ 2.7
Vim-206ENSMUST00000193675 Il27Q8K3I6 234 aa31.91■■■□□ 2.7
Vim-206ENSMUST00000193675 Fmn1Q05860 1466 aa31.9■■■□□ 2.7
Vim-206ENSMUST00000193675 Camsap1A2AHC3 1581 aa31.79■■■□□ 2.68
Vim-206ENSMUST00000193675 LrpprcQ6PB66 1392 aaKnown RBP31.74■■■□□ 2.67
Vim-206ENSMUST00000193675 Dhx29Q6PGC1 1365 aaKnown RBP31.74■■■□□ 2.67
Vim-206ENSMUST00000193675 HrcG5E8J6 738 aa31.67■■■□□ 2.66
Vim-206ENSMUST00000193675 Urb2E9Q7L1 1524 aaKnown RBP31.57■■■□□ 2.64
Vim-206ENSMUST00000193675 Plb1Q3TTY0 1478 aa31.57■■■□□ 2.64
Vim-206ENSMUST00000193675 PogzQ8BZH4 1409 aaKnown RBP31.54■■■□□ 2.64
Vim-206ENSMUST00000193675 Crocc2F6XLV1 1638 aa31.54■■■□□ 2.64
Vim-206ENSMUST00000193675 Ccdc88bQ4QRL3 1481 aa31.51■■■□□ 2.63
Vim-206ENSMUST00000193675 Eif4g3Q80XI3 1579 aaKnown RBP31.49■■■□□ 2.63
Vim-206ENSMUST00000193675 Grin2bQ01097 1482 aa31.42■■■□□ 2.62
Vim-206ENSMUST00000193675 Duox2A2AQ99 1517 aa31.41■■■□□ 2.62
Vim-206ENSMUST00000193675 Chic1Q8CBW7 227 aa31.38■■■□□ 2.61
Vim-206ENSMUST00000193675 Ift140E9PY46 1464 aa31.31■■■□□ 2.6
Vim-206ENSMUST00000193675 Top2aQ01320 1528 aaKnown RBP31.29■■■□□ 2.6
Vim-206ENSMUST00000193675 Efcab5A0JP43 1406 aa31.26■■■□□ 2.59
Vim-206ENSMUST00000193675 NrkQ9R0G8 1455 aa31.16■■■□□ 2.58
Vim-206ENSMUST00000193675 Disp1Q3TDN0 1521 aa31.13■■■□□ 2.57
Vim-206ENSMUST00000193675 Samd9lQ69Z37 1561 aa31.09■■■□□ 2.57
Vim-206ENSMUST00000193675 Rusc2Q80U22 1514 aa31.08■■■□□ 2.57
Vim-206ENSMUST00000193675 Shroom4Q1W617 1475 aa31■■■□□ 2.55
Vim-206ENSMUST00000193675 Shroom2A2ALU4 1481 aa31■■■□□ 2.55
Vim-206ENSMUST00000193675 PtprkP35822 1457 aa30.98■■■□□ 2.55
Vim-206ENSMUST00000193675 Nup160Q9Z0W3 1402 aaKnown RBP30.97■■■□□ 2.55
Vim-206ENSMUST00000193675 Pbrm1Q8BSQ9 1634 aaKnown RBP30.96■■■□□ 2.55
Vim-206ENSMUST00000193675 Rad54l2Q99NG0 1466 aa30.95■■■□□ 2.54
Vim-206ENSMUST00000193675 Cc2d2bA0A286YDU8 1405 aa30.94■■■□□ 2.54
Vim-206ENSMUST00000193675 Setd1bQ8CFT2 1985 aa30.9■■■□□ 2.54
Vim-206ENSMUST00000193675 Dnajc5P60904 198 aa30.88■■■□□ 2.53
Vim-206ENSMUST00000193675 Pabpn1Q8CCS6 302 aaKnown RBP30.85■■■□□ 2.53
Vim-206ENSMUST00000193675 Grin2aP35436 1464 aa30.83■■■□□ 2.53
Vim-206ENSMUST00000193675 Magi3Q9EQJ9 1476 aa30.82■■■□□ 2.52
Vim-206ENSMUST00000193675 Rpgrip1Q9EPQ2 1331 aa30.82■■■□□ 2.52
Vim-206ENSMUST00000193675 Zeb1Q64318 1117 aa30.79■■■□□ 2.52
Vim-206ENSMUST00000193675 Npm2Q80W85 207 aa30.77■■■□□ 2.52
Vim-206ENSMUST00000193675 SynmQ70IV5 1561 aa30.75■■■□□ 2.51
Vim-206ENSMUST00000193675 AqrQ8CFQ3 1481 aaKnown RBP30.7■■■□□ 2.51
Vim-206ENSMUST00000193675 Pelp1Q9DBD5 1123 aaKnown RBP30.68■■■□□ 2.5
Vim-206ENSMUST00000193675 Pla2r1Q62028 1487 aa30.67■■■□□ 2.5
Vim-206ENSMUST00000193675 Gab3Q8BSM5 595 aa30.66■■■□□ 2.5
Vim-206ENSMUST00000193675 Mroh2bQ7M6Y6 1581 aa30.62■■■□□ 2.49
Vim-206ENSMUST00000193675 Fgd6Q69ZL1 1399 aa30.59■■■□□ 2.49
Vim-206ENSMUST00000193675 Gpatch8A2A6A1 1505 aa30.57■■■□□ 2.48
Retrieved 100 of 22,080 RNA–protein pairs in 123.5 ms