RNA–Protein interactions for RNA: ENSMUST00000187938.6

Fn1-211, Transcript of Fibronectin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Fn1, Length 7,965 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-211ENSMUST00000187938 Eif4g2Q62448 906 aaKnown RBP16.84■□□□□ 0.29
Fn1-211ENSMUST00000187938 Rtl5Q5DTT4 599 aa16.84■□□□□ 0.29
Fn1-211ENSMUST00000187938 Grwd1Q810D6 446 aaKnown RBP16.81■□□□□ 0.28
Fn1-211ENSMUST00000187938 Ecm2Q5FW85 670 aa16.79■□□□□ 0.28
Fn1-211ENSMUST00000187938 Exosc9Q9JHI7 438 aaKnown RBP16.79■□□□□ 0.28
Fn1-211ENSMUST00000187938 Prm3Q62100 101 aa16.78■□□□□ 0.28
Fn1-211ENSMUST00000187938 Chic2Q9D9G3 165 aa16.77■□□□□ 0.27
Fn1-211ENSMUST00000187938 Noc3lQ8VI84 807 aaKnown RBP16.75■□□□□ 0.27
Fn1-211ENSMUST00000187938 Pes1Q9EQ61 584 aaKnown RBP16.74■□□□□ 0.27
Fn1-211ENSMUST00000187938 Rtl1Q7M732 1744 aa16.73■□□□□ 0.27
Fn1-211ENSMUST00000187938 Gm6268A2A3U9 297 aa16.73■□□□□ 0.27
Fn1-211ENSMUST00000187938 Myt1Q8CFC2 1127 aa16.7■□□□□ 0.26
Fn1-211ENSMUST00000187938 Mier1Q5UAK0 511 aa16.68■□□□□ 0.26
Fn1-211ENSMUST00000187938 Kdm2aP59997 1161 aa16.68■□□□□ 0.26
Fn1-211ENSMUST00000187938 Srpk2O54781 681 aaKnown RBP16.67■□□□□ 0.26
Fn1-211ENSMUST00000187938 Eid3Q3V124 375 aa16.66■□□□□ 0.26
Fn1-211ENSMUST00000187938 Isy1Q69ZQ2 285 aaKnown RBP16.64■□□□□ 0.25
Fn1-211ENSMUST00000187938 Arid4bA2CG63 1314 aaKnown RBP16.62■□□□□ 0.25
Fn1-211ENSMUST00000187938 HdgfP51859 237 aaKnown RBP16.61■□□□□ 0.25
Fn1-211ENSMUST00000187938 1700019A02RikA0A087WPV9 146 aa16.6■□□□□ 0.25
Fn1-211ENSMUST00000187938 Ciz1Q8VEH2 845 aa16.6■□□□□ 0.25
Fn1-211ENSMUST00000187938 Chrna2Q91X60 512 aa16.6■□□□□ 0.25
Fn1-211ENSMUST00000187938 Sh3bp5Q9Z131 463 aa16.6■□□□□ 0.25
Fn1-211ENSMUST00000187938 PtmaP26350 111 aa16.6■□□□□ 0.25
Fn1-211ENSMUST00000187938 Iqcf3Q9D498 203 aa16.58■□□□□ 0.25
Fn1-211ENSMUST00000187938 Arhgap27A2AB59 869 aa16.57■□□□□ 0.24
Fn1-211ENSMUST00000187938 Anp32aO35381 247 aa16.57■□□□□ 0.24
Fn1-211ENSMUST00000187938 Stag3O70576 1240 aa16.56■□□□□ 0.24
Fn1-211ENSMUST00000187938 Gm20521D3Z5F7 333 aa16.56■□□□□ 0.24
Fn1-211ENSMUST00000187938 Stk24Q99KH8 431 aa16.56■□□□□ 0.24
Fn1-211ENSMUST00000187938 Dnai2A2AC93 623 aa16.55■□□□□ 0.24
Fn1-211ENSMUST00000187938 Nol10Q5RJG1 687 aaKnown RBP16.55■□□□□ 0.24
Fn1-211ENSMUST00000187938 Mapk8ip3Q9ESN9 1337 aa16.54■□□□□ 0.24
Fn1-211ENSMUST00000187938 Zfp777B9EKF4 885 aa16.54■□□□□ 0.24
Fn1-211ENSMUST00000187938 Clip1Q922J3 1391 aa16.53■□□□□ 0.24
Fn1-211ENSMUST00000187938 Anapc15P60007 132 aa16.52■□□□□ 0.23
Fn1-211ENSMUST00000187938 Mroh3A0A1D5RM54 893 aa16.49■□□□□ 0.23
Fn1-211ENSMUST00000187938 Ccer2J3QPU5 274 aa16.49■□□□□ 0.23
Fn1-211ENSMUST00000187938 Bcl11bQ99PV8 884 aa16.49■□□□□ 0.23
Fn1-211ENSMUST00000187938 Rgl3Q3UYI5 709 aa16.48■□□□□ 0.23
Fn1-211ENSMUST00000187938 Vps53Q8CCB4 832 aa16.48■□□□□ 0.23
Fn1-211ENSMUST00000187938 Rassf8Q8CJ96 419 aa16.44■□□□□ 0.22
Fn1-211ENSMUST00000187938 Trim44Q9QXA7 346 aa16.43■□□□□ 0.22
Fn1-211ENSMUST00000187938 Fbln2P37889 1221 aa16.41■□□□□ 0.22
Fn1-211ENSMUST00000187938 Tomm22Q9CPQ3 142 aa16.41■□□□□ 0.22
Fn1-211ENSMUST00000187938 Psme1P97371 249 aa16.41■□□□□ 0.22
Fn1-211ENSMUST00000187938 Sox12Q04890 314 aa16.41■□□□□ 0.22
Fn1-211ENSMUST00000187938 ClspnQ80YR7 1315 aa16.4■□□□□ 0.22
Fn1-211ENSMUST00000187938 Rrp7aQ9D1C9 280 aaKnown RBP16.4■□□□□ 0.22
Fn1-211ENSMUST00000187938 Rtf1A2AQ19 715 aaKnown RBP16.39■□□□□ 0.21
Fn1-211ENSMUST00000187938 Paf1Q8K2T8 535 aa16.39■□□□□ 0.21
Fn1-211ENSMUST00000187938 Hsp90ab1P11499 724 aaKnown RBP16.37■□□□□ 0.21
Fn1-211ENSMUST00000187938 Hsp90b1P08113 802 aaKnown RBP16.36■□□□□ 0.21
Fn1-211ENSMUST00000187938 Pcgf6Q99NA9 353 aa16.36■□□□□ 0.21
Fn1-211ENSMUST00000187938 BlmO88700 1416 aa16.36■□□□□ 0.21
Fn1-211ENSMUST00000187938 Hs1bp3Q3TC93 395 aa16.34■□□□□ 0.21
Fn1-211ENSMUST00000187938 Trim30dE9PWL0 497 aa16.33■□□□□ 0.21
Fn1-211ENSMUST00000187938 Plin1Q8CGN5 517 aa16.33■□□□□ 0.21
Fn1-211ENSMUST00000187938 Cnga1P29974 684 aa16.32■□□□□ 0.2
Fn1-211ENSMUST00000187938 Pak3Q61036 559 aa16.31■□□□□ 0.2
Fn1-211ENSMUST00000187938 Txndc2Q6P902 515 aa16.31■□□□□ 0.2
Fn1-211ENSMUST00000187938 Neurod2Q62414 383 aa16.31■□□□□ 0.2
Fn1-211ENSMUST00000187938 Supt5hO55201 1082 aaKnown RBP16.3■□□□□ 0.2
Fn1-211ENSMUST00000187938 Ppp4r2Q0VGB7 417 aa16.29■□□□□ 0.2
Fn1-211ENSMUST00000187938 Kcnn1Q9EQR3 537 aa16.29■□□□□ 0.2
Fn1-211ENSMUST00000187938 Chmp4bQ9D8B3 224 aaKnown RBP16.28■□□□□ 0.2
Fn1-211ENSMUST00000187938 Znf316Q6PGE4 1016 aa16.28■□□□□ 0.2
Fn1-211ENSMUST00000187938 Arid3cA6PWV5 409 aa16.28■□□□□ 0.2
Fn1-211ENSMUST00000187938 Tnnt1O88346 262 aa16.28■□□□□ 0.2
Fn1-211ENSMUST00000187938 Apbb1Q9QXJ1 710 aa16.28■□□□□ 0.2
Fn1-211ENSMUST00000187938 Mrs2Q5NCE8 434 aa16.27■□□□□ 0.2
Fn1-211ENSMUST00000187938 NudcO35685 332 aaKnown RBP16.27■□□□□ 0.2
Fn1-211ENSMUST00000187938 Ccar1Q8CH18 1146 aaKnown RBP16.27■□□□□ 0.19
Fn1-211ENSMUST00000187938 Stk26Q99JT2 416 aa16.26■□□□□ 0.19
Fn1-211ENSMUST00000187938 Sf3b2Q3UJB0 878 aaKnown RBP16.25■□□□□ 0.19
Fn1-211ENSMUST00000187938 Brd4Q9ESU6 1400 aaKnown RBP16.24■□□□□ 0.19
Fn1-211ENSMUST00000187938 Chmp3Q9CQ10 224 aa16.24■□□□□ 0.19
Fn1-211ENSMUST00000187938 Casc1Q6TDU8 730 aa16.24■□□□□ 0.19
Fn1-211ENSMUST00000187938 Plcb2A3KGF7 1181 aa16.23■□□□□ 0.19
Fn1-211ENSMUST00000187938 Ercc6F8VPZ5 1481 aa16.23■□□□□ 0.19
Fn1-211ENSMUST00000187938 U2surpQ6NV83 1029 aaKnown RBP16.22■□□□□ 0.19
Fn1-211ENSMUST00000187938 Mak16Q8BGS0 296 aaKnown RBP16.22■□□□□ 0.19
Fn1-211ENSMUST00000187938 Tpm3-rs7D3Z2H9 248 aa16.2■□□□□ 0.18
Fn1-211ENSMUST00000187938 MccE9PWI3 1003 aa16.2■□□□□ 0.18
Fn1-211ENSMUST00000187938 Wwc2Q6NXJ0 1187 aa16.2■□□□□ 0.18
Fn1-211ENSMUST00000187938 Q3TQI7 289 aaKnown RBP16.16■□□□□ 0.18
Fn1-211ENSMUST00000187938 Kri1Q8VDQ9 704 aaKnown RBP16.16■□□□□ 0.18
Fn1-211ENSMUST00000187938 Armcx1Q9CX83 456 aa16.16■□□□□ 0.18
Fn1-211ENSMUST00000187938 Pip4k2bQ80XI4 416 aa16.15■□□□□ 0.18
Fn1-211ENSMUST00000187938 Calr4Q3TQS0 420 aa16.15■□□□□ 0.18
Fn1-211ENSMUST00000187938 Card11Q8CIS0 1159 aa16.14■□□□□ 0.17
Fn1-211ENSMUST00000187938 Ripply1Q2WG77 201 aa16.13■□□□□ 0.17
Fn1-211ENSMUST00000187938 Map7O88735 730 aa16.13■□□□□ 0.17
Fn1-211ENSMUST00000187938 AknaQ80VW7 1404 aa16.13■□□□□ 0.17
Fn1-211ENSMUST00000187938 Sart3Q9JLI8 962 aaKnown RBP16.12■□□□□ 0.17
Fn1-211ENSMUST00000187938 Iffo2Q8R2V2 512 aa16.11■□□□□ 0.17
Fn1-211ENSMUST00000187938 MecomP14404 1042 aa16.11■□□□□ 0.17
Fn1-211ENSMUST00000187938 Kif15Q6P9L6 1387 aa16.1■□□□□ 0.17
Fn1-211ENSMUST00000187938 Egfem1Q8C088 590 aa16.1■□□□□ 0.17
Fn1-211ENSMUST00000187938 Odf2A3KGV1 830 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 70.9 ms