RNA–Protein interactions for RNA: ENSMUST00000171416.1

R3hdm4-202, Transcript of R3H domain-containing protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene R3hdm4, Length 1,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4-202ENSMUST00000171416 Carmil1Q6EDY6 1374 aa25.15■■□□□ 1.62
R3hdm4-202ENSMUST00000171416 Pabpn1Q8CCS6 302 aaKnown RBP25.13■■□□□ 1.61
R3hdm4-202ENSMUST00000171416 Fgd6Q69ZL1 1399 aa25.11■■□□□ 1.61
R3hdm4-202ENSMUST00000171416 EprsQ8CGC7 1512 aaKnown RBP25.1■■□□□ 1.61
R3hdm4-202ENSMUST00000171416 Adamts12Q811B3 1600 aa25.09■■□□□ 1.61
R3hdm4-202ENSMUST00000171416 TchhA0A0B4J1F9 1599 aa25.08■■□□□ 1.6
R3hdm4-202ENSMUST00000171416 Abca16E9PWJ7 1678 aa25.05■■□□□ 1.6
R3hdm4-202ENSMUST00000171416 WizO88286 1684 aaKnown RBP25.04■■□□□ 1.6
R3hdm4-202ENSMUST00000171416 Polr1aO35134 1717 aaKnown RBP25.02■■□□□ 1.6
R3hdm4-202ENSMUST00000171416 Clip1Q922J3 1391 aa25■■□□□ 1.59
R3hdm4-202ENSMUST00000171416 Pelp1Q9DBD5 1123 aaKnown RBP24.98■■□□□ 1.59
R3hdm4-202ENSMUST00000171416 PxdnQ3UQ28 1475 aa24.98■■□□□ 1.59
R3hdm4-202ENSMUST00000171416 Abcc2Q8VI47 1543 aa24.98■■□□□ 1.59
R3hdm4-202ENSMUST00000171416 Dnmt1P13864 1620 aaKnown RBP24.95■■□□□ 1.58
R3hdm4-202ENSMUST00000171416 Dnajc5P60904 198 aa24.94■■□□□ 1.58
R3hdm4-202ENSMUST00000171416 Map3k4O08648 1597 aa24.93■■□□□ 1.58
R3hdm4-202ENSMUST00000171416 Rpap1Q80TE0 1409 aa24.93■■□□□ 1.58
R3hdm4-202ENSMUST00000171416 CadpsQ80TJ1 1355 aa24.92■■□□□ 1.58
R3hdm4-202ENSMUST00000171416 Col17a1Q07563 1470 aa24.91■■□□□ 1.58
R3hdm4-202ENSMUST00000171416 AknaQ80VW7 1404 aa24.9■■□□□ 1.58
R3hdm4-202ENSMUST00000171416 Gm7298A0A0N4SVU1 1476 aa24.89■■□□□ 1.57
R3hdm4-202ENSMUST00000171416 Myt1lP97500 1187 aa24.89■■□□□ 1.57
R3hdm4-202ENSMUST00000171416 Arhgap27A2AB59 869 aa24.88■■□□□ 1.57
R3hdm4-202ENSMUST00000171416 Abcc1O35379 1528 aa24.87■■□□□ 1.57
R3hdm4-202ENSMUST00000171416 Cux1P53564 1515 aa24.86■■□□□ 1.57
R3hdm4-202ENSMUST00000171416 Zcchc11B2RX14 1644 aaKnown RBP24.86■■□□□ 1.57
R3hdm4-202ENSMUST00000171416 Abca5Q8K448 1642 aa24.86■■□□□ 1.57
R3hdm4-202ENSMUST00000171416 Soga1E1U8D0 1418 aa24.85■■□□□ 1.57
R3hdm4-202ENSMUST00000171416 BC005561E9Q5E2 1589 aa24.83■■□□□ 1.56
R3hdm4-202ENSMUST00000171416 Fyco1Q8VDC1 1437 aa24.82■■□□□ 1.56
R3hdm4-202ENSMUST00000171416 Neo1P97798 1493 aa24.8■■□□□ 1.56
R3hdm4-202ENSMUST00000171416 Slx4Q6P1D7 1565 aa24.8■■□□□ 1.56
R3hdm4-202ENSMUST00000171416 Chd1P40201 1711 aa24.79■■□□□ 1.56
R3hdm4-202ENSMUST00000171416 Gapvd1Q6PAR5 1458 aa24.77■■□□□ 1.56
R3hdm4-202ENSMUST00000171416 Ankrd26Q811D2 1581 aa24.74■■□□□ 1.55
R3hdm4-202ENSMUST00000171416 Cep170Q6A065 1588 aa24.73■■□□□ 1.55
R3hdm4-202ENSMUST00000171416 Gm14025A2AP89 1413 aa24.72■■□□□ 1.55
R3hdm4-202ENSMUST00000171416 Ythdc2B2RR83 1445 aaKnown RBP24.66■■□□□ 1.54
R3hdm4-202ENSMUST00000171416 WrnO09053 1401 aa24.65■■□□□ 1.54
R3hdm4-202ENSMUST00000171416 Erich3F6QRE9 1637 aa24.65■■□□□ 1.54
R3hdm4-202ENSMUST00000171416 Arhgef12Q8R4H2 1543 aaKnown RBP24.64■■□□□ 1.53
R3hdm4-202ENSMUST00000171416 Adgrl3Q80TS3 1537 aa24.63■■□□□ 1.53
R3hdm4-202ENSMUST00000171416 Jph4Q80WT0 628 aa24.61■■□□□ 1.53
R3hdm4-202ENSMUST00000171416 Setd5Q5XJV7 1441 aa24.6■■□□□ 1.53
R3hdm4-202ENSMUST00000171416 Eea1Q8BL66 1411 aa24.6■■□□□ 1.53
R3hdm4-202ENSMUST00000171416 PtprtQ99M80 1454 aa24.59■■□□□ 1.53
R3hdm4-202ENSMUST00000171416 Rrbp1Q99PL5 1605 aaKnown RBP24.57■■□□□ 1.52
R3hdm4-202ENSMUST00000171416 Gm156Q58A37 223 aa24.56■■□□□ 1.52
R3hdm4-202ENSMUST00000171416 Lmo7E9PYF4 1699 aaKnown RBP24.55■■□□□ 1.52
R3hdm4-202ENSMUST00000171416 Aebp1Q640N1 1128 aa24.51■■□□□ 1.51
R3hdm4-202ENSMUST00000171416 Pcf11G3X9Z4 1553 aa24.47■■□□□ 1.51
R3hdm4-202ENSMUST00000171416 BlmO88700 1416 aa24.47■■□□□ 1.51
R3hdm4-202ENSMUST00000171416 AI481877A2ALV5 1481 aa24.46■■□□□ 1.51
R3hdm4-202ENSMUST00000171416 Arhgap31A6X8Z5 1425 aa24.43■■□□□ 1.5
R3hdm4-202ENSMUST00000171416 Kdm5bQ80Y84 1544 aa24.43■■□□□ 1.5
R3hdm4-202ENSMUST00000171416 Arap1Q4LDD4 1452 aa24.43■■□□□ 1.5
R3hdm4-202ENSMUST00000171416 Ccdc141E9Q8Q6 1531 aa24.41■■□□□ 1.5
R3hdm4-202ENSMUST00000171416 Rapgef6Q5NCJ1 1609 aa24.4■■□□□ 1.5
R3hdm4-202ENSMUST00000171416 Arhgef5E9Q7D5 1581 aa24.4■■□□□ 1.5
R3hdm4-202ENSMUST00000171416 Kif27Q7M6Z4 1394 aa24.4■■□□□ 1.5
R3hdm4-202ENSMUST00000171416 Setbp1Q9Z180 1582 aa24.38■■□□□ 1.49
R3hdm4-202ENSMUST00000171416 Igf1rQ60751 1373 aa24.35■■□□□ 1.49
R3hdm4-202ENSMUST00000171416 Ncoa2Q61026 1462 aa24.35■■□□□ 1.49
R3hdm4-202ENSMUST00000171416 Ap3b1Q9Z1T1 1105 aa24.35■■□□□ 1.49
R3hdm4-202ENSMUST00000171416 Pprc1Q6NZN1 1644 aa24.34■■□□□ 1.49
R3hdm4-202ENSMUST00000171416 Fkbp15Q6P9Q6 1216 aaKnown RBP24.34■■□□□ 1.49
R3hdm4-202ENSMUST00000171416 CntlnA2AM05 1397 aa24.34■■□□□ 1.49
R3hdm4-202ENSMUST00000171416 NhsB1AV60 1647 aa24.3■■□□□ 1.48
R3hdm4-202ENSMUST00000171416 Mroh2aD3Z750 1679 aa24.29■■□□□ 1.48
R3hdm4-202ENSMUST00000171416 Cul7Q8VE73 1689 aa24.29■■□□□ 1.48
R3hdm4-202ENSMUST00000171416 Peg3Q3URU2 1571 aa24.27■■□□□ 1.48
R3hdm4-202ENSMUST00000171416 Ak9G3UYQ4 1894 aa24.27■■□□□ 1.48
R3hdm4-202ENSMUST00000171416 Ttbk1Q6PCN3 1308 aa24.26■■□□□ 1.47
R3hdm4-202ENSMUST00000171416 Gcc2Q8CHG3 1679 aa24.25■■□□□ 1.47
R3hdm4-202ENSMUST00000171416 Arhgef11Q68FM7 1552 aa24.25■■□□□ 1.47
R3hdm4-202ENSMUST00000171416 Kiaa1210E9Q0C6 1637 aa24.23■■□□□ 1.47
R3hdm4-202ENSMUST00000171416 Lrrc9Q8CDN9 1456 aa24.23■■□□□ 1.47
R3hdm4-202ENSMUST00000171416 Magi1Q6RHR9 1471 aa24.22■■□□□ 1.47
R3hdm4-202ENSMUST00000171416 Tiam1Q60610 1591 aa24.22■■□□□ 1.47
R3hdm4-202ENSMUST00000171416 Fancd2Q80V62 1450 aa24.21■■□□□ 1.47
R3hdm4-202ENSMUST00000171416 Wdr7Q920I9 1489 aa24.2■■□□□ 1.47
R3hdm4-202ENSMUST00000171416 Naip1Q9QWK5 1403 aa24.19■■□□□ 1.46
R3hdm4-202ENSMUST00000171416 Ifnlr1Q8CGK5 535 aa24.17■■□□□ 1.46
R3hdm4-202ENSMUST00000171416 Gm1043A0A140LJC2 1431 aa24.17■■□□□ 1.46
R3hdm4-202ENSMUST00000171416 Mug1P28665 1476 aa24.15■■□□□ 1.46
R3hdm4-202ENSMUST00000171416 Ncoa3O09000 1398 aa24.15■■□□□ 1.46
R3hdm4-202ENSMUST00000171416 Dhx57Q6P5D3 1388 aaKnown RBP24.14■■□□□ 1.46
R3hdm4-202ENSMUST00000171416 Atp10dQ8K2X1 1416 aa24.14■■□□□ 1.45
R3hdm4-202ENSMUST00000171416 Fam163aQ8CAA5 168 aa24.14■■□□□ 1.45
R3hdm4-202ENSMUST00000171416 Znf608Q56A10 1511 aa24.14■■□□□ 1.45
R3hdm4-202ENSMUST00000171416 Clasp1Q80TV8 1535 aaKnown RBP24.12■■□□□ 1.45
R3hdm4-202ENSMUST00000171416 Kiaa1551Q5DTW7 1521 aa24.1■■□□□ 1.45
R3hdm4-202ENSMUST00000171416 Prex2Q3LAC4 1598 aa24.09■■□□□ 1.45
R3hdm4-202ENSMUST00000171416 Abca8bQ8K440 1620 aa24.09■■□□□ 1.45
R3hdm4-202ENSMUST00000171416 Cdc42bpaQ3UU96 1719 aa24.08■■□□□ 1.45
R3hdm4-202ENSMUST00000171416 Mapkbp1Q6NS57 1503 aa24.07■■□□□ 1.44
R3hdm4-202ENSMUST00000171416 Arid3cA6PWV5 409 aa24.06■■□□□ 1.44
R3hdm4-202ENSMUST00000171416 Ppp1r18Q8BQ30 594 aa24.06■■□□□ 1.44
R3hdm4-202ENSMUST00000171416 Lmod2Q3UHZ5 550 aa24.05■■□□□ 1.44
R3hdm4-202ENSMUST00000171416 Ttc37F8VPK0 1563 aa24.02■■□□□ 1.44
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms