RNA–Protein interactions for RNA: ENSMUST00000169965.7

Rpain-211, Transcript of RPA-interacting protein, mousemouse

TSL 1 (best) BASIC

Gene Rpain, Length 343 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpain-211ENSMUST00000169965 PtprtQ99M80 1454 aa13.55□□□□□ -0.24
Rpain-211ENSMUST00000169965 Chd1P40201 1711 aa13.54□□□□□ -0.24
Rpain-211ENSMUST00000169965 Pla2r1Q62028 1487 aa13.54□□□□□ -0.24
Rpain-211ENSMUST00000169965 Arhgap27A2AB59 869 aa13.53□□□□□ -0.24
Rpain-211ENSMUST00000169965 Top2aQ01320 1528 aaKnown RBP13.53□□□□□ -0.24
Rpain-211ENSMUST00000169965 NrkQ9R0G8 1455 aa13.51□□□□□ -0.25
Rpain-211ENSMUST00000169965 Ythdc2B2RR83 1445 aaKnown RBP13.51□□□□□ -0.25
Rpain-211ENSMUST00000169965 Ifnlr1Q8CGK5 535 aa13.51□□□□□ -0.25
Rpain-211ENSMUST00000169965 SynmQ70IV5 1561 aa13.5□□□□□ -0.25
Rpain-211ENSMUST00000169965 Shroom4Q1W617 1475 aa13.5□□□□□ -0.25
Rpain-211ENSMUST00000169965 Abca16E9PWJ7 1678 aa13.46□□□□□ -0.26
Rpain-211ENSMUST00000169965 WizO88286 1684 aaKnown RBP13.46□□□□□ -0.26
Rpain-211ENSMUST00000169965 Soga1E1U8D0 1418 aa13.46□□□□□ -0.26
Rpain-211ENSMUST00000169965 Pprc1Q6NZN1 1644 aa13.46□□□□□ -0.26
Rpain-211ENSMUST00000169965 Neo1P97798 1493 aa13.45□□□□□ -0.26
Rpain-211ENSMUST00000169965 Rapgef2Q8CHG7 1496 aa13.45□□□□□ -0.26
Rpain-211ENSMUST00000169965 Dnmt1P13864 1620 aaKnown RBP13.44□□□□□ -0.26
Rpain-211ENSMUST00000169965 Ppp1r18Q8BQ30 594 aa13.44□□□□□ -0.26
Rpain-211ENSMUST00000169965 CadpsQ80TJ1 1355 aa13.44□□□□□ -0.26
Rpain-211ENSMUST00000169965 BC005561E9Q5E2 1589 aa13.43□□□□□ -0.26
Rpain-211ENSMUST00000169965 Npm2Q80W85 207 aa13.42□□□□□ -0.26
Rpain-211ENSMUST00000169965 Abcc2Q8VI47 1543 aa13.42□□□□□ -0.26
Rpain-211ENSMUST00000169965 PxdnQ3UQ28 1475 aa13.42□□□□□ -0.26
Rpain-211ENSMUST00000169965 Fkbp15Q6P9Q6 1216 aaKnown RBP13.4□□□□□ -0.26
Rpain-211ENSMUST00000169965 TchhA0A0B4J1F9 1599 aa13.39□□□□□ -0.27
Rpain-211ENSMUST00000169965 Ak9G3UYQ4 1894 aa13.39□□□□□ -0.27
Rpain-211ENSMUST00000169965 Gpatch8A2A6A1 1505 aa13.36□□□□□ -0.27
Rpain-211ENSMUST00000169965 Gm14025A2AP89 1413 aa13.36□□□□□ -0.27
Rpain-211ENSMUST00000169965 EprsQ8CGC7 1512 aaKnown RBP13.35□□□□□ -0.27
Rpain-211ENSMUST00000169965 Map3k4O08648 1597 aa13.34□□□□□ -0.27
Rpain-211ENSMUST00000169965 Setbp1Q9Z180 1582 aa13.33□□□□□ -0.28
Rpain-211ENSMUST00000169965 Rpap1Q80TE0 1409 aa13.33□□□□□ -0.28
Rpain-211ENSMUST00000169965 Eif4g1Q6NZJ6 1600 aaKnown RBP13.33□□□□□ -0.28
Rpain-211ENSMUST00000169965 Adamts12Q811B3 1600 aa13.32□□□□□ -0.28
Rpain-211ENSMUST00000169965 Mroh2bQ7M6Y6 1581 aa13.31□□□□□ -0.28
Rpain-211ENSMUST00000169965 Arid3cA6PWV5 409 aa13.3□□□□□ -0.28
Rpain-211ENSMUST00000169965 Gab3Q8BSM5 595 aa13.3□□□□□ -0.28
Rpain-211ENSMUST00000169965 Plppr3Q7TPB0 716 aa13.29□□□□□ -0.28
Rpain-211ENSMUST00000169965 Slx4Q6P1D7 1565 aa13.28□□□□□ -0.28
Rpain-211ENSMUST00000169965 Jph4Q80WT0 628 aa13.28□□□□□ -0.28
Rpain-211ENSMUST00000169965 AI481877A2ALV5 1481 aa13.28□□□□□ -0.28
Rpain-211ENSMUST00000169965 Gm7298A0A0N4SVU1 1476 aa13.23□□□□□ -0.29
Rpain-211ENSMUST00000169965 Arhgef12Q8R4H2 1543 aaKnown RBP13.23□□□□□ -0.29
Rpain-211ENSMUST00000169965 Plekhg3Q4VAC9 1341 aa13.2□□□□□ -0.3
Rpain-211ENSMUST00000169965 Carmil1Q6EDY6 1374 aa13.2□□□□□ -0.3
Rpain-211ENSMUST00000169965 Abca5Q8K448 1642 aa13.19□□□□□ -0.3
Rpain-211ENSMUST00000169965 WrnO09053 1401 aa13.19□□□□□ -0.3
Rpain-211ENSMUST00000169965 Znf608Q56A10 1511 aa13.18□□□□□ -0.3
Rpain-211ENSMUST00000169965 Depdc5P61460 1591 aa13.18□□□□□ -0.3
Rpain-211ENSMUST00000169965 Arhgap35Q91YM2 1499 aa13.16□□□□□ -0.3
Rpain-211ENSMUST00000169965 Myt1lP97500 1187 aa13.16□□□□□ -0.3
Rpain-211ENSMUST00000169965 Ttc37F8VPK0 1563 aa13.15□□□□□ -0.3
Rpain-211ENSMUST00000169965 AdgbG3UZ78 1657 aa13.15□□□□□ -0.31
Rpain-211ENSMUST00000169965 Clasp1Q80TV8 1535 aaKnown RBP13.13□□□□□ -0.31
Rpain-211ENSMUST00000169965 Mapkbp1Q6NS57 1503 aa13.13□□□□□ -0.31
Rpain-211ENSMUST00000169965 Map3k1P53349 1493 aa13.12□□□□□ -0.31
Rpain-211ENSMUST00000169965 Lrrc9Q8CDN9 1456 aa13.12□□□□□ -0.31
Rpain-211ENSMUST00000169965 Dnajc5gQ8C632 165 aa13.12□□□□□ -0.31
Rpain-211ENSMUST00000169965 Cux1P53564 1515 aa13.12□□□□□ -0.31
Rpain-211ENSMUST00000169965 Polr1aO35134 1717 aaKnown RBP13.1□□□□□ -0.31
Rpain-211ENSMUST00000169965 Rrbp1Q99PL5 1605 aaKnown RBP13.09□□□□□ -0.31
Rpain-211ENSMUST00000169965 Cul7Q8VE73 1689 aa13.08□□□□□ -0.32
Rpain-211ENSMUST00000169965 Fndc1E9Q043 1732 aa13.08□□□□□ -0.32
Rpain-211ENSMUST00000169965 Igf1rQ60751 1373 aa13.07□□□□□ -0.32
Rpain-211ENSMUST00000169965 Clip1Q922J3 1391 aa13.06□□□□□ -0.32
Rpain-211ENSMUST00000169965 Zfyve16Q80U44 1528 aa13.05□□□□□ -0.32
Rpain-211ENSMUST00000169965 Kdm5bQ80Y84 1544 aa13.05□□□□□ -0.32
Rpain-211ENSMUST00000169965 Arhgap31A6X8Z5 1425 aa13.05□□□□□ -0.32
Rpain-211ENSMUST00000169965 Wdr7Q920I9 1489 aa13.04□□□□□ -0.32
Rpain-211ENSMUST00000169965 MlecQ6ZQI3 291 aaKnown RBP13.03□□□□□ -0.32
Rpain-211ENSMUST00000169965 Alpk3Q924C5 1678 aa13.02□□□□□ -0.32
Rpain-211ENSMUST00000169965 Arhgef11Q68FM7 1552 aa13.02□□□□□ -0.33
Rpain-211ENSMUST00000169965 NhsB1AV60 1647 aa13.02□□□□□ -0.33
Rpain-211ENSMUST00000169965 Ccdc141E9Q8Q6 1531 aa13□□□□□ -0.33
Rpain-211ENSMUST00000169965 Cep162Q6ZQ06 1403 aa13□□□□□ -0.33
Rpain-211ENSMUST00000169965 Atp10dQ8K2X1 1416 aa13□□□□□ -0.33
Rpain-211ENSMUST00000169965 Fyco1Q8VDC1 1437 aa13□□□□□ -0.33
Rpain-211ENSMUST00000169965 Mroh2aD3Z750 1679 aa12.98□□□□□ -0.33
Rpain-211ENSMUST00000169965 Gcc2Q8CHG3 1679 aa12.97□□□□□ -0.33
Rpain-211ENSMUST00000169965 Ap3b1Q9Z1T1 1105 aa12.97□□□□□ -0.33
Rpain-211ENSMUST00000169965 Ankrd26Q811D2 1581 aa12.93□□□□□ -0.34
Rpain-211ENSMUST00000169965 Aebp1Q640N1 1128 aa12.92□□□□□ -0.34
Rpain-211ENSMUST00000169965 Rapgef6Q5NCJ1 1609 aa12.91□□□□□ -0.34
Rpain-211ENSMUST00000169965 AglF8VPN4 1532 aa12.9□□□□□ -0.34
Rpain-211ENSMUST00000169965 Kif27Q7M6Z4 1394 aa12.89□□□□□ -0.35
Rpain-211ENSMUST00000169965 A2mQ6GQT1 1474 aa12.89□□□□□ -0.35
Rpain-211ENSMUST00000169965 Rnf17Q99MV7 1640 aa12.88□□□□□ -0.35
Rpain-211ENSMUST00000169965 Prex2Q3LAC4 1598 aa12.87□□□□□ -0.35
Rpain-211ENSMUST00000169965 Cyb5rlB1AS42 316 aa12.87□□□□□ -0.35
Rpain-211ENSMUST00000169965 Abca8bQ8K440 1620 aa12.87□□□□□ -0.35
Rpain-211ENSMUST00000169965 Ncoa2Q61026 1462 aa12.86□□□□□ -0.35
Rpain-211ENSMUST00000169965 Fancd2Q80V62 1450 aa12.86□□□□□ -0.35
Rpain-211ENSMUST00000169965 HrcG5E8J6 738 aa12.85□□□□□ -0.35
Rpain-211ENSMUST00000169965 Kdm6bQ5NCY0 1641 aa12.84□□□□□ -0.35
Rpain-211ENSMUST00000169965 Arap1Q4LDD4 1452 aa12.83□□□□□ -0.36
Rpain-211ENSMUST00000169965 Magi1Q6RHR9 1471 aa12.83□□□□□ -0.36
Rpain-211ENSMUST00000169965 Qser1A2BIE1 1698 aa12.82□□□□□ -0.36
Rpain-211ENSMUST00000169965 Kiaa1210E9Q0C6 1637 aa12.81□□□□□ -0.36
Rpain-211ENSMUST00000169965 Setd5Q5XJV7 1441 aa12.81□□□□□ -0.36
Rpain-211ENSMUST00000169965 Brwd3A2AHJ4 1799 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms