RNA–Protein interactions for RNA: ENSMUST00000109546.8

Vcan-203, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 12,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-203ENSMUST00000109546 Ddrgk1Q80WW9 315 aa7.88□□□□□ -1.15
Vcan-203ENSMUST00000109546 Hsp90b1P08113 802 aaKnown RBP7.88□□□□□ -1.15
Vcan-203ENSMUST00000109546 BccipQ9CWI3 316 aa7.87□□□□□ -1.15
Vcan-203ENSMUST00000109546 Trim30dE9PWL0 497 aa7.87□□□□□ -1.15
Vcan-203ENSMUST00000109546 Plcb2A3KGF7 1181 aa7.86□□□□□ -1.15
Vcan-203ENSMUST00000109546 Mbd3Q9Z2D8 285 aaKnown RBP7.85□□□□□ -1.15
Vcan-203ENSMUST00000109546 Ftsj3Q9DBE9 838 aaKnown RBP7.85□□□□□ -1.15
Vcan-203ENSMUST00000109546 Zrsr2Q62377 462 aaKnown RBP7.84□□□□□ -1.15
Vcan-203ENSMUST00000109546 Mier1Q5UAK0 511 aa7.84□□□□□ -1.15
Vcan-203ENSMUST00000109546 Pknox2Q8BG99 474 aa7.84□□□□□ -1.15
Vcan-203ENSMUST00000109546 Wwc2Q6NXJ0 1187 aa7.83□□□□□ -1.16
Vcan-203ENSMUST00000109546 Dcaf1Q80TR8 1506 aa7.82□□□□□ -1.16
Vcan-203ENSMUST00000109546 Fgd1P52734 960 aa7.82□□□□□ -1.16
Vcan-203ENSMUST00000109546 Erich6bQ9D4S6 220 aa7.81□□□□□ -1.16
Vcan-203ENSMUST00000109546 Becn1O88597 448 aa7.8□□□□□ -1.16
Vcan-203ENSMUST00000109546 Pes1Q9EQ61 584 aaKnown RBP7.8□□□□□ -1.16
Vcan-203ENSMUST00000109546 VgfQ0VGU4 617 aa7.8□□□□□ -1.16
Vcan-203ENSMUST00000109546 Cwc15Q9JHS9 229 aaKnown RBP7.8□□□□□ -1.16
Vcan-203ENSMUST00000109546 Vsig10D3YX43 558 aa7.8□□□□□ -1.16
Vcan-203ENSMUST00000109546 Podxl2Q8CAE9 603 aa7.8□□□□□ -1.16
Vcan-203ENSMUST00000109546 Chaf1aQ9QWF0 911 aa7.79□□□□□ -1.16
Vcan-203ENSMUST00000109546 Dnttip2Q8R2M2 758 aaKnown RBP7.79□□□□□ -1.16
Vcan-203ENSMUST00000109546 MccE9PWI3 1003 aa7.78□□□□□ -1.16
Vcan-203ENSMUST00000109546 Zfp777B9EKF4 885 aa7.78□□□□□ -1.16
Vcan-203ENSMUST00000109546 Ccdc34Q3UI66 367 aa7.78□□□□□ -1.16
Vcan-203ENSMUST00000109546 Fbxo2Q80UW2 297 aa7.78□□□□□ -1.16
Vcan-203ENSMUST00000109546 Tpm3-rs7D3Z2H9 248 aa7.77□□□□□ -1.17
Vcan-203ENSMUST00000109546 KnstrnQ9D9Z1 312 aaKnown RBP7.77□□□□□ -1.17
Vcan-203ENSMUST00000109546 Ush1cQ9ES64 910 aa7.77□□□□□ -1.17
Vcan-203ENSMUST00000109546 Cspp1B2RX88 1205 aa7.77□□□□□ -1.17
Vcan-203ENSMUST00000109546 Fam71e1A1L3C1 212 aa7.77□□□□□ -1.17
Vcan-203ENSMUST00000109546 Pde3bQ61409 1100 aa7.77□□□□□ -1.17
Vcan-203ENSMUST00000109546 Trim30aP15533 496 aa7.76□□□□□ -1.17
Vcan-203ENSMUST00000109546 Glipr1l2Q9CQ35 332 aa7.75□□□□□ -1.17
Vcan-203ENSMUST00000109546 Sycp1Q62209 993 aa7.75□□□□□ -1.17
Vcan-203ENSMUST00000109546 Kiaa0754Q69ZZ9 979 aa7.75□□□□□ -1.17
Vcan-203ENSMUST00000109546 Hmgb1P63158 215 aaKnown RBP7.75□□□□□ -1.17
Vcan-203ENSMUST00000109546 Gm13697A2AK42 830 aa7.74□□□□□ -1.17
Vcan-203ENSMUST00000109546 Dctn1O08788 1281 aa7.74□□□□□ -1.17
Vcan-203ENSMUST00000109546 AppP12023 770 aa7.73□□□□□ -1.17
Vcan-203ENSMUST00000109546 Tpm3P21107 285 aaKnown RBP7.73□□□□□ -1.17
Vcan-203ENSMUST00000109546 Dnai2A2AC93 623 aa7.73□□□□□ -1.17
Vcan-203ENSMUST00000109546 Ppargc1bQ8VHJ7 1014 aa7.73□□□□□ -1.17
Vcan-203ENSMUST00000109546 Taf3Q5HZG4 932 aa7.72□□□□□ -1.17
Vcan-203ENSMUST00000109546 1700123L14RikQ3V2K7 440 aa7.72□□□□□ -1.17
Vcan-203ENSMUST00000109546 Anp32eP97822 260 aaKnown RBP7.71□□□□□ -1.17
Vcan-203ENSMUST00000109546 R3hcc1Q8BSI6 488 aa7.71□□□□□ -1.17
Vcan-203ENSMUST00000109546 Hap1O35668 628 aa7.71□□□□□ -1.18
Vcan-203ENSMUST00000109546 Gtf3c3Q3TMP1 882 aa7.7□□□□□ -1.18
Vcan-203ENSMUST00000109546 Ppm1eQ80TL0 749 aa7.7□□□□□ -1.18
Vcan-203ENSMUST00000109546 Dnai1Q8C0M8 701 aa7.69□□□□□ -1.18
Vcan-203ENSMUST00000109546 Smarce1O54941 411 aaKnown RBP7.69□□□□□ -1.18
Vcan-203ENSMUST00000109546 Pdcl3Q8BVF2 240 aa7.68□□□□□ -1.18
Vcan-203ENSMUST00000109546 Gps2Q921N8 327 aa7.68□□□□□ -1.18
Vcan-203ENSMUST00000109546 Trim26Q99PN3 545 aa7.68□□□□□ -1.18
Vcan-203ENSMUST00000109546 Tcerg1Q8CGF7 1100 aaKnown RBP7.68□□□□□ -1.18
Vcan-203ENSMUST00000109546 Mrvi1Q9WUX5 899 aaKnown RBP7.67□□□□□ -1.18
Vcan-203ENSMUST00000109546 Mrs2Q5NCE8 434 aa7.67□□□□□ -1.18
Vcan-203ENSMUST00000109546 Kif3cO35066 796 aa7.67□□□□□ -1.18
Vcan-203ENSMUST00000109546 Hnrnpul2Q00PI9 745 aaKnown RBP7.67□□□□□ -1.18
Vcan-203ENSMUST00000109546 Ap3b1Q9Z1T1 1105 aa7.67□□□□□ -1.18
Vcan-203ENSMUST00000109546 Atp6v1dP57746 247 aa7.67□□□□□ -1.18
Vcan-203ENSMUST00000109546 Gm38655A0A286YDK6 273 aa7.67□□□□□ -1.18
Vcan-203ENSMUST00000109546 Noc3lQ8VI84 807 aaKnown RBP7.67□□□□□ -1.18
Vcan-203ENSMUST00000109546 Ralbp1Q62172 648 aa7.66□□□□□ -1.18
Vcan-203ENSMUST00000109546 Gm13695A2AK44 830 aa7.66□□□□□ -1.18
Vcan-203ENSMUST00000109546 HnrnpuQ8VEK3 800 aaKnown RBP7.66□□□□□ -1.18
Vcan-203ENSMUST00000109546 Tpm1P58771 284 aa7.66□□□□□ -1.18
Vcan-203ENSMUST00000109546 Fam43aQ8BUP8 424 aa7.66□□□□□ -1.18
Vcan-203ENSMUST00000109546 Clstn2Q9ER65 966 aa7.66□□□□□ -1.18
Vcan-203ENSMUST00000109546 Mapk8ip3Q9ESN9 1337 aa7.65□□□□□ -1.18
Vcan-203ENSMUST00000109546 Ipo9Q91YE6 1041 aa7.65□□□□□ -1.18
Vcan-203ENSMUST00000109546 Il27Q8K3I6 234 aa7.65□□□□□ -1.19
Vcan-203ENSMUST00000109546 Tmx4Q8C0L0 335 aa7.64□□□□□ -1.19
Vcan-203ENSMUST00000109546 Atp1b4Q99ME6 356 aa7.64□□□□□ -1.19
Vcan-203ENSMUST00000109546 Taok2Q6ZQ29 1240 aa7.64□□□□□ -1.19
Vcan-203ENSMUST00000109546 Rrp9Q91WM3 475 aaKnown RBP7.64□□□□□ -1.19
Vcan-203ENSMUST00000109546 Tpm4Q6IRU2 248 aa7.63□□□□□ -1.19
Vcan-203ENSMUST00000109546 Sall2Q9QX96 1004 aa7.63□□□□□ -1.19
Vcan-203ENSMUST00000109546 Znf771Q8BJ90 317 aa7.63□□□□□ -1.19
Vcan-203ENSMUST00000109546 Ofd1Q80Z25 1017 aa7.63□□□□□ -1.19
Vcan-203ENSMUST00000109546 Rufy1Q8BIJ7 712 aa7.63□□□□□ -1.19
Vcan-203ENSMUST00000109546 Dhx8A2A4P0 1244 aaKnown RBP7.63□□□□□ -1.19
Vcan-203ENSMUST00000109546 Trim55G3X8Y1 545 aa7.62□□□□□ -1.19
Vcan-203ENSMUST00000109546 NudcO35685 332 aaKnown RBP7.62□□□□□ -1.19
Vcan-203ENSMUST00000109546 Ipo7Q9EPL8 1038 aaKnown RBP7.62□□□□□ -1.19
Vcan-203ENSMUST00000109546 A0A1L1SQF0 893 aa7.62□□□□□ -1.19
Vcan-203ENSMUST00000109546 Def6Q8C2K1 630 aa7.62□□□□□ -1.19
Vcan-203ENSMUST00000109546 Tpm2P58774 284 aa7.62□□□□□ -1.19
Vcan-203ENSMUST00000109546 Eif4g2Q62448 906 aaKnown RBP7.62□□□□□ -1.19
Vcan-203ENSMUST00000109546 Anapc15P60007 132 aa7.61□□□□□ -1.19
Vcan-203ENSMUST00000109546 Znhit6Q3UFB2 460 aaKnown RBP7.61□□□□□ -1.19
Vcan-203ENSMUST00000109546 Rad21Q61550 635 aaKnown RBP7.6□□□□□ -1.19
Vcan-203ENSMUST00000109546 Kif3aP28741 701 aa7.6□□□□□ -1.19
Vcan-203ENSMUST00000109546 Chic1Q8CBW7 227 aa7.6□□□□□ -1.19
Vcan-203ENSMUST00000109546 Erich6D3Z6S9 713 aa7.59□□□□□ -1.19
Vcan-203ENSMUST00000109546 Pcmtd1P59913 357 aa7.59□□□□□ -1.19
Vcan-203ENSMUST00000109546 Ak7Q9D2H2 614 aa7.59□□□□□ -1.19
Vcan-203ENSMUST00000109546 Iqcf3Q9D498 203 aa7.59□□□□□ -1.19
Vcan-203ENSMUST00000109546 Arid4bA2CG63 1314 aaKnown RBP7.59□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 62.9 ms