RNA–Protein interactions for RNA: ENSMUST00000109546.8

Vcan-203, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 12,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-203ENSMUST00000109546 Cngb1E1AZ71 1325 aa10.39□□□□□ -0.75
Vcan-203ENSMUST00000109546 Rpgrip1Q9EPQ2 1331 aa10.36□□□□□ -0.75
Vcan-203ENSMUST00000109546 Las1lA2BE28 776 aaKnown RBP10.27□□□□□ -0.76
Vcan-203ENSMUST00000109546 Pelp1Q9DBD5 1123 aaKnown RBP10.25□□□□□ -0.77
Vcan-203ENSMUST00000109546 Wdr66E9Q743 1299 aa9.85□□□□□ -0.83
Vcan-203ENSMUST00000109546 4930567H17RikQ3V0K5 233 aa9.73□□□□□ -0.85
Vcan-203ENSMUST00000109546 Rhox8Q6VSS7 320 aa9.72□□□□□ -0.85
Vcan-203ENSMUST00000109546 Myt1Q8CFC2 1127 aa9.71□□□□□ -0.85
Vcan-203ENSMUST00000109546 Amer1Q7TS75 1132 aa9.63□□□□□ -0.87
Vcan-203ENSMUST00000109546 CenpbP27790 599 aa9.53□□□□□ -0.88
Vcan-203ENSMUST00000109546 Stra8P70278 393 aa9.36□□□□□ -0.91
Vcan-203ENSMUST00000109546 Rtl5Q5DTT4 599 aa9.18□□□□□ -0.94
Vcan-203ENSMUST00000109546 Ythdc1E9Q5K9 736 aaKnown RBP9.04□□□□□ -0.96
Vcan-203ENSMUST00000109546 4933416C03RikQ3V063 378 aa9.04□□□□□ -0.96
Vcan-203ENSMUST00000109546 Tnnt3Q9QZ47 272 aa9.02□□□□□ -0.97
Vcan-203ENSMUST00000109546 DiexfQ8BTT6 772 aaKnown RBP8.98□□□□□ -0.97
Vcan-203ENSMUST00000109546 Rtl1Q7M732 1744 aa8.98□□□□□ -0.97
Vcan-203ENSMUST00000109546 Zeb1Q64318 1117 aa8.97□□□□□ -0.97
Vcan-203ENSMUST00000109546 NefmP08553 848 aa8.96□□□□□ -0.97
Vcan-203ENSMUST00000109546 Ttbk1Q6PCN3 1308 aa8.94□□□□□ -0.98
Vcan-203ENSMUST00000109546 Ube2uB1AUC4 352 aa8.92□□□□□ -0.98
Vcan-203ENSMUST00000109546 NeflP08551 543 aa8.89□□□□□ -0.99
Vcan-203ENSMUST00000109546 Acin1Q9JIX8 1338 aaKnown RBP8.85□□□□□ -0.99
Vcan-203ENSMUST00000109546 Anp32bQ9EST5 272 aaKnown RBP8.8□□□□□ -1
Vcan-203ENSMUST00000109546 Cdk11bP24788 784 aaKnown RBP8.79□□□□□ -1
Vcan-203ENSMUST00000109546 Ehmt2Q9Z148 1263 aaKnown RBP8.78□□□□□ -1
Vcan-203ENSMUST00000109546 Ccdc180J3QNE4 1664 aa8.78□□□□□ -1
Vcan-203ENSMUST00000109546 Ccdc9Q8VC31 543 aaKnown RBP8.74□□□□□ -1.01
Vcan-203ENSMUST00000109546 Myt1lP97500 1187 aa8.7□□□□□ -1.02
Vcan-203ENSMUST00000109546 NrdcQ8BHG1 1161 aa8.68□□□□□ -1.02
Vcan-203ENSMUST00000109546 HrcG5E8J6 738 aa8.64□□□□□ -1.03
Vcan-203ENSMUST00000109546 Neurod1Q60867 357 aa8.61□□□□□ -1.03
Vcan-203ENSMUST00000109546 CatipB9EKE5 520 aa8.59□□□□□ -1.03
Vcan-203ENSMUST00000109546 Anp32aO35381 247 aa8.57□□□□□ -1.04
Vcan-203ENSMUST00000109546 Trim41Q5NCC3 630 aa8.56□□□□□ -1.04
Vcan-203ENSMUST00000109546 Nop58Q6DFW4 536 aaKnown RBP8.56□□□□□ -1.04
Vcan-203ENSMUST00000109546 Slc24a1Q91WD8 1130 aa8.55□□□□□ -1.04
Vcan-203ENSMUST00000109546 Npm2Q80W85 207 aa8.54□□□□□ -1.04
Vcan-203ENSMUST00000109546 DaxxO35613 739 aa8.53□□□□□ -1.04
Vcan-203ENSMUST00000109546 Esf1Q3V1V3 845 aaKnown RBP8.53□□□□□ -1.04
Vcan-203ENSMUST00000109546 Pcgf6Q99NA9 353 aa8.49□□□□□ -1.05
Vcan-203ENSMUST00000109546 Upf2A2AT37 1269 aaKnown RBP8.44□□□□□ -1.06
Vcan-203ENSMUST00000109546 Polr3glQ8R0C0 218 aa8.38□□□□□ -1.07
Vcan-203ENSMUST00000109546 Supt5hO55201 1082 aaKnown RBP8.37□□□□□ -1.07
Vcan-203ENSMUST00000109546 Eif5bQ05D44 1216 aaKnown RBP8.37□□□□□ -1.07
Vcan-203ENSMUST00000109546 Adam1bQ8R534 806 aa8.37□□□□□ -1.07
Vcan-203ENSMUST00000109546 NclP09405 707 aaKnown RBP8.35□□□□□ -1.07
Vcan-203ENSMUST00000109546 Gab3Q8BSM5 595 aa8.33□□□□□ -1.08
Vcan-203ENSMUST00000109546 Trim44Q9QXA7 346 aa8.32□□□□□ -1.08
Vcan-203ENSMUST00000109546 UbtfP25976 765 aaKnown RBP8.31□□□□□ -1.08
Vcan-203ENSMUST00000109546 Hsp90aa1P07901 733 aaKnown RBP8.31□□□□□ -1.08
Vcan-203ENSMUST00000109546 Ccdc136Q3TVA9 1136 aa8.31□□□□□ -1.08
Vcan-203ENSMUST00000109546 Aplp2Q06335 707 aa8.31□□□□□ -1.08
Vcan-203ENSMUST00000109546 Tnnt2P50752 301 aa8.27□□□□□ -1.09
Vcan-203ENSMUST00000109546 TonslQ6NZL6 1363 aa8.26□□□□□ -1.09
Vcan-203ENSMUST00000109546 ClspnQ80YR7 1315 aa8.25□□□□□ -1.09
Vcan-203ENSMUST00000109546 Lmod3E9QA62 571 aa8.24□□□□□ -1.09
Vcan-203ENSMUST00000109546 Hdac5Q9Z2V6 1113 aa8.2□□□□□ -1.1
Vcan-203ENSMUST00000109546 Calcoco2A2A6M5 331 aa8.2□□□□□ -1.1
Vcan-203ENSMUST00000109546 Os9Q8K2C7 672 aa8.17□□□□□ -1.1
Vcan-203ENSMUST00000109546 Anks4bQ8K3X6 423 aa8.17□□□□□ -1.1
Vcan-203ENSMUST00000109546 Htatsf1Q8BGC0 757 aa8.17□□□□□ -1.1
Vcan-203ENSMUST00000109546 Map7d2A2AG50 781 aa8.15□□□□□ -1.1
Vcan-203ENSMUST00000109546 Rangap1P46061 589 aaKnown RBP8.13□□□□□ -1.11
Vcan-203ENSMUST00000109546 Ccdc27Q3V036 639 aa8.13□□□□□ -1.11
Vcan-203ENSMUST00000109546 SetQ9EQU5 289 aaKnown RBP8.13□□□□□ -1.11
Vcan-203ENSMUST00000109546 Znf326O88291 580 aa8.11□□□□□ -1.11
Vcan-203ENSMUST00000109546 Irx3P81067 507 aa8.1□□□□□ -1.11
Vcan-203ENSMUST00000109546 DekQ7TNV0 380 aaKnown RBP8.09□□□□□ -1.11
Vcan-203ENSMUST00000109546 Fam50aQ9WV03 339 aaKnown RBP8.08□□□□□ -1.12
Vcan-203ENSMUST00000109546 AU015836B2RUM3 263 aa8.08□□□□□ -1.12
Vcan-203ENSMUST00000109546 Mak16Q8BGS0 296 aaKnown RBP8.06□□□□□ -1.12
Vcan-203ENSMUST00000109546 Wdr43Q6ZQL4 677 aaKnown RBP8.06□□□□□ -1.12
Vcan-203ENSMUST00000109546 PtmaP26350 111 aa8.05□□□□□ -1.12
Vcan-203ENSMUST00000109546 Gm973E9Q295 1059 aa8.04□□□□□ -1.12
Vcan-203ENSMUST00000109546 Nlrp6Q91WS2 869 aa8.04□□□□□ -1.12
Vcan-203ENSMUST00000109546 Calr4Q3TQS0 420 aa8.03□□□□□ -1.12
Vcan-203ENSMUST00000109546 MsnP26041 577 aaKnown RBP8.03□□□□□ -1.12
Vcan-203ENSMUST00000109546 CalrP14211 416 aaKnown RBP8.02□□□□□ -1.13
Vcan-203ENSMUST00000109546 Bcl11aQ9QYE3 773 aa8.02□□□□□ -1.13
Vcan-203ENSMUST00000109546 4933402E13RikQ9D4D2 429 aa8.01□□□□□ -1.13
Vcan-203ENSMUST00000109546 Dusp9Q7TNL7 452 aa8.01□□□□□ -1.13
Vcan-203ENSMUST00000109546 PtmsQ9D0J8 101 aaKnown RBP8.01□□□□□ -1.13
Vcan-203ENSMUST00000109546 Ppm1gQ61074 542 aa7.99□□□□□ -1.13
Vcan-203ENSMUST00000109546 Q8BT18 775 aa7.99□□□□□ -1.13
Vcan-203ENSMUST00000109546 Ppp4r2Q0VGB7 417 aa7.97□□□□□ -1.13
Vcan-203ENSMUST00000109546 CanxP35564 591 aaKnown RBP7.96□□□□□ -1.13
Vcan-203ENSMUST00000109546 PnnO35691 725 aaKnown RBP7.95□□□□□ -1.14
Vcan-203ENSMUST00000109546 Hsp90ab1P11499 724 aaKnown RBP7.95□□□□□ -1.14
Vcan-203ENSMUST00000109546 Znf316Q6PGE4 1016 aa7.95□□□□□ -1.14
Vcan-203ENSMUST00000109546 Csrnp3P59055 597 aa7.94□□□□□ -1.14
Vcan-203ENSMUST00000109546 Chmp4bQ9D8B3 224 aaKnown RBP7.93□□□□□ -1.14
Vcan-203ENSMUST00000109546 Casc1Q6TDU8 730 aa7.93□□□□□ -1.14
Vcan-203ENSMUST00000109546 ArxO35085 564 aa7.92□□□□□ -1.14
Vcan-203ENSMUST00000109546 Ccer2J3QPU5 274 aa7.92□□□□□ -1.14
Vcan-203ENSMUST00000109546 Rrp12Q6P5B0 1295 aaKnown RBP7.92□□□□□ -1.14
Vcan-203ENSMUST00000109546 Cald1E9QA15 768 aaKnown RBP7.9□□□□□ -1.14
Vcan-203ENSMUST00000109546 Map7O88735 730 aa7.9□□□□□ -1.15
Vcan-203ENSMUST00000109546 RdxP26043 583 aaKnown RBP7.89□□□□□ -1.15
Vcan-203ENSMUST00000109546 NischQ80TM9 1593 aa7.89□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 87.6 ms