RNA–Protein interactions for RNA: ENSMUST00000097822.9

Ubr4-201, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ubr4, Length 15,928 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-201ENSMUST00000097822 Htatsf1Q8BGC0 757 aa7.98□□□□□ -1.13
Ubr4-201ENSMUST00000097822 Chic1Q8CBW7 227 aa7.98□□□□□ -1.13
Ubr4-201ENSMUST00000097822 Hsp90ab1P11499 724 aaKnown RBP7.98□□□□□ -1.13
Ubr4-201ENSMUST00000097822 Ipo9Q91YE6 1041 aa7.98□□□□□ -1.13
Ubr4-201ENSMUST00000097822 Rtn4Q99P72 1162 aaKnown RBP7.97□□□□□ -1.13
Ubr4-201ENSMUST00000097822 Rad21Q61550 635 aaKnown RBP7.97□□□□□ -1.13
Ubr4-201ENSMUST00000097822 Lmod2Q3UHZ5 550 aa7.97□□□□□ -1.13
Ubr4-201ENSMUST00000097822 Zcchc6Q5BLK4 1491 aaKnown RBP7.96□□□□□ -1.14
Ubr4-201ENSMUST00000097822 Spryd3E9Q9B3 442 aa7.96□□□□□ -1.14
Ubr4-201ENSMUST00000097822 Trim30dE9PWL0 497 aa7.96□□□□□ -1.14
Ubr4-201ENSMUST00000097822 Os9Q8K2C7 672 aa7.96□□□□□ -1.14
Ubr4-201ENSMUST00000097822 Dnttip2Q8R2M2 758 aaKnown RBP7.95□□□□□ -1.14
Ubr4-201ENSMUST00000097822 Polr3glQ8R0C0 218 aa7.95□□□□□ -1.14
Ubr4-201ENSMUST00000097822 Ppm1gQ61074 542 aa7.95□□□□□ -1.14
Ubr4-201ENSMUST00000097822 Clip1Q922J3 1391 aa7.93□□□□□ -1.14
Ubr4-201ENSMUST00000097822 Ofd1Q80Z25 1017 aa7.93□□□□□ -1.14
Ubr4-201ENSMUST00000097822 Tcerg1Q8CGF7 1100 aaKnown RBP7.93□□□□□ -1.14
Ubr4-201ENSMUST00000097822 Plcb2A3KGF7 1181 aa7.92□□□□□ -1.14
Ubr4-201ENSMUST00000097822 PtmaP26350 111 aa7.9□□□□□ -1.14
Ubr4-201ENSMUST00000097822 Nlrp6Q91WS2 869 aa7.9□□□□□ -1.15
Ubr4-201ENSMUST00000097822 Abcc9P70170 1546 aa7.88□□□□□ -1.15
Ubr4-201ENSMUST00000097822 Ccer2J3QPU5 274 aa7.87□□□□□ -1.15
Ubr4-201ENSMUST00000097822 Arid4bA2CG63 1314 aaKnown RBP7.87□□□□□ -1.15
Ubr4-201ENSMUST00000097822 B4galnt3Q6L8S8 986 aa7.87□□□□□ -1.15
Ubr4-201ENSMUST00000097822 Rrp12Q6P5B0 1295 aaKnown RBP7.86□□□□□ -1.15
Ubr4-201ENSMUST00000097822 Znf316Q6PGE4 1016 aa7.86□□□□□ -1.15
Ubr4-201ENSMUST00000097822 Dbr1Q923B1 550 aa7.86□□□□□ -1.15
Ubr4-201ENSMUST00000097822 IbspQ61711 324 aa7.86□□□□□ -1.15
Ubr4-201ENSMUST00000097822 Pdcl3Q8BVF2 240 aa7.86□□□□□ -1.15
Ubr4-201ENSMUST00000097822 Ipo4Q8VI75 1082 aa7.85□□□□□ -1.15
Ubr4-201ENSMUST00000097822 Dnai1Q8C0M8 701 aa7.85□□□□□ -1.15
Ubr4-201ENSMUST00000097822 ChgaP26339 463 aaKnown RBP7.84□□□□□ -1.15
Ubr4-201ENSMUST00000097822 Fgd1P52734 960 aa7.84□□□□□ -1.15
Ubr4-201ENSMUST00000097822 Erich6bQ9D4S6 220 aa7.83□□□□□ -1.16
Ubr4-201ENSMUST00000097822 Prdm10Q3UTQ7 1184 aa7.82□□□□□ -1.16
Ubr4-201ENSMUST00000097822 BccipQ9CWI3 316 aa7.81□□□□□ -1.16
Ubr4-201ENSMUST00000097822 Znf326O88291 580 aa7.81□□□□□ -1.16
Ubr4-201ENSMUST00000097822 MsnP26041 577 aaKnown RBP7.8□□□□□ -1.16
Ubr4-201ENSMUST00000097822 Rangap1P46061 589 aaKnown RBP7.8□□□□□ -1.16
Ubr4-201ENSMUST00000097822 Apbb1Q9QXJ1 710 aa7.8□□□□□ -1.16
Ubr4-201ENSMUST00000097822 Trim26Q99PN3 545 aa7.79□□□□□ -1.16
Ubr4-201ENSMUST00000097822 Fbxo2Q80UW2 297 aa7.78□□□□□ -1.16
Ubr4-201ENSMUST00000097822 Ddrgk1Q80WW9 315 aa7.77□□□□□ -1.17
Ubr4-201ENSMUST00000097822 Rrp9Q91WM3 475 aaKnown RBP7.77□□□□□ -1.17
Ubr4-201ENSMUST00000097822 Wwc2Q6NXJ0 1187 aa7.76□□□□□ -1.17
Ubr4-201ENSMUST00000097822 4933402E13RikQ9D4D2 429 aa7.76□□□□□ -1.17
Ubr4-201ENSMUST00000097822 Adam1bQ8R534 806 aa7.76□□□□□ -1.17
Ubr4-201ENSMUST00000097822 Chmp5Q9D7S9 219 aa7.76□□□□□ -1.17
Ubr4-201ENSMUST00000097822 VgfQ0VGU4 617 aa7.75□□□□□ -1.17
Ubr4-201ENSMUST00000097822 Gm13697A2AK42 830 aa7.75□□□□□ -1.17
Ubr4-201ENSMUST00000097822 EspnQ9ET47 871 aa7.75□□□□□ -1.17
Ubr4-201ENSMUST00000097822 Pak3Q61036 559 aa7.74□□□□□ -1.17
Ubr4-201ENSMUST00000097822 Chic2Q9D9G3 165 aa7.73□□□□□ -1.17
Ubr4-201ENSMUST00000097822 Mre11Q61216 706 aa7.72□□□□□ -1.17
Ubr4-201ENSMUST00000097822 Ipo8Q7TMY7 1010 aa7.72□□□□□ -1.17
Ubr4-201ENSMUST00000097822 Gtf2a1Q99PM3 378 aa7.72□□□□□ -1.17
Ubr4-201ENSMUST00000097822 SlkO54988 1233 aa7.72□□□□□ -1.17
Ubr4-201ENSMUST00000097822 Armcx1Q9CX83 456 aa7.72□□□□□ -1.17
Ubr4-201ENSMUST00000097822 Mbd3Q9Z2D8 285 aaKnown RBP7.72□□□□□ -1.17
Ubr4-201ENSMUST00000097822 Sart3Q9JLI8 962 aaKnown RBP7.71□□□□□ -1.17
Ubr4-201ENSMUST00000097822 Znf692Q3U381 531 aa7.71□□□□□ -1.18
Ubr4-201ENSMUST00000097822 BlmO88700 1416 aa7.7□□□□□ -1.18
Ubr4-201ENSMUST00000097822 Becn1O88597 448 aa7.69□□□□□ -1.18
Ubr4-201ENSMUST00000097822 Znf710Q3U288 666 aa7.69□□□□□ -1.18
Ubr4-201ENSMUST00000097822 Gtf3c5Q8R2T8 520 aa7.69□□□□□ -1.18
Ubr4-201ENSMUST00000097822 Map7d2A2AG50 781 aa7.69□□□□□ -1.18
Ubr4-201ENSMUST00000097822 Podxl2Q8CAE9 603 aa7.69□□□□□ -1.18
Ubr4-201ENSMUST00000097822 Gm6268A2A3U9 297 aa7.69□□□□□ -1.18
Ubr4-201ENSMUST00000097822 Casc1Q6TDU8 730 aa7.68□□□□□ -1.18
Ubr4-201ENSMUST00000097822 Hspa5P20029 655 aaKnown RBP7.68□□□□□ -1.18
Ubr4-201ENSMUST00000097822 Sin3aQ60520 1274 aaKnown RBP7.68□□□□□ -1.18
Ubr4-201ENSMUST00000097822 Ush1cQ9ES64 910 aa7.68□□□□□ -1.18
Ubr4-201ENSMUST00000097822 Neurod2Q62414 383 aa7.67□□□□□ -1.18
Ubr4-201ENSMUST00000097822 Exoc6Q8R313 802 aa7.67□□□□□ -1.18
Ubr4-201ENSMUST00000097822 Map7O88735 730 aa7.67□□□□□ -1.18
Ubr4-201ENSMUST00000097822 TimelessQ9R1X4 1197 aa7.67□□□□□ -1.18
Ubr4-201ENSMUST00000097822 Rwdd1Q9CQK7 243 aa7.67□□□□□ -1.18
Ubr4-201ENSMUST00000097822 Kiaa0754Q69ZZ9 979 aa7.66□□□□□ -1.18
Ubr4-201ENSMUST00000097822 Fam43aQ8BUP8 424 aa7.66□□□□□ -1.18
Ubr4-201ENSMUST00000097822 DmtnQ9WV69 405 aa7.66□□□□□ -1.18
Ubr4-201ENSMUST00000097822 Erich6D3Z6S9 713 aa7.65□□□□□ -1.18
Ubr4-201ENSMUST00000097822 Iqcf3Q9D498 203 aa7.65□□□□□ -1.18
Ubr4-201ENSMUST00000097822 Rgl3Q3UYI5 709 aa7.65□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Brd4Q9ESU6 1400 aaKnown RBP7.64□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Stard8Q8K031 1019 aa7.64□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Tpm2P58774 284 aa7.64□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Gpatch11Q3UFS4 262 aa7.63□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Gm13695A2AK44 830 aa7.63□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Rbm10Q99KG3 930 aaKnown RBP7.63□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Trim30aP15533 496 aa7.62□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Gm35339A0A140LHH9 1649 aa7.62□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Rsf1E9PWW9 1441 aaKnown RBP7.62□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Cwc22Q8C5N3 908 aaKnown RBP7.62□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Abcc8B2RUS7 1588 aa7.62□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Mapk8ip3Q9ESN9 1337 aa7.61□□□□□ -1.19
Ubr4-201ENSMUST00000097822 NudcO35685 332 aaKnown RBP7.61□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Calcoco2A2A6M5 331 aa7.61□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Card11Q8CIS0 1159 aa7.61□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Gm973E9Q295 1059 aa7.61□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Eif2s2Q99L45 331 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms