RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Rapgef2Q8CHG7 1496 aa30.28■■■□□ 2.44
Vti1b-201ENSMUST00000055262 Zcchc11B2RX14 1644 aaKnown RBP30.24■■■□□ 2.43
Vti1b-201ENSMUST00000055262 AknaQ80VW7 1404 aa30.23■■■□□ 2.43
Vti1b-201ENSMUST00000055262 TchhA0A0B4J1F9 1599 aa30.22■■■□□ 2.43
Vti1b-201ENSMUST00000055262 EprsQ8CGC7 1512 aaKnown RBP30.21■■■□□ 2.43
Vti1b-201ENSMUST00000055262 Abca16E9PWJ7 1678 aa30.19■■■□□ 2.42
Vti1b-201ENSMUST00000055262 Arhgap35Q91YM2 1499 aa30.19■■■□□ 2.42
Vti1b-201ENSMUST00000055262 WizO88286 1684 aaKnown RBP30.18■■■□□ 2.42
Vti1b-201ENSMUST00000055262 Carmil1Q6EDY6 1374 aa30.16■■■□□ 2.42
Vti1b-201ENSMUST00000055262 Adamts12Q811B3 1600 aa30.15■■■□□ 2.42
Vti1b-201ENSMUST00000055262 Map3k1P53349 1493 aa30.15■■■□□ 2.42
Vti1b-201ENSMUST00000055262 PxdnQ3UQ28 1475 aa30.15■■■□□ 2.42
Vti1b-201ENSMUST00000055262 Abcc1O35379 1528 aa30.13■■■□□ 2.41
Vti1b-201ENSMUST00000055262 Abcc2Q8VI47 1543 aa30.13■■■□□ 2.41
Vti1b-201ENSMUST00000055262 Gapvd1Q6PAR5 1458 aa30.11■■■□□ 2.41
Vti1b-201ENSMUST00000055262 Arhgap27A2AB59 869 aa30.11■■■□□ 2.41
Vti1b-201ENSMUST00000055262 Dnmt1P13864 1620 aaKnown RBP30.11■■■□□ 2.41
Vti1b-201ENSMUST00000055262 Cep170Q6A065 1588 aa30.08■■■□□ 2.41
Vti1b-201ENSMUST00000055262 CadpsQ80TJ1 1355 aa30.07■■■□□ 2.4
Vti1b-201ENSMUST00000055262 Map3k4O08648 1597 aa30.07■■■□□ 2.4
Vti1b-201ENSMUST00000055262 Eif4g1Q6NZJ6 1600 aaKnown RBP30.06■■■□□ 2.4
Vti1b-201ENSMUST00000055262 Adgrl3Q80TS3 1537 aa30.04■■■□□ 2.4
Vti1b-201ENSMUST00000055262 Cep162Q6ZQ06 1403 aa30.03■■■□□ 2.4
Vti1b-201ENSMUST00000055262 Neo1P97798 1493 aa30.03■■■□□ 2.4
Vti1b-201ENSMUST00000055262 BC005561E9Q5E2 1589 aa30.02■■■□□ 2.4
Vti1b-201ENSMUST00000055262 Rpap1Q80TE0 1409 aa29.98■■■□□ 2.39
Vti1b-201ENSMUST00000055262 Chd1P40201 1711 aa29.96■■■□□ 2.39
Vti1b-201ENSMUST00000055262 Soga1E1U8D0 1418 aa29.96■■■□□ 2.39
Vti1b-201ENSMUST00000055262 Gm7298A0A0N4SVU1 1476 aa29.95■■■□□ 2.38
Vti1b-201ENSMUST00000055262 Polr1aO35134 1717 aaKnown RBP29.95■■■□□ 2.38
Vti1b-201ENSMUST00000055262 Ythdc2B2RR83 1445 aaKnown RBP29.93■■■□□ 2.38
Vti1b-201ENSMUST00000055262 Clip1Q922J3 1391 aa29.93■■■□□ 2.38
Vti1b-201ENSMUST00000055262 Gm156Q58A37 223 aa29.9■■■□□ 2.38
Vti1b-201ENSMUST00000055262 Gm14025A2AP89 1413 aa29.89■■■□□ 2.38
Vti1b-201ENSMUST00000055262 Myt1lP97500 1187 aa29.89■■■□□ 2.38
Vti1b-201ENSMUST00000055262 Slx4Q6P1D7 1565 aa29.89■■■□□ 2.37
Vti1b-201ENSMUST00000055262 PtprtQ99M80 1454 aa29.87■■■□□ 2.37
Vti1b-201ENSMUST00000055262 Abca5Q8K448 1642 aa29.85■■■□□ 2.37
Vti1b-201ENSMUST00000055262 Cux1P53564 1515 aa29.85■■■□□ 2.37
Vti1b-201ENSMUST00000055262 Arhgef5E9Q7D5 1581 aa29.78■■■□□ 2.36
Vti1b-201ENSMUST00000055262 Ttbk1Q6PCN3 1308 aa29.77■■■□□ 2.36
Vti1b-201ENSMUST00000055262 Fyco1Q8VDC1 1437 aa29.75■■■□□ 2.35
Vti1b-201ENSMUST00000055262 Arhgef12Q8R4H2 1543 aaKnown RBP29.74■■■□□ 2.35
Vti1b-201ENSMUST00000055262 Jph4Q80WT0 628 aa29.72■■■□□ 2.35
Vti1b-201ENSMUST00000055262 WrnO09053 1401 aa29.71■■■□□ 2.35
Vti1b-201ENSMUST00000055262 Pprc1Q6NZN1 1644 aa29.62■■■□□ 2.33
Vti1b-201ENSMUST00000055262 Ankrd26Q811D2 1581 aa29.62■■■□□ 2.33
Vti1b-201ENSMUST00000055262 AI481877A2ALV5 1481 aa29.62■■■□□ 2.33
Vti1b-201ENSMUST00000055262 Setbp1Q9Z180 1582 aa29.57■■■□□ 2.32
Vti1b-201ENSMUST00000055262 Fkbp15Q6P9Q6 1216 aaKnown RBP29.57■■■□□ 2.32
Vti1b-201ENSMUST00000055262 Rrbp1Q99PL5 1605 aaKnown RBP29.56■■■□□ 2.32
Vti1b-201ENSMUST00000055262 Ifnlr1Q8CGK5 535 aa29.51■■■□□ 2.31
Vti1b-201ENSMUST00000055262 Kdm5bQ80Y84 1544 aa29.44■■■□□ 2.3
Vti1b-201ENSMUST00000055262 Arhgap31A6X8Z5 1425 aa29.44■■■□□ 2.3
Vti1b-201ENSMUST00000055262 Setd5Q5XJV7 1441 aa29.43■■■□□ 2.3
Vti1b-201ENSMUST00000055262 Ak9G3UYQ4 1894 aa29.43■■■□□ 2.3
Vti1b-201ENSMUST00000055262 Ccdc141E9Q8Q6 1531 aa29.41■■■□□ 2.3
Vti1b-201ENSMUST00000055262 Pcdh10E9PXQ7 1057 aa29.41■■■□□ 2.3
Vti1b-201ENSMUST00000055262 Erich3F6QRE9 1637 aa29.39■■■□□ 2.3
Vti1b-201ENSMUST00000055262 Aebp1Q640N1 1128 aa29.39■■■□□ 2.3
Vti1b-201ENSMUST00000055262 Ppp1r18Q8BQ30 594 aa29.36■■■□□ 2.29
Vti1b-201ENSMUST00000055262 Igf1rQ60751 1373 aa29.36■■■□□ 2.29
Vti1b-201ENSMUST00000055262 Eea1Q8BL66 1411 aa29.36■■■□□ 2.29
Vti1b-201ENSMUST00000055262 BlmO88700 1416 aa29.34■■■□□ 2.29
Vti1b-201ENSMUST00000055262 Lrrc9Q8CDN9 1456 aa29.32■■■□□ 2.28
Vti1b-201ENSMUST00000055262 Lmo7E9PYF4 1699 aaKnown RBP29.31■■■□□ 2.28
Vti1b-201ENSMUST00000055262 Kif27Q7M6Z4 1394 aa29.31■■■□□ 2.28
Vti1b-201ENSMUST00000055262 Ap3b1Q9Z1T1 1105 aa29.3■■■□□ 2.28
Vti1b-201ENSMUST00000055262 Rapgef6Q5NCJ1 1609 aa29.3■■■□□ 2.28
Vti1b-201ENSMUST00000055262 Pcf11G3X9Z4 1553 aa29.29■■■□□ 2.28
Vti1b-201ENSMUST00000055262 NhsB1AV60 1647 aa29.28■■■□□ 2.28
Vti1b-201ENSMUST00000055262 Znf608Q56A10 1511 aa29.27■■■□□ 2.28
Vti1b-201ENSMUST00000055262 Arid3cA6PWV5 409 aa29.27■■■□□ 2.28
Vti1b-201ENSMUST00000055262 Ncoa2Q61026 1462 aa29.27■■■□□ 2.28
Vti1b-201ENSMUST00000055262 Wdr7Q920I9 1489 aa29.27■■■□□ 2.28
Vti1b-201ENSMUST00000055262 Cul7Q8VE73 1689 aa29.26■■■□□ 2.27
Vti1b-201ENSMUST00000055262 Mroh2aD3Z750 1679 aa29.25■■■□□ 2.27
Vti1b-201ENSMUST00000055262 Clasp1Q80TV8 1535 aaKnown RBP29.23■■■□□ 2.27
Vti1b-201ENSMUST00000055262 Gcc2Q8CHG3 1679 aa29.17■■■□□ 2.26
Vti1b-201ENSMUST00000055262 Atp10dQ8K2X1 1416 aa29.17■■■□□ 2.26
Vti1b-201ENSMUST00000055262 Arap1Q4LDD4 1452 aa29.17■■■□□ 2.26
Vti1b-201ENSMUST00000055262 Ttc37F8VPK0 1563 aa29.15■■■□□ 2.26
Vti1b-201ENSMUST00000055262 Fancd2Q80V62 1450 aa29.15■■■□□ 2.26
Vti1b-201ENSMUST00000055262 Arhgef11Q68FM7 1552 aa29.12■■■□□ 2.25
Vti1b-201ENSMUST00000055262 Magi1Q6RHR9 1471 aa29.12■■■□□ 2.25
Vti1b-201ENSMUST00000055262 Kiaa1210E9Q0C6 1637 aa29.1■■■□□ 2.25
Vti1b-201ENSMUST00000055262 Depdc5P61460 1591 aa29.1■■■□□ 2.25
Vti1b-201ENSMUST00000055262 Mapkbp1Q6NS57 1503 aa29.07■■■□□ 2.24
Vti1b-201ENSMUST00000055262 AdgbG3UZ78 1657 aa29.05■■■□□ 2.24
Vti1b-201ENSMUST00000055262 CntlnA2AM05 1397 aa29.05■■■□□ 2.24
Vti1b-201ENSMUST00000055262 Prex2Q3LAC4 1598 aa29.02■■■□□ 2.24
Vti1b-201ENSMUST00000055262 Ncoa3O09000 1398 aa29.02■■■□□ 2.24
Vti1b-201ENSMUST00000055262 Abca8bQ8K440 1620 aa29.01■■■□□ 2.24
Vti1b-201ENSMUST00000055262 Zfyve16Q80U44 1528 aa29.01■■■□□ 2.23
Vti1b-201ENSMUST00000055262 Mug1P28665 1476 aa28.98■■■□□ 2.23
Vti1b-201ENSMUST00000055262 Dhx57Q6P5D3 1388 aaKnown RBP28.96■■■□□ 2.23
Vti1b-201ENSMUST00000055262 Peg3Q3URU2 1571 aa28.94■■■□□ 2.22
Vti1b-201ENSMUST00000055262 Lmod2Q3UHZ5 550 aa28.92■■■□□ 2.22
Vti1b-201ENSMUST00000055262 Fam163aQ8CAA5 168 aa28.92■■■□□ 2.22
Vti1b-201ENSMUST00000055262 Gm1043A0A140LJC2 1431 aa28.91■■■□□ 2.22
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms