RNA–Protein interactions for RNA: ENSMUST00000039007.6

Trp53rka-201, Transcript of MCG14616, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trp53rka, Length 1,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rka-201ENSMUST00000039007 Cep162Q6ZQ06 1403 aa32.77■■■□□ 2.84
Trp53rka-201ENSMUST00000039007 Pabpn1Q8CCS6 302 aaKnown RBP32.76■■■□□ 2.83
Trp53rka-201ENSMUST00000039007 Carmil1Q6EDY6 1374 aa32.73■■■□□ 2.83
Trp53rka-201ENSMUST00000039007 Fgd6Q69ZL1 1399 aa32.69■■■□□ 2.82
Trp53rka-201ENSMUST00000039007 EprsQ8CGC7 1512 aaKnown RBP32.68■■■□□ 2.82
Trp53rka-201ENSMUST00000039007 Adamts12Q811B3 1600 aa32.65■■■□□ 2.82
Trp53rka-201ENSMUST00000039007 TchhA0A0B4J1F9 1599 aa32.63■■■□□ 2.81
Trp53rka-201ENSMUST00000039007 WizO88286 1684 aaKnown RBP32.62■■■□□ 2.81
Trp53rka-201ENSMUST00000039007 Pelp1Q9DBD5 1123 aaKnown RBP32.61■■■□□ 2.81
Trp53rka-201ENSMUST00000039007 Abca16E9PWJ7 1678 aa32.61■■■□□ 2.81
Trp53rka-201ENSMUST00000039007 Clip1Q922J3 1391 aa32.57■■■□□ 2.8
Trp53rka-201ENSMUST00000039007 Polr1aO35134 1717 aaKnown RBP32.55■■■□□ 2.8
Trp53rka-201ENSMUST00000039007 PxdnQ3UQ28 1475 aa32.53■■■□□ 2.8
Trp53rka-201ENSMUST00000039007 Myt1lP97500 1187 aa32.51■■■□□ 2.79
Trp53rka-201ENSMUST00000039007 Abcc2Q8VI47 1543 aa32.5■■■□□ 2.79
Trp53rka-201ENSMUST00000039007 Dnajc5P60904 198 aa32.49■■■□□ 2.79
Trp53rka-201ENSMUST00000039007 AknaQ80VW7 1404 aa32.48■■■□□ 2.79
Trp53rka-201ENSMUST00000039007 Dnmt1P13864 1620 aaKnown RBP32.47■■■□□ 2.79
Trp53rka-201ENSMUST00000039007 Arhgap27A2AB59 869 aa32.46■■■□□ 2.79
Trp53rka-201ENSMUST00000039007 CadpsQ80TJ1 1355 aa32.44■■■□□ 2.78
Trp53rka-201ENSMUST00000039007 Col17a1Q07563 1470 aa32.43■■■□□ 2.78
Trp53rka-201ENSMUST00000039007 Map3k4O08648 1597 aa32.42■■■□□ 2.78
Trp53rka-201ENSMUST00000039007 Gm7298A0A0N4SVU1 1476 aa32.41■■■□□ 2.78
Trp53rka-201ENSMUST00000039007 Rpap1Q80TE0 1409 aa32.41■■■□□ 2.78
Trp53rka-201ENSMUST00000039007 Abcc1O35379 1528 aa32.38■■■□□ 2.77
Trp53rka-201ENSMUST00000039007 Cux1P53564 1515 aa32.37■■■□□ 2.77
Trp53rka-201ENSMUST00000039007 Soga1E1U8D0 1418 aa32.34■■■□□ 2.77
Trp53rka-201ENSMUST00000039007 BC005561E9Q5E2 1589 aa32.34■■■□□ 2.77
Trp53rka-201ENSMUST00000039007 Abca5Q8K448 1642 aa32.33■■■□□ 2.77
Trp53rka-201ENSMUST00000039007 Zcchc11B2RX14 1644 aaKnown RBP32.32■■■□□ 2.76
Trp53rka-201ENSMUST00000039007 Fyco1Q8VDC1 1437 aa32.31■■■□□ 2.76
Trp53rka-201ENSMUST00000039007 Neo1P97798 1493 aa32.31■■■□□ 2.76
Trp53rka-201ENSMUST00000039007 Chd1P40201 1711 aa32.28■■■□□ 2.76
Trp53rka-201ENSMUST00000039007 Slx4Q6P1D7 1565 aa32.27■■■□□ 2.76
Trp53rka-201ENSMUST00000039007 Gapvd1Q6PAR5 1458 aa32.25■■■□□ 2.75
Trp53rka-201ENSMUST00000039007 Ankrd26Q811D2 1581 aa32.2■■■□□ 2.75
Trp53rka-201ENSMUST00000039007 Cep170Q6A065 1588 aa32.2■■■□□ 2.74
Trp53rka-201ENSMUST00000039007 Acin1Q9JIX8 1338 aaKnown RBP32.18■■■□□ 2.74
Trp53rka-201ENSMUST00000039007 Gm14025A2AP89 1413 aa32.18■■■□□ 2.74
Trp53rka-201ENSMUST00000039007 Ythdc2B2RR83 1445 aaKnown RBP32.14■■■□□ 2.74
Trp53rka-201ENSMUST00000039007 WrnO09053 1401 aa32.12■■■□□ 2.73
Trp53rka-201ENSMUST00000039007 Arhgef12Q8R4H2 1543 aaKnown RBP32.08■■■□□ 2.73
Trp53rka-201ENSMUST00000039007 Adgrl3Q80TS3 1537 aa32.07■■■□□ 2.72
Trp53rka-201ENSMUST00000039007 Jph4Q80WT0 628 aa32.07■■■□□ 2.72
Trp53rka-201ENSMUST00000039007 Setd5Q5XJV7 1441 aa32.06■■■□□ 2.72
Trp53rka-201ENSMUST00000039007 Erich3F6QRE9 1637 aa32.06■■■□□ 2.72
Trp53rka-201ENSMUST00000039007 Eea1Q8BL66 1411 aa32.04■■■□□ 2.72
Trp53rka-201ENSMUST00000039007 PtprtQ99M80 1454 aa32.03■■■□□ 2.72
Trp53rka-201ENSMUST00000039007 Gm156Q58A37 223 aa32.01■■■□□ 2.72
Trp53rka-201ENSMUST00000039007 Rrbp1Q99PL5 1605 aaKnown RBP31.96■■■□□ 2.71
Trp53rka-201ENSMUST00000039007 Aebp1Q640N1 1128 aa31.94■■■□□ 2.7
Trp53rka-201ENSMUST00000039007 Lmo7E9PYF4 1699 aaKnown RBP31.94■■■□□ 2.7
Trp53rka-201ENSMUST00000039007 Pcf11G3X9Z4 1553 aa31.86■■■□□ 2.69
Trp53rka-201ENSMUST00000039007 BlmO88700 1416 aa31.84■■■□□ 2.69
Trp53rka-201ENSMUST00000039007 Arhgap31A6X8Z5 1425 aa31.83■■■□□ 2.69
Trp53rka-201ENSMUST00000039007 AI481877A2ALV5 1481 aa31.82■■■□□ 2.68
Trp53rka-201ENSMUST00000039007 Arap1Q4LDD4 1452 aa31.81■■■□□ 2.68
Trp53rka-201ENSMUST00000039007 Ap3b1Q9Z1T1 1105 aa31.8■■■□□ 2.68
Trp53rka-201ENSMUST00000039007 Fkbp15Q6P9Q6 1216 aaKnown RBP31.8■■■□□ 2.68
Trp53rka-201ENSMUST00000039007 Kif27Q7M6Z4 1394 aa31.79■■■□□ 2.68
Trp53rka-201ENSMUST00000039007 Ccdc141E9Q8Q6 1531 aa31.79■■■□□ 2.68
Trp53rka-201ENSMUST00000039007 Kdm5bQ80Y84 1544 aa31.77■■■□□ 2.68
Trp53rka-201ENSMUST00000039007 Rapgef6Q5NCJ1 1609 aa31.76■■■□□ 2.68
Trp53rka-201ENSMUST00000039007 Arhgef5E9Q7D5 1581 aa31.75■■■□□ 2.67
Trp53rka-201ENSMUST00000039007 Setbp1Q9Z180 1582 aa31.72■■■□□ 2.67
Trp53rka-201ENSMUST00000039007 Igf1rQ60751 1373 aa31.7■■■□□ 2.66
Trp53rka-201ENSMUST00000039007 Pprc1Q6NZN1 1644 aa31.69■■■□□ 2.66
Trp53rka-201ENSMUST00000039007 Ncoa2Q61026 1462 aa31.68■■■□□ 2.66
Trp53rka-201ENSMUST00000039007 CntlnA2AM05 1397 aa31.68■■■□□ 2.66
Trp53rka-201ENSMUST00000039007 Ttbk1Q6PCN3 1308 aa31.67■■■□□ 2.66
Trp53rka-201ENSMUST00000039007 Ehmt2Q9Z148 1263 aaKnown RBP31.65■■■□□ 2.66
Trp53rka-201ENSMUST00000039007 Mroh2aD3Z750 1679 aa31.64■■■□□ 2.66
Trp53rka-201ENSMUST00000039007 Ak9G3UYQ4 1894 aa31.63■■■□□ 2.65
Trp53rka-201ENSMUST00000039007 Cul7Q8VE73 1689 aa31.61■■■□□ 2.65
Trp53rka-201ENSMUST00000039007 NhsB1AV60 1647 aa31.61■■■□□ 2.65
Trp53rka-201ENSMUST00000039007 Ifnlr1Q8CGK5 535 aa31.61■■■□□ 2.65
Trp53rka-201ENSMUST00000039007 Arhgef11Q68FM7 1552 aa31.56■■■□□ 2.64
Trp53rka-201ENSMUST00000039007 Gcc2Q8CHG3 1679 aa31.56■■■□□ 2.64
Trp53rka-201ENSMUST00000039007 Lrrc9Q8CDN9 1456 aa31.55■■■□□ 2.64
Trp53rka-201ENSMUST00000039007 Peg3Q3URU2 1571 aa31.54■■■□□ 2.64
Trp53rka-201ENSMUST00000039007 Magi1Q6RHR9 1471 aa31.54■■■□□ 2.64
Trp53rka-201ENSMUST00000039007 Tiam1Q60610 1591 aa31.51■■■□□ 2.64
Trp53rka-201ENSMUST00000039007 Fancd2Q80V62 1450 aa31.51■■■□□ 2.64
Trp53rka-201ENSMUST00000039007 Wdr7Q920I9 1489 aa31.51■■■□□ 2.64
Trp53rka-201ENSMUST00000039007 Naip1Q9QWK5 1403 aa31.51■■■□□ 2.63
Trp53rka-201ENSMUST00000039007 Kiaa1210E9Q0C6 1637 aa31.48■■■□□ 2.63
Trp53rka-201ENSMUST00000039007 Znf608Q56A10 1511 aa31.47■■■□□ 2.63
Trp53rka-201ENSMUST00000039007 Ncoa3O09000 1398 aa31.46■■■□□ 2.63
Trp53rka-201ENSMUST00000039007 Gm1043A0A140LJC2 1431 aa31.46■■■□□ 2.63
Trp53rka-201ENSMUST00000039007 Mug1P28665 1476 aa31.45■■■□□ 2.62
Trp53rka-201ENSMUST00000039007 Atp10dQ8K2X1 1416 aa31.44■■■□□ 2.62
Trp53rka-201ENSMUST00000039007 Fam163aQ8CAA5 168 aa31.42■■■□□ 2.62
Trp53rka-201ENSMUST00000039007 Dhx57Q6P5D3 1388 aaKnown RBP31.41■■■□□ 2.62
Trp53rka-201ENSMUST00000039007 Arid3cA6PWV5 409 aa31.41■■■□□ 2.62
Trp53rka-201ENSMUST00000039007 Lmod2Q3UHZ5 550 aa31.41■■■□□ 2.62
Trp53rka-201ENSMUST00000039007 Ppp1r18Q8BQ30 594 aa31.4■■■□□ 2.62
Trp53rka-201ENSMUST00000039007 Prex2Q3LAC4 1598 aa31.39■■■□□ 2.62
Trp53rka-201ENSMUST00000039007 Clasp1Q80TV8 1535 aaKnown RBP31.38■■■□□ 2.61
Trp53rka-201ENSMUST00000039007 Kiaa1551Q5DTW7 1521 aa31.35■■■□□ 2.61
Trp53rka-201ENSMUST00000039007 Cdc42bpaQ3UU96 1719 aa31.35■■■□□ 2.61
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms