RNA–Protein interactions for RNA: ENSMUST00000036300.12

Col27a1-201, Transcript of Collagen alpha-1(XXVII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col27a1, Length 7,612 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1-201ENSMUST00000036300 MyclP10166 368 aa22.37■■□□□ 1.17
Col27a1-201ENSMUST00000036300 Arid4bA2CG63 1314 aaKnown RBP22.3■■□□□ 1.16
Col27a1-201ENSMUST00000036300 NgefQ8CHT1 710 aa22.29■■□□□ 1.16
Col27a1-201ENSMUST00000036300 Calr4Q3TQS0 420 aa22.25■■□□□ 1.15
Col27a1-201ENSMUST00000036300 Kdm2aP59997 1161 aa22.19■■□□□ 1.14
Col27a1-201ENSMUST00000036300 Mrs2Q5NCE8 434 aa22.16■■□□□ 1.14
Col27a1-201ENSMUST00000036300 Clstn2Q9ER65 966 aa22.16■■□□□ 1.14
Col27a1-201ENSMUST00000036300 Trim44Q9QXA7 346 aa22.14■■□□□ 1.14
Col27a1-201ENSMUST00000036300 Rgl3Q3UYI5 709 aa22.11■■□□□ 1.13
Col27a1-201ENSMUST00000036300 IqubQ8CDK3 788 aa22.11■■□□□ 1.13
Col27a1-201ENSMUST00000036300 Exosc9Q9JHI7 438 aaKnown RBP22.1■■□□□ 1.13
Col27a1-201ENSMUST00000036300 Ccer2J3QPU5 274 aa22.1■■□□□ 1.13
Col27a1-201ENSMUST00000036300 Trim30dE9PWL0 497 aa22.09■■□□□ 1.13
Col27a1-201ENSMUST00000036300 BlmO88700 1416 aa22.09■■□□□ 1.13
Col27a1-201ENSMUST00000036300 Hsp90ab1P11499 724 aaKnown RBP22.09■■□□□ 1.13
Col27a1-201ENSMUST00000036300 Aplp2Q06335 707 aa22.07■■□□□ 1.12
Col27a1-201ENSMUST00000036300 PnnO35691 725 aaKnown RBP22.06■■□□□ 1.12
Col27a1-201ENSMUST00000036300 PtmaP26350 111 aa22.05■■□□□ 1.12
Col27a1-201ENSMUST00000036300 Apbb1Q9QXJ1 710 aa22.02■■□□□ 1.12
Col27a1-201ENSMUST00000036300 1700019A02RikA0A087WPV9 146 aa22.02■■□□□ 1.12
Col27a1-201ENSMUST00000036300 Sall2Q9QX96 1004 aa22■■□□□ 1.11
Col27a1-201ENSMUST00000036300 Wdr43Q6ZQL4 677 aaKnown RBP21.99■■□□□ 1.11
Col27a1-201ENSMUST00000036300 Grwd1Q810D6 446 aaKnown RBP21.99■■□□□ 1.11
Col27a1-201ENSMUST00000036300 Pes1Q9EQ61 584 aaKnown RBP21.96■■□□□ 1.11
Col27a1-201ENSMUST00000036300 Ggt6Q6PDE7 497 aa21.96■■□□□ 1.11
Col27a1-201ENSMUST00000036300 Srpk2O54781 681 aaKnown RBP21.96■■□□□ 1.11
Col27a1-201ENSMUST00000036300 Neurod2Q62414 383 aa21.94■■□□□ 1.1
Col27a1-201ENSMUST00000036300 Q8BT18 775 aa21.93■■□□□ 1.1
Col27a1-201ENSMUST00000036300 Gm6268A2A3U9 297 aa21.92■■□□□ 1.1
Col27a1-201ENSMUST00000036300 Gm20521D3Z5F7 333 aa21.92■■□□□ 1.1
Col27a1-201ENSMUST00000036300 CanxP35564 591 aaKnown RBP21.92■■□□□ 1.1
Col27a1-201ENSMUST00000036300 Brd4Q9ESU6 1400 aaKnown RBP21.9■■□□□ 1.1
Col27a1-201ENSMUST00000036300 Mroh3A0A1D5RM54 893 aa21.9■■□□□ 1.1
Col27a1-201ENSMUST00000036300 Plcb2A3KGF7 1181 aa21.88■■□□□ 1.09
Col27a1-201ENSMUST00000036300 Stk24Q99KH8 431 aa21.87■■□□□ 1.09
Col27a1-201ENSMUST00000036300 Arhgap27A2AB59 869 aa21.86■■□□□ 1.09
Col27a1-201ENSMUST00000036300 Mapk8ip3Q9ESN9 1337 aa21.84■■□□□ 1.09
Col27a1-201ENSMUST00000036300 Stag3O70576 1240 aa21.83■■□□□ 1.09
Col27a1-201ENSMUST00000036300 Armcx1Q9CX83 456 aa21.83■■□□□ 1.08
Col27a1-201ENSMUST00000036300 Ecm2Q5FW85 670 aa21.82■■□□□ 1.08
Col27a1-201ENSMUST00000036300 Sh3bp5Q9Z131 463 aa21.81■■□□□ 1.08
Col27a1-201ENSMUST00000036300 Anks4bQ8K3X6 423 aa21.76■■□□□ 1.07
Col27a1-201ENSMUST00000036300 Ofd1Q80Z25 1017 aa21.76■■□□□ 1.07
Col27a1-201ENSMUST00000036300 Cnga1P29974 684 aa21.75■■□□□ 1.07
Col27a1-201ENSMUST00000036300 Plin1Q8CGN5 517 aa21.75■■□□□ 1.07
Col27a1-201ENSMUST00000036300 Rrp7aQ9D1C9 280 aaKnown RBP21.74■■□□□ 1.07
Col27a1-201ENSMUST00000036300 Iqcf3Q9D498 203 aa21.72■■□□□ 1.07
Col27a1-201ENSMUST00000036300 Dbr1Q923B1 550 aa21.71■■□□□ 1.07
Col27a1-201ENSMUST00000036300 Ppp1r18Q8BQ30 594 aa21.71■■□□□ 1.07
Col27a1-201ENSMUST00000036300 Card11Q8CIS0 1159 aa21.69■■□□□ 1.06
Col27a1-201ENSMUST00000036300 Hsp90b1P08113 802 aaKnown RBP21.68■■□□□ 1.06
Col27a1-201ENSMUST00000036300 Spryd3E9Q9B3 442 aa21.67■■□□□ 1.06
Col27a1-201ENSMUST00000036300 Anapc15P60007 132 aa21.67■■□□□ 1.06
Col27a1-201ENSMUST00000036300 Casc1Q6TDU8 730 aa21.66■■□□□ 1.06
Col27a1-201ENSMUST00000036300 Ubap1lG3UW59 384 aa21.65■■□□□ 1.06
Col27a1-201ENSMUST00000036300 Rassf8Q8CJ96 419 aa21.65■■□□□ 1.06
Col27a1-201ENSMUST00000036300 Setd5Q5XJV7 1441 aa21.64■■□□□ 1.06
Col27a1-201ENSMUST00000036300 Eif4g2Q62448 906 aaKnown RBP21.59■■□□□ 1.05
Col27a1-201ENSMUST00000036300 Znf316Q6PGE4 1016 aa21.58■■□□□ 1.04
Col27a1-201ENSMUST00000036300 U2surpQ6NV83 1029 aaKnown RBP21.57■■□□□ 1.04
Col27a1-201ENSMUST00000036300 Pcmtd1P59913 357 aa21.55■■□□□ 1.04
Col27a1-201ENSMUST00000036300 Ppm1fQ8CGA0 452 aa21.55■■□□□ 1.04
Col27a1-201ENSMUST00000036300 Htatsf1Q8BGC0 757 aa21.55■■□□□ 1.04
Col27a1-201ENSMUST00000036300 MlecQ6ZQI3 291 aaKnown RBP21.54■■□□□ 1.04
Col27a1-201ENSMUST00000036300 Map7O88735 730 aa21.54■■□□□ 1.04
Col27a1-201ENSMUST00000036300 Rtf1A2AQ19 715 aaKnown RBP21.53■■□□□ 1.04
Col27a1-201ENSMUST00000036300 Isy1Q69ZQ2 285 aaKnown RBP21.53■■□□□ 1.04
Col27a1-201ENSMUST00000036300 Stk26Q99JT2 416 aa21.52■■□□□ 1.04
Col27a1-201ENSMUST00000036300 Wwc2Q6NXJ0 1187 aa21.52■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Prm3Q62100 101 aa21.51■■□□□ 1.03
Col27a1-201ENSMUST00000036300 B4galnt3Q6L8S8 986 aa21.51■■□□□ 1.03
Col27a1-201ENSMUST00000036300 NudcO35685 332 aaKnown RBP21.5■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Rb1cc1Q9ESK9 1588 aa21.5■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Nol10Q5RJG1 687 aaKnown RBP21.5■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Slc4a1apE9PX68 744 aa21.49■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Tnnt1O88346 262 aa21.49■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Chmp4bQ9D8B3 224 aaKnown RBP21.49■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Noc3lQ8VI84 807 aaKnown RBP21.49■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Sox12Q04890 314 aa21.48■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Cep164Q5DU05 1446 aa21.48■■□□□ 1.03
Col27a1-201ENSMUST00000036300 MccE9PWI3 1003 aa21.46■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Zfp777B9EKF4 885 aa21.45■■□□□ 1.02
Col27a1-201ENSMUST00000036300 Senp3Q9EP97 568 aaKnown RBP21.45■■□□□ 1.02
Col27a1-201ENSMUST00000036300 Kif15Q6P9L6 1387 aa21.43■■□□□ 1.02
Col27a1-201ENSMUST00000036300 Adam1bQ8R534 806 aa21.42■■□□□ 1.02
Col27a1-201ENSMUST00000036300 Mtus2Q3UHD3 1353 aa21.39■■□□□ 1.02
Col27a1-201ENSMUST00000036300 Psme1P97371 249 aa21.38■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Mical1Q8VDP3 1048 aa21.38■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Vps53Q8CCB4 832 aa21.37■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Dnai2A2AC93 623 aa21.36■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Mak16Q8BGS0 296 aaKnown RBP21.36■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Cwc22Q8C5N3 908 aaKnown RBP21.36■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Erich6bQ9D4S6 220 aa21.36■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Fam71e1A1L3C1 212 aa21.35■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Ccdc9Q8VC31 543 aaKnown RBP21.35■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Arid3cA6PWV5 409 aa21.35■■□□□ 1.01
Col27a1-201ENSMUST00000036300 KnstrnQ9D9Z1 312 aaKnown RBP21.34■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Ppm1gQ61074 542 aa21.33■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Q3TQI7 289 aaKnown RBP21.33■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Iffo2Q8R2V2 512 aa21.33■■□□□ 1.01
Retrieved 100 of 22,080 RNA–protein pairs in 90.4 ms