RNA–Protein interactions for RNA: ENSMUST00000035565.4

Pkd1-201, Transcript of Polycystin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pkd1, Length 14,164 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1-201ENSMUST00000035565 Eid3Q3V124 375 aa11.71□□□□□ -0.53
Pkd1-201ENSMUST00000035565 Fgd1P52734 960 aa11.7□□□□□ -0.54
Pkd1-201ENSMUST00000035565 Hdac5Q9Z2V6 1113 aa11.68□□□□□ -0.54
Pkd1-201ENSMUST00000035565 Trim26Q99PN3 545 aa11.68□□□□□ -0.54
Pkd1-201ENSMUST00000035565 Znf326O88291 580 aa11.67□□□□□ -0.54
Pkd1-201ENSMUST00000035565 1700123L14RikQ3V2K7 440 aa11.65□□□□□ -0.54
Pkd1-201ENSMUST00000035565 Irx3P81067 507 aa11.65□□□□□ -0.55
Pkd1-201ENSMUST00000035565 Ifnlr1Q8CGK5 535 aa11.64□□□□□ -0.55
Pkd1-201ENSMUST00000035565 PnnO35691 725 aaKnown RBP11.63□□□□□ -0.55
Pkd1-201ENSMUST00000035565 Spryd3E9Q9B3 442 aa11.61□□□□□ -0.55
Pkd1-201ENSMUST00000035565 Mak16Q8BGS0 296 aaKnown RBP11.61□□□□□ -0.55
Pkd1-201ENSMUST00000035565 Zcchc6Q5BLK4 1491 aaKnown RBP11.59□□□□□ -0.55
Pkd1-201ENSMUST00000035565 Mrs2Q5NCE8 434 aa11.59□□□□□ -0.55
Pkd1-201ENSMUST00000035565 AU015836B2RUM3 263 aa11.58□□□□□ -0.56
Pkd1-201ENSMUST00000035565 Podxl2Q8CAE9 603 aa11.57□□□□□ -0.56
Pkd1-201ENSMUST00000035565 Taok2Q6ZQ29 1240 aa11.57□□□□□ -0.56
Pkd1-201ENSMUST00000035565 Erich6bQ9D4S6 220 aa11.56□□□□□ -0.56
Pkd1-201ENSMUST00000035565 Calcoco2A2A6M5 331 aa11.55□□□□□ -0.56
Pkd1-201ENSMUST00000035565 SetQ9EQU5 289 aaKnown RBP11.55□□□□□ -0.56
Pkd1-201ENSMUST00000035565 Casc1Q6TDU8 730 aa11.54□□□□□ -0.56
Pkd1-201ENSMUST00000035565 Dnttip2Q8R2M2 758 aaKnown RBP11.53□□□□□ -0.56
Pkd1-201ENSMUST00000035565 Ppm1gQ61074 542 aa11.52□□□□□ -0.57
Pkd1-201ENSMUST00000035565 P3h3Q8CG70 732 aa11.52□□□□□ -0.57
Pkd1-201ENSMUST00000035565 MsnP26041 577 aaKnown RBP11.51□□□□□ -0.57
Pkd1-201ENSMUST00000035565 Clstn1Q9EPL2 979 aa11.5□□□□□ -0.57
Pkd1-201ENSMUST00000035565 Irx6Q9ER75 438 aa11.49□□□□□ -0.57
Pkd1-201ENSMUST00000035565 Ccer2J3QPU5 274 aa11.48□□□□□ -0.57
Pkd1-201ENSMUST00000035565 BccipQ9CWI3 316 aa11.48□□□□□ -0.57
Pkd1-201ENSMUST00000035565 Apbb1Q9QXJ1 710 aa11.47□□□□□ -0.57
Pkd1-201ENSMUST00000035565 Ofd1Q80Z25 1017 aa11.46□□□□□ -0.57
Pkd1-201ENSMUST00000035565 Dbr1Q923B1 550 aa11.46□□□□□ -0.58
Pkd1-201ENSMUST00000035565 Pes1Q9EQ61 584 aaKnown RBP11.44□□□□□ -0.58
Pkd1-201ENSMUST00000035565 Npm1Q61937 292 aaKnown RBP11.44□□□□□ -0.58
Pkd1-201ENSMUST00000035565 Plppr3Q7TPB0 716 aa11.44□□□□□ -0.58
Pkd1-201ENSMUST00000035565 Map7d2A2AG50 781 aa11.43□□□□□ -0.58
Pkd1-201ENSMUST00000035565 Clip1Q922J3 1391 aa11.42□□□□□ -0.58
Pkd1-201ENSMUST00000035565 B4galnt3Q6L8S8 986 aa11.41□□□□□ -0.58
Pkd1-201ENSMUST00000035565 Rrp12Q6P5B0 1295 aaKnown RBP11.41□□□□□ -0.58
Pkd1-201ENSMUST00000035565 Map7O88735 730 aa11.4□□□□□ -0.58
Pkd1-201ENSMUST00000035565 Armcx1Q9CX83 456 aa11.4□□□□□ -0.59
Pkd1-201ENSMUST00000035565 Pcmtd1P59913 357 aa11.39□□□□□ -0.59
Pkd1-201ENSMUST00000035565 Fkbp15Q6P9Q6 1216 aaKnown RBP11.38□□□□□ -0.59
Pkd1-201ENSMUST00000035565 Kiaa0754Q69ZZ9 979 aa11.37□□□□□ -0.59
Pkd1-201ENSMUST00000035565 Wwc2Q6NXJ0 1187 aa11.37□□□□□ -0.59
Pkd1-201ENSMUST00000035565 Gm973E9Q295 1059 aa11.36□□□□□ -0.59
Pkd1-201ENSMUST00000035565 RdxP26043 583 aaKnown RBP11.36□□□□□ -0.59
Pkd1-201ENSMUST00000035565 Dcaf1Q80TR8 1506 aa11.35□□□□□ -0.59
Pkd1-201ENSMUST00000035565 Sh3bp5Q9Z131 463 aa11.35□□□□□ -0.59
Pkd1-201ENSMUST00000035565 Chic2Q9D9G3 165 aa11.35□□□□□ -0.59
Pkd1-201ENSMUST00000035565 MccE9PWI3 1003 aa11.34□□□□□ -0.59
Pkd1-201ENSMUST00000035565 Ftsj3Q9DBE9 838 aaKnown RBP11.34□□□□□ -0.59
Pkd1-201ENSMUST00000035565 Hsp90b1P08113 802 aaKnown RBP11.34□□□□□ -0.59
Pkd1-201ENSMUST00000035565 Gpatch11Q3UFS4 262 aa11.34□□□□□ -0.59
Pkd1-201ENSMUST00000035565 Rtn4Q99P72 1162 aaKnown RBP11.34□□□□□ -0.59
Pkd1-201ENSMUST00000035565 Pknox2Q8BG99 474 aa11.34□□□□□ -0.59
Pkd1-201ENSMUST00000035565 Cald1E9QA15 768 aaKnown RBP11.33□□□□□ -0.6
Pkd1-201ENSMUST00000035565 Slc4a3P16283 1227 aa11.32□□□□□ -0.6
Pkd1-201ENSMUST00000035565 Neurod2Q62414 383 aa11.32□□□□□ -0.6
Pkd1-201ENSMUST00000035565 Chmp4bQ9D8B3 224 aaKnown RBP11.32□□□□□ -0.6
Pkd1-201ENSMUST00000035565 KnstrnQ9D9Z1 312 aaKnown RBP11.31□□□□□ -0.6
Pkd1-201ENSMUST00000035565 Rassf8Q8CJ96 419 aa11.31□□□□□ -0.6
Pkd1-201ENSMUST00000035565 Gtf3c3Q3TMP1 882 aa11.3□□□□□ -0.6
Pkd1-201ENSMUST00000035565 Rgl3Q3UYI5 709 aa11.3□□□□□ -0.6
Pkd1-201ENSMUST00000035565 Anapc15P60007 132 aa11.3□□□□□ -0.6
Pkd1-201ENSMUST00000035565 Noc3lQ8VI84 807 aaKnown RBP11.29□□□□□ -0.6
Pkd1-201ENSMUST00000035565 PtmsQ9D0J8 101 aaKnown RBP11.29□□□□□ -0.6
Pkd1-201ENSMUST00000035565 Fbxo2Q80UW2 297 aa11.27□□□□□ -0.6
Pkd1-201ENSMUST00000035565 SafbD3YXK2 937 aaKnown RBP11.27□□□□□ -0.6
Pkd1-201ENSMUST00000035565 Gm35339A0A140LHH9 1649 aa11.27□□□□□ -0.61
Pkd1-201ENSMUST00000035565 Trim30aP15533 496 aa11.27□□□□□ -0.61
Pkd1-201ENSMUST00000035565 Gm6268A2A3U9 297 aa11.27□□□□□ -0.61
Pkd1-201ENSMUST00000035565 Becn1O88597 448 aa11.26□□□□□ -0.61
Pkd1-201ENSMUST00000035565 CgnP59242 1191 aa11.25□□□□□ -0.61
Pkd1-201ENSMUST00000035565 Slc4a1apE9PX68 744 aa11.25□□□□□ -0.61
Pkd1-201ENSMUST00000035565 Prm3Q62100 101 aa11.25□□□□□ -0.61
Pkd1-201ENSMUST00000035565 VgfQ0VGU4 617 aa11.24□□□□□ -0.61
Pkd1-201ENSMUST00000035565 Ipo9Q91YE6 1041 aa11.24□□□□□ -0.61
Pkd1-201ENSMUST00000035565 Dnai1Q8C0M8 701 aa11.24□□□□□ -0.61
Pkd1-201ENSMUST00000035565 Mapk8ip3Q9ESN9 1337 aa11.23□□□□□ -0.61
Pkd1-201ENSMUST00000035565 Safb2Q80YR5 991 aaKnown RBP11.23□□□□□ -0.61
Pkd1-201ENSMUST00000035565 Mbd3Q9Z2D8 285 aaKnown RBP11.23□□□□□ -0.61
Pkd1-201ENSMUST00000035565 1700019A02RikA0A087WPV9 146 aa11.23□□□□□ -0.61
Pkd1-201ENSMUST00000035565 Tpm3-rs7D3Z2H9 248 aa11.23□□□□□ -0.61
Pkd1-201ENSMUST00000035565 Aebp2Q9Z248 504 aaKnown RBP11.23□□□□□ -0.61
Pkd1-201ENSMUST00000035565 Ddrgk1Q80WW9 315 aa11.23□□□□□ -0.61
Pkd1-201ENSMUST00000035565 Exosc9Q9JHI7 438 aaKnown RBP11.21□□□□□ -0.61
Pkd1-201ENSMUST00000035565 Clstn2Q9ER65 966 aa11.21□□□□□ -0.62
Pkd1-201ENSMUST00000035565 IqubQ8CDK3 788 aa11.21□□□□□ -0.62
Pkd1-201ENSMUST00000035565 SlkO54988 1233 aa11.2□□□□□ -0.62
Pkd1-201ENSMUST00000035565 NudcO35685 332 aaKnown RBP11.2□□□□□ -0.62
Pkd1-201ENSMUST00000035565 Tcerg1Q8CGF7 1100 aaKnown RBP11.2□□□□□ -0.62
Pkd1-201ENSMUST00000035565 Kdm2aP59997 1161 aa11.19□□□□□ -0.62
Pkd1-201ENSMUST00000035565 Rwdd1Q9CQK7 243 aa11.19□□□□□ -0.62
Pkd1-201ENSMUST00000035565 IbspQ61711 324 aa11.19□□□□□ -0.62
Pkd1-201ENSMUST00000035565 Tpm3P21107 285 aaKnown RBP11.19□□□□□ -0.62
Pkd1-201ENSMUST00000035565 Ush1cQ9ES64 910 aa11.18□□□□□ -0.62
Pkd1-201ENSMUST00000035565 Supt16hQ920B9 1047 aa11.18□□□□□ -0.62
Pkd1-201ENSMUST00000035565 BlmO88700 1416 aa11.17□□□□□ -0.62
Pkd1-201ENSMUST00000035565 Mical1Q8VDP3 1048 aa11.17□□□□□ -0.62
Pkd1-201ENSMUST00000035565 Iqcf3Q9D498 203 aa11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms