RNA–Protein interactions for RNA: ENSMUST00000029421.5

Ptx3-201, Transcript of Pentraxin-related protein PTX3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptx3, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3-201ENSMUST00000029421 Lrriq1Q0P5X1 1673 aa33.53■■■□□ 2.96
Ptx3-201ENSMUST00000029421 Disp1Q3TDN0 1521 aa33.52■■■□□ 2.96
Ptx3-201ENSMUST00000029421 Cux1P53564 1515 aa33.51■■■□□ 2.95
Ptx3-201ENSMUST00000029421 Magi3Q9EQJ9 1476 aa33.5■■■□□ 2.95
Ptx3-201ENSMUST00000029421 Arhgef5E9Q7D5 1581 aa33.5■■■□□ 2.95
Ptx3-201ENSMUST00000029421 Pla2r1Q62028 1487 aa33.49■■■□□ 2.95
Ptx3-201ENSMUST00000029421 Mier1Q5UAK0 511 aa33.46■■■□□ 2.95
Ptx3-201ENSMUST00000029421 Ift140E9PY46 1464 aa33.45■■■□□ 2.94
Ptx3-201ENSMUST00000029421 Polr1aO35134 1717 aaKnown RBP33.43■■■□□ 2.94
Ptx3-201ENSMUST00000029421 Grin2aP35436 1464 aa33.43■■■□□ 2.94
Ptx3-201ENSMUST00000029421 Plekhg3Q4VAC9 1341 aa33.41■■■□□ 2.94
Ptx3-201ENSMUST00000029421 Ap3b1Q9Z1T1 1105 aa33.39■■■□□ 2.94
Ptx3-201ENSMUST00000029421 UbtfP25976 765 aaKnown RBP33.38■■■□□ 2.93
Ptx3-201ENSMUST00000029421 Rpap1Q80TE0 1409 aa33.37■■■□□ 2.93
Ptx3-201ENSMUST00000029421 Fyco1Q8VDC1 1437 aa33.37■■■□□ 2.93
Ptx3-201ENSMUST00000029421 EprsQ8CGC7 1512 aaKnown RBP33.36■■■□□ 2.93
Ptx3-201ENSMUST00000029421 Lmo7E9PYF4 1699 aaKnown RBP33.34■■■□□ 2.93
Ptx3-201ENSMUST00000029421 Pcf11G3X9Z4 1553 aa33.33■■■□□ 2.93
Ptx3-201ENSMUST00000029421 Pbrm1Q8BSQ9 1634 aaKnown RBP33.32■■■□□ 2.93
Ptx3-201ENSMUST00000029421 Setd1bQ8CFT2 1985 aa33.32■■■□□ 2.93
Ptx3-201ENSMUST00000029421 Nup160Q9Z0W3 1402 aaKnown RBP33.29■■■□□ 2.92
Ptx3-201ENSMUST00000029421 Tiam1Q60610 1591 aa33.29■■■□□ 2.92
Ptx3-201ENSMUST00000029421 Gpatch8A2A6A1 1505 aa33.28■■■□□ 2.92
Ptx3-201ENSMUST00000029421 Naip1Q9QWK5 1403 aa33.22■■■□□ 2.91
Ptx3-201ENSMUST00000029421 CadpsQ80TJ1 1355 aa33.19■■■□□ 2.9
Ptx3-201ENSMUST00000029421 Adamts12Q811B3 1600 aa33.18■■■□□ 2.9
Ptx3-201ENSMUST00000029421 CntlnA2AM05 1397 aa33.17■■■□□ 2.9
Ptx3-201ENSMUST00000029421 WizO88286 1684 aaKnown RBP33.15■■■□□ 2.9
Ptx3-201ENSMUST00000029421 Gm7298A0A0N4SVU1 1476 aa33.13■■■□□ 2.89
Ptx3-201ENSMUST00000029421 Abca5Q8K448 1642 aa33.13■■■□□ 2.89
Ptx3-201ENSMUST00000029421 Aebp1Q640N1 1128 aa33.12■■■□□ 2.89
Ptx3-201ENSMUST00000029421 Slx4Q6P1D7 1565 aa33.12■■■□□ 2.89
Ptx3-201ENSMUST00000029421 Cc2d2bA0A286YDU8 1405 aa33.12■■■□□ 2.89
Ptx3-201ENSMUST00000029421 BlmO88700 1416 aa33.07■■■□□ 2.89
Ptx3-201ENSMUST00000029421 TchhA0A0B4J1F9 1599 aa33.05■■■□□ 2.88
Ptx3-201ENSMUST00000029421 Peg3Q3URU2 1571 aa33.05■■■□□ 2.88
Ptx3-201ENSMUST00000029421 Eif4g3Q80XI3 1579 aaKnown RBP33.03■■■□□ 2.88
Ptx3-201ENSMUST00000029421 PxdnQ3UQ28 1475 aa33.03■■■□□ 2.88
Ptx3-201ENSMUST00000029421 Soga1E1U8D0 1418 aa33.02■■■□□ 2.88
Ptx3-201ENSMUST00000029421 Abca16E9PWJ7 1678 aa33.02■■■□□ 2.88
Ptx3-201ENSMUST00000029421 Rusc2Q80U22 1514 aa32.99■■■□□ 2.87
Ptx3-201ENSMUST00000029421 Neurod1Q60867 357 aa32.98■■■□□ 2.87
Ptx3-201ENSMUST00000029421 Ncapd3Q6ZQK0 1506 aa32.97■■■□□ 2.87
Ptx3-201ENSMUST00000029421 Las1lA2BE28 776 aaKnown RBP32.91■■■□□ 2.86
Ptx3-201ENSMUST00000029421 Gm1043A0A140LJC2 1431 aa32.89■■■□□ 2.86
Ptx3-201ENSMUST00000029421 Lmod2Q3UHZ5 550 aa32.88■■■□□ 2.85
Ptx3-201ENSMUST00000029421 Sall2Q9QX96 1004 aa32.86■■■□□ 2.85
Ptx3-201ENSMUST00000029421 Abcc2Q8VI47 1543 aa32.86■■■□□ 2.85
Ptx3-201ENSMUST00000029421 Arhgap27A2AB59 869 aa32.8■■■□□ 2.84
Ptx3-201ENSMUST00000029421 Kif27Q7M6Z4 1394 aa32.78■■■□□ 2.84
Ptx3-201ENSMUST00000029421 WrnO09053 1401 aa32.76■■■□□ 2.83
Ptx3-201ENSMUST00000029421 Shroom2A2ALU4 1481 aa32.72■■■□□ 2.83
Ptx3-201ENSMUST00000029421 Map3k4O08648 1597 aa32.64■■■□□ 2.82
Ptx3-201ENSMUST00000029421 3425401B19RikD3Z1D3 1412 aa32.6■■■□□ 2.81
Ptx3-201ENSMUST00000029421 Anks4bQ8K3X6 423 aa32.6■■■□□ 2.81
Ptx3-201ENSMUST00000029421 Dnmt1P13864 1620 aaKnown RBP32.59■■■□□ 2.81
Ptx3-201ENSMUST00000029421 ClspnQ80YR7 1315 aa32.59■■■□□ 2.81
Ptx3-201ENSMUST00000029421 Lmtk2Q3TYD6 1471 aa32.58■■■□□ 2.81
Ptx3-201ENSMUST00000029421 Rapgef6Q5NCJ1 1609 aa32.56■■■□□ 2.8
Ptx3-201ENSMUST00000029421 BC005561E9Q5E2 1589 aa32.54■■■□□ 2.8
Ptx3-201ENSMUST00000029421 Fgd6Q69ZL1 1399 aa32.52■■■□□ 2.8
Ptx3-201ENSMUST00000029421 Kdm5bQ80Y84 1544 aa32.51■■■□□ 2.79
Ptx3-201ENSMUST00000029421 Ccnb3Q810T2 1396 aa32.49■■■□□ 2.79
Ptx3-201ENSMUST00000029421 NexmifQ5DTT1 1515 aa32.48■■■□□ 2.79
Ptx3-201ENSMUST00000029421 Mug1P28665 1476 aa32.45■■■□□ 2.79
Ptx3-201ENSMUST00000029421 Ncoa3O09000 1398 aa32.45■■■□□ 2.78
Ptx3-201ENSMUST00000029421 Neo1P97798 1493 aa32.45■■■□□ 2.78
Ptx3-201ENSMUST00000029421 Arhgap31A6X8Z5 1425 aa32.43■■■□□ 2.78
Ptx3-201ENSMUST00000029421 Gcc2Q8CHG3 1679 aa32.42■■■□□ 2.78
Ptx3-201ENSMUST00000029421 Wdr66E9Q743 1299 aa32.42■■■□□ 2.78
Ptx3-201ENSMUST00000029421 Arhgef11Q68FM7 1552 aa32.41■■■□□ 2.78
Ptx3-201ENSMUST00000029421 Zcchc11B2RX14 1644 aaKnown RBP32.41■■■□□ 2.78
Ptx3-201ENSMUST00000029421 TonslQ6NZL6 1363 aa32.4■■■□□ 2.78
Ptx3-201ENSMUST00000029421 AknaQ80VW7 1404 aa32.39■■■□□ 2.78
Ptx3-201ENSMUST00000029421 Jph4Q80WT0 628 aa32.36■■■□□ 2.77
Ptx3-201ENSMUST00000029421 Ncoa2Q61026 1462 aa32.35■■■□□ 2.77
Ptx3-201ENSMUST00000029421 Fam50aQ9WV03 339 aaKnown RBP32.33■■■□□ 2.77
Ptx3-201ENSMUST00000029421 Ccdc141E9Q8Q6 1531 aa32.33■■■□□ 2.77
Ptx3-201ENSMUST00000029421 Arhgef12Q8R4H2 1543 aaKnown RBP32.33■■■□□ 2.77
Ptx3-201ENSMUST00000029421 A2mQ6GQT1 1474 aa32.32■■■□□ 2.76
Ptx3-201ENSMUST00000029421 Aebp2Q9Z248 504 aaKnown RBP32.31■■■□□ 2.76
Ptx3-201ENSMUST00000029421 Naip2Q9QUK4 1447 aa32.3■■■□□ 2.76
Ptx3-201ENSMUST00000029421 Cdc42bpaQ3UU96 1719 aa32.29■■■□□ 2.76
Ptx3-201ENSMUST00000029421 Kiaa1551Q5DTW7 1521 aa32.29■■■□□ 2.76
Ptx3-201ENSMUST00000029421 Cdk11bP24788 784 aaKnown RBP32.28■■■□□ 2.76
Ptx3-201ENSMUST00000029421 Rrbp1Q99PL5 1605 aaKnown RBP32.28■■■□□ 2.76
Ptx3-201ENSMUST00000029421 Mroh2aD3Z750 1679 aa32.27■■■□□ 2.76
Ptx3-201ENSMUST00000029421 Mia2Q91ZV0 1396 aa32.26■■■□□ 2.75
Ptx3-201ENSMUST00000029421 Magi1Q6RHR9 1471 aa32.26■■■□□ 2.75
Ptx3-201ENSMUST00000029421 Fhad1A6PWD2 1420 aa32.23■■■□□ 2.75
Ptx3-201ENSMUST00000029421 Dhx57Q6P5D3 1388 aaKnown RBP32.23■■■□□ 2.75
Ptx3-201ENSMUST00000029421 Fam163aQ8CAA5 168 aa32.21■■■□□ 2.75
Ptx3-201ENSMUST00000029421 Gm14025A2AP89 1413 aa32.19■■■□□ 2.74
Ptx3-201ENSMUST00000029421 Nop58Q6DFW4 536 aaKnown RBP32.18■■■□□ 2.74
Ptx3-201ENSMUST00000029421 Vps8Q0P5W1 1427 aa32.17■■■□□ 2.74
Ptx3-201ENSMUST00000029421 Mapkbp1Q6NS57 1503 aa32.17■■■□□ 2.74
Ptx3-201ENSMUST00000029421 Abcc1O35379 1528 aa32.16■■■□□ 2.74
Ptx3-201ENSMUST00000029421 Arhgef40Q3UPH7 1517 aa32.12■■■□□ 2.73
Ptx3-201ENSMUST00000029421 Prex2Q3LAC4 1598 aa32.11■■■□□ 2.73
Ptx3-201ENSMUST00000029421 Fkbp15Q6P9Q6 1216 aaKnown RBP32.11■■■□□ 2.73
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms