RNA–Protein interactions for RNA: ENSMUST00000029358.14

Nmd3-201, Transcript of 60S ribosomal export protein NMD3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nmd3, Length 9,135 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nmd3-201ENSMUST00000029358 Ppp4r2Q0VGB7 417 aa8.65□□□□□ -1.03
Nmd3-201ENSMUST00000029358 4933416C03RikQ3V063 378 aa8.64□□□□□ -1.03
Nmd3-201ENSMUST00000029358 Irx3P81067 507 aa8.64□□□□□ -1.03
Nmd3-201ENSMUST00000029358 Znf710Q3U288 666 aa8.64□□□□□ -1.03
Nmd3-201ENSMUST00000029358 SafbD3YXK2 937 aaKnown RBP8.63□□□□□ -1.03
Nmd3-201ENSMUST00000029358 Setd5Q5XJV7 1441 aa8.63□□□□□ -1.03
Nmd3-201ENSMUST00000029358 Eid3Q3V124 375 aa8.63□□□□□ -1.03
Nmd3-201ENSMUST00000029358 Slc24a1Q91WD8 1130 aa8.62□□□□□ -1.03
Nmd3-201ENSMUST00000029358 Ttbk1Q6PCN3 1308 aa8.62□□□□□ -1.03
Nmd3-201ENSMUST00000029358 Ap3b1Q9Z1T1 1105 aa8.61□□□□□ -1.03
Nmd3-201ENSMUST00000029358 Cc2d2aQ8CFW7 1633 aa8.6□□□□□ -1.03
Nmd3-201ENSMUST00000029358 Tcerg1Q8CGF7 1100 aaKnown RBP8.58□□□□□ -1.04
Nmd3-201ENSMUST00000029358 Smg6P61406 1418 aaKnown RBP8.58□□□□□ -1.04
Nmd3-201ENSMUST00000029358 Cecr2E9Q2Z1 1453 aa8.57□□□□□ -1.04
Nmd3-201ENSMUST00000029358 BlmO88700 1416 aa8.57□□□□□ -1.04
Nmd3-201ENSMUST00000029358 Fyco1Q8VDC1 1437 aa8.57□□□□□ -1.04
Nmd3-201ENSMUST00000029358 Washc2Q6PGL7 1334 aa8.57□□□□□ -1.04
Nmd3-201ENSMUST00000029358 Camsap2Q8C1B1 1461 aa8.56□□□□□ -1.04
Nmd3-201ENSMUST00000029358 Eif5bQ05D44 1216 aaKnown RBP8.56□□□□□ -1.04
Nmd3-201ENSMUST00000029358 Smarca4Q3TKT4 1613 aaKnown RBP8.55□□□□□ -1.04
Nmd3-201ENSMUST00000029358 Map3k1P53349 1493 aa8.55□□□□□ -1.04
Nmd3-201ENSMUST00000029358 Ipo9Q91YE6 1041 aa8.54□□□□□ -1.04
Nmd3-201ENSMUST00000029358 Arhgap35Q91YM2 1499 aa8.54□□□□□ -1.04
Nmd3-201ENSMUST00000029358 DaxxO35613 739 aa8.54□□□□□ -1.04
Nmd3-201ENSMUST00000029358 TchhA0A0B4J1F9 1599 aa8.54□□□□□ -1.04
Nmd3-201ENSMUST00000029358 Mrs2Q5NCE8 434 aa8.53□□□□□ -1.04
Nmd3-201ENSMUST00000029358 Fhad1A6PWD2 1420 aa8.53□□□□□ -1.04
Nmd3-201ENSMUST00000029358 Cwc22Q8C5N3 908 aaKnown RBP8.51□□□□□ -1.05
Nmd3-201ENSMUST00000029358 Gtf3c3Q3TMP1 882 aa8.5□□□□□ -1.05
Nmd3-201ENSMUST00000029358 Gm13695A2AK44 830 aa8.5□□□□□ -1.05
Nmd3-201ENSMUST00000029358 Arhgef5E9Q7D5 1581 aa8.5□□□□□ -1.05
Nmd3-201ENSMUST00000029358 Mbd3Q9Z2D8 285 aaKnown RBP8.49□□□□□ -1.05
Nmd3-201ENSMUST00000029358 Nolc1E9Q5C9 702 aaKnown RBP8.49□□□□□ -1.05
Nmd3-201ENSMUST00000029358 CntlnA2AM05 1397 aa8.48□□□□□ -1.05
Nmd3-201ENSMUST00000029358 Tiam1Q60610 1591 aa8.48□□□□□ -1.05
Nmd3-201ENSMUST00000029358 4933402E13RikQ9D4D2 429 aa8.48□□□□□ -1.05
Nmd3-201ENSMUST00000029358 Vps8Q0P5W1 1427 aa8.47□□□□□ -1.05
Nmd3-201ENSMUST00000029358 Rpap1Q80TE0 1409 aa8.47□□□□□ -1.05
Nmd3-201ENSMUST00000029358 Ppm1gQ61074 542 aa8.46□□□□□ -1.06
Nmd3-201ENSMUST00000029358 Hdac5Q9Z2V6 1113 aa8.45□□□□□ -1.06
Nmd3-201ENSMUST00000029358 Cux1P53564 1515 aa8.44□□□□□ -1.06
Nmd3-201ENSMUST00000029358 PrkcshO08795 521 aa8.44□□□□□ -1.06
Nmd3-201ENSMUST00000029358 Htatsf1Q8BGC0 757 aa8.44□□□□□ -1.06
Nmd3-201ENSMUST00000029358 Eif4g1Q6NZJ6 1600 aaKnown RBP8.43□□□□□ -1.06
Nmd3-201ENSMUST00000029358 Arap1Q4LDD4 1452 aa8.43□□□□□ -1.06
Nmd3-201ENSMUST00000029358 AU015836B2RUM3 263 aa8.43□□□□□ -1.06
Nmd3-201ENSMUST00000029358 Ofd1Q80Z25 1017 aa8.43□□□□□ -1.06
Nmd3-201ENSMUST00000029358 NrkQ9R0G8 1455 aa8.43□□□□□ -1.06
Nmd3-201ENSMUST00000029358 Naip1Q9QWK5 1403 aa8.4□□□□□ -1.06
Nmd3-201ENSMUST00000029358 Polr1aO35134 1717 aaKnown RBP8.4□□□□□ -1.07
Nmd3-201ENSMUST00000029358 Hspa5P20029 655 aaKnown RBP8.39□□□□□ -1.07
Nmd3-201ENSMUST00000029358 Il27Q8K3I6 234 aa8.39□□□□□ -1.07
Nmd3-201ENSMUST00000029358 Ncoa2Q61026 1462 aa8.39□□□□□ -1.07
Nmd3-201ENSMUST00000029358 Arid4bA2CG63 1314 aaKnown RBP8.39□□□□□ -1.07
Nmd3-201ENSMUST00000029358 Shroom4Q1W617 1475 aa8.39□□□□□ -1.07
Nmd3-201ENSMUST00000029358 Rock2P70336 1388 aa8.38□□□□□ -1.07
Nmd3-201ENSMUST00000029358 CanxP35564 591 aaKnown RBP8.38□□□□□ -1.07
Nmd3-201ENSMUST00000029358 Erich3F6QRE9 1637 aa8.38□□□□□ -1.07
Nmd3-201ENSMUST00000029358 Pdcl3Q8BVF2 240 aa8.37□□□□□ -1.07
Nmd3-201ENSMUST00000029358 4930567H17RikQ3V0K5 233 aa8.37□□□□□ -1.07
Nmd3-201ENSMUST00000029358 Kdm5bQ80Y84 1544 aa8.36□□□□□ -1.07
Nmd3-201ENSMUST00000029358 Pknox2Q8BG99 474 aa8.36□□□□□ -1.07
Nmd3-201ENSMUST00000029358 Mapk8ip3Q9ESN9 1337 aa8.35□□□□□ -1.07
Nmd3-201ENSMUST00000029358 Mre11Q61216 706 aa8.35□□□□□ -1.07
Nmd3-201ENSMUST00000029358 Efcab5A0JP43 1406 aa8.34□□□□□ -1.07
Nmd3-201ENSMUST00000029358 Crocc2F6XLV1 1638 aa8.34□□□□□ -1.07
Nmd3-201ENSMUST00000029358 Ipo4Q8VI75 1082 aa8.34□□□□□ -1.07
Nmd3-201ENSMUST00000029358 Lmod2Q3UHZ5 550 aa8.34□□□□□ -1.07
Nmd3-201ENSMUST00000029358 AqrQ8CFQ3 1481 aaKnown RBP8.34□□□□□ -1.07
Nmd3-201ENSMUST00000029358 Iqgap2Q3UQ44 1575 aa8.34□□□□□ -1.07
Nmd3-201ENSMUST00000029358 Dnai1Q8C0M8 701 aa8.34□□□□□ -1.07
Nmd3-201ENSMUST00000029358 Carmil1Q6EDY6 1374 aa8.34□□□□□ -1.07
Nmd3-201ENSMUST00000029358 BicraF8VPZ9 1578 aa8.32□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Atad2bE9Q166 1460 aaKnown RBP8.32□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Prkrip1Q9CWV6 186 aaKnown RBP8.32□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Fgd1P52734 960 aa8.31□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Peg3Q3URU2 1571 aa8.31□□□□□ -1.08
Nmd3-201ENSMUST00000029358 AampJ3QN89 436 aa8.31□□□□□ -1.08
Nmd3-201ENSMUST00000029358 PnisrA2AJT4 805 aaKnown RBP8.31□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Kif15Q6P9L6 1387 aa8.31□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Mroh2bQ7M6Y6 1581 aa8.3□□□□□ -1.08
Nmd3-201ENSMUST00000029358 TnnQ80Z71 1560 aa8.3□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Mink1Q9JM52 1308 aa8.3□□□□□ -1.08
Nmd3-201ENSMUST00000029358 EspnQ9ET47 871 aa8.3□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Naip5Q9R016 1403 aa8.3□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Pds5bQ4VA53 1446 aaKnown RBP8.3□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Npm1Q61937 292 aaKnown RBP8.3□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Wwc2Q6NXJ0 1187 aa8.29□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Exoc6Q8R313 802 aa8.29□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Iqcf3Q9D498 203 aa8.29□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Zscan21Q07231 555 aa8.29□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Rrp9Q91WM3 475 aaKnown RBP8.28□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Cul7Q8VE73 1689 aa8.28□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Ifnlr1Q8CGK5 535 aa8.28□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Ncoa1P70365 1447 aa8.28□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Mak16Q8BGS0 296 aaKnown RBP8.28□□□□□ -1.08
Nmd3-201ENSMUST00000029358 P3h3Q8CG70 732 aa8.28□□□□□ -1.08
Nmd3-201ENSMUST00000029358 Plekhg5Q66T02 1073 aa8.27□□□□□ -1.09
Nmd3-201ENSMUST00000029358 Gtf2a1Q99PM3 378 aa8.27□□□□□ -1.09
Nmd3-201ENSMUST00000029358 Chmp5Q9D7S9 219 aa8.27□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 80.7 ms