RNA–Protein interactions for RNA: ENSMUST00000029358.14

Nmd3-201, Transcript of 60S ribosomal export protein NMD3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nmd3, Length 9,135 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nmd3-201ENSMUST00000029358 Rpgrip1Q9EPQ2 1331 aa11.15□□□□□ -0.63
Nmd3-201ENSMUST00000029358 Rtl1Q7M732 1744 aa10.9□□□□□ -0.66
Nmd3-201ENSMUST00000029358 NischQ80TM9 1593 aa10.71□□□□□ -0.69
Nmd3-201ENSMUST00000029358 Ccdc180J3QNE4 1664 aa10.65□□□□□ -0.7
Nmd3-201ENSMUST00000029358 Rhox8Q6VSS7 320 aa10.58□□□□□ -0.72
Nmd3-201ENSMUST00000029358 Abcc9P70170 1546 aa10.34□□□□□ -0.75
Nmd3-201ENSMUST00000029358 Acin1Q9JIX8 1338 aaKnown RBP10.32□□□□□ -0.76
Nmd3-201ENSMUST00000029358 Gm35339A0A140LHH9 1649 aa10.25□□□□□ -0.77
Nmd3-201ENSMUST00000029358 Las1lA2BE28 776 aaKnown RBP10.23□□□□□ -0.77
Nmd3-201ENSMUST00000029358 Cngb1E1AZ71 1325 aa10.12□□□□□ -0.79
Nmd3-201ENSMUST00000029358 HrcG5E8J6 738 aa10.09□□□□□ -0.79
Nmd3-201ENSMUST00000029358 Myt1Q8CFC2 1127 aa10.02□□□□□ -0.81
Nmd3-201ENSMUST00000029358 Dcaf1Q80TR8 1506 aa9.98□□□□□ -0.81
Nmd3-201ENSMUST00000029358 Pcgf6Q99NA9 353 aa9.98□□□□□ -0.81
Nmd3-201ENSMUST00000029358 Abcc8B2RUS7 1588 aa9.95□□□□□ -0.82
Nmd3-201ENSMUST00000029358 NefmP08553 848 aa9.83□□□□□ -0.84
Nmd3-201ENSMUST00000029358 Zcchc6Q5BLK4 1491 aaKnown RBP9.73□□□□□ -0.85
Nmd3-201ENSMUST00000029358 CenpbP27790 599 aa9.71□□□□□ -0.85
Nmd3-201ENSMUST00000029358 Ehmt2Q9Z148 1263 aaKnown RBP9.71□□□□□ -0.86
Nmd3-201ENSMUST00000029358 Trim41Q5NCC3 630 aa9.69□□□□□ -0.86
Nmd3-201ENSMUST00000029358 Supt5hO55201 1082 aaKnown RBP9.58□□□□□ -0.88
Nmd3-201ENSMUST00000029358 Ccdc136Q3TVA9 1136 aa9.56□□□□□ -0.88
Nmd3-201ENSMUST00000029358 Cep164Q5DU05 1446 aa9.55□□□□□ -0.88
Nmd3-201ENSMUST00000029358 Zeb1Q64318 1117 aa9.53□□□□□ -0.88
Nmd3-201ENSMUST00000029358 Anks4bQ8K3X6 423 aa9.52□□□□□ -0.88
Nmd3-201ENSMUST00000029358 Neurod1Q60867 357 aa9.51□□□□□ -0.89
Nmd3-201ENSMUST00000029358 Pelp1Q9DBD5 1123 aaKnown RBP9.5□□□□□ -0.89
Nmd3-201ENSMUST00000029358 Cdk11bP24788 784 aaKnown RBP9.47□□□□□ -0.89
Nmd3-201ENSMUST00000029358 Aplp2Q06335 707 aa9.46□□□□□ -0.9
Nmd3-201ENSMUST00000029358 Rb1cc1Q9ESK9 1588 aa9.43□□□□□ -0.9
Nmd3-201ENSMUST00000029358 Tnnt3Q9QZ47 272 aa9.41□□□□□ -0.9
Nmd3-201ENSMUST00000029358 Stra8P70278 393 aa9.4□□□□□ -0.91
Nmd3-201ENSMUST00000029358 Wdr66E9Q743 1299 aa9.39□□□□□ -0.91
Nmd3-201ENSMUST00000029358 Nop58Q6DFW4 536 aaKnown RBP9.37□□□□□ -0.91
Nmd3-201ENSMUST00000029358 Rtl5Q5DTT4 599 aa9.36□□□□□ -0.91
Nmd3-201ENSMUST00000029358 Baz1aO88379 1555 aa9.36□□□□□ -0.91
Nmd3-201ENSMUST00000029358 ClspnQ80YR7 1315 aa9.34□□□□□ -0.91
Nmd3-201ENSMUST00000029358 1700123L14RikQ3V2K7 440 aa9.29□□□□□ -0.92
Nmd3-201ENSMUST00000029358 DiexfQ8BTT6 772 aaKnown RBP9.29□□□□□ -0.92
Nmd3-201ENSMUST00000029358 Mier1Q5UAK0 511 aa9.27□□□□□ -0.93
Nmd3-201ENSMUST00000029358 Sall2Q9QX96 1004 aa9.24□□□□□ -0.93
Nmd3-201ENSMUST00000029358 Crybg2B7ZCC2 1516 aa9.21□□□□□ -0.93
Nmd3-201ENSMUST00000029358 Gab3Q8BSM5 595 aa9.21□□□□□ -0.94
Nmd3-201ENSMUST00000029358 Brd4Q9ESU6 1400 aaKnown RBP9.21□□□□□ -0.94
Nmd3-201ENSMUST00000029358 Csrnp3P59055 597 aa9.2□□□□□ -0.94
Nmd3-201ENSMUST00000029358 TonslQ6NZL6 1363 aa9.17□□□□□ -0.94
Nmd3-201ENSMUST00000029358 UbtfP25976 765 aaKnown RBP9.11□□□□□ -0.95
Nmd3-201ENSMUST00000029358 Anp32aO35381 247 aa9.1□□□□□ -0.95
Nmd3-201ENSMUST00000029358 Esf1Q3V1V3 845 aaKnown RBP9.1□□□□□ -0.95
Nmd3-201ENSMUST00000029358 Smarca2Q6DIC0 1577 aa9.09□□□□□ -0.95
Nmd3-201ENSMUST00000029358 NacadQ5SWP3 1504 aa9.08□□□□□ -0.96
Nmd3-201ENSMUST00000029358 Amer1Q7TS75 1132 aa9.05□□□□□ -0.96
Nmd3-201ENSMUST00000029358 Golga3P55937 1487 aa9.05□□□□□ -0.96
Nmd3-201ENSMUST00000029358 Ccdc9Q8VC31 543 aaKnown RBP9.05□□□□□ -0.96
Nmd3-201ENSMUST00000029358 Rsf1E9PWW9 1441 aaKnown RBP9.03□□□□□ -0.96
Nmd3-201ENSMUST00000029358 Kdm5dQ62240 1548 aa9□□□□□ -0.97
Nmd3-201ENSMUST00000029358 Chic1Q8CBW7 227 aa8.96□□□□□ -0.97
Nmd3-201ENSMUST00000029358 Npm2Q80W85 207 aa8.96□□□□□ -0.97
Nmd3-201ENSMUST00000029358 Bcl11aQ9QYE3 773 aa8.96□□□□□ -0.98
Nmd3-201ENSMUST00000029358 ScribQ80U72 1612 aa8.95□□□□□ -0.98
Nmd3-201ENSMUST00000029358 Myt1lP97500 1187 aa8.92□□□□□ -0.98
Nmd3-201ENSMUST00000029358 Aebp2Q9Z248 504 aaKnown RBP8.92□□□□□ -0.98
Nmd3-201ENSMUST00000029358 Ccer2J3QPU5 274 aa8.9□□□□□ -0.98
Nmd3-201ENSMUST00000029358 Fam71e1A1L3C1 212 aa8.88□□□□□ -0.99
Nmd3-201ENSMUST00000029358 Clip1Q922J3 1391 aa8.85□□□□□ -0.99
Nmd3-201ENSMUST00000029358 Ccdc88bQ4QRL3 1481 aa8.85□□□□□ -0.99
Nmd3-201ENSMUST00000029358 NclP09405 707 aaKnown RBP8.85□□□□□ -0.99
Nmd3-201ENSMUST00000029358 Calr4Q3TQS0 420 aa8.83□□□□□ -1
Nmd3-201ENSMUST00000029358 Eea1Q8BL66 1411 aa8.8□□□□□ -1
Nmd3-201ENSMUST00000029358 Rapgef2Q8CHG7 1496 aa8.8□□□□□ -1
Nmd3-201ENSMUST00000029358 Fmn1Q05860 1466 aa8.79□□□□□ -1
Nmd3-201ENSMUST00000029358 Cep162Q6ZQ06 1403 aa8.78□□□□□ -1
Nmd3-201ENSMUST00000029358 NrdcQ8BHG1 1161 aa8.78□□□□□ -1
Nmd3-201ENSMUST00000029358 Wdr43Q6ZQL4 677 aaKnown RBP8.77□□□□□ -1.01
Nmd3-201ENSMUST00000029358 Ccdc27Q3V036 639 aa8.77□□□□□ -1.01
Nmd3-201ENSMUST00000029358 Cttnbp2B9EJA2 1648 aa8.76□□□□□ -1.01
Nmd3-201ENSMUST00000029358 Top2bQ64511 1612 aa8.74□□□□□ -1.01
Nmd3-201ENSMUST00000029358 Sycp2Q9CUU3 1500 aa8.74□□□□□ -1.01
Nmd3-201ENSMUST00000029358 Hnrnpul2Q00PI9 745 aaKnown RBP8.74□□□□□ -1.01
Nmd3-201ENSMUST00000029358 Ppargc1bQ8VHJ7 1014 aa8.72□□□□□ -1.01
Nmd3-201ENSMUST00000029358 CftrP26361 1476 aa8.72□□□□□ -1.01
Nmd3-201ENSMUST00000029358 Ccdc18Q640L5 1455 aa8.72□□□□□ -1.01
Nmd3-201ENSMUST00000029358 Gm13697A2AK42 830 aa8.71□□□□□ -1.01
Nmd3-201ENSMUST00000029358 Gm38655A0A286YDK6 273 aa8.71□□□□□ -1.01
Nmd3-201ENSMUST00000029358 NeflP08551 543 aa8.71□□□□□ -1.02
Nmd3-201ENSMUST00000029358 Synj1Q8CHC4 1574 aa8.71□□□□□ -1.02
Nmd3-201ENSMUST00000029358 Plekhg3Q4VAC9 1341 aa8.7□□□□□ -1.02
Nmd3-201ENSMUST00000029358 Mia2Q91ZV0 1396 aa8.69□□□□□ -1.02
Nmd3-201ENSMUST00000029358 Anp32bQ9EST5 272 aaKnown RBP8.69□□□□□ -1.02
Nmd3-201ENSMUST00000029358 Ube2uB1AUC4 352 aa8.68□□□□□ -1.02
Nmd3-201ENSMUST00000029358 Upf2A2AT37 1269 aaKnown RBP8.67□□□□□ -1.02
Nmd3-201ENSMUST00000029358 Top2aQ01320 1528 aaKnown RBP8.67□□□□□ -1.02
Nmd3-201ENSMUST00000029358 Baz1bQ9Z277 1479 aa8.67□□□□□ -1.02
Nmd3-201ENSMUST00000029358 Supt16hQ920B9 1047 aa8.66□□□□□ -1.02
Nmd3-201ENSMUST00000029358 Mapk8ip2Q9ERE9 830 aa8.66□□□□□ -1.02
Nmd3-201ENSMUST00000029358 Ncapd3Q6ZQK0 1506 aa8.66□□□□□ -1.02
Nmd3-201ENSMUST00000029358 UacaQ8CGB3 1411 aa8.66□□□□□ -1.02
Nmd3-201ENSMUST00000029358 Hsp90aa1P07901 733 aaKnown RBP8.65□□□□□ -1.02
Nmd3-201ENSMUST00000029358 Fam50aQ9WV03 339 aaKnown RBP8.65□□□□□ -1.02
Nmd3-201ENSMUST00000029358 Ankrd36D3Z4K0 1415 aa8.65□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms