RNA–Protein interactions for RNA: ENSMUST00000027559.7

Tnfrsf11a-201, Transcript of Tumor necrosis factor receptor superfamily member 11A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tnfrsf11a, Length 5,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11a-201ENSMUST00000027559 Irx3P81067 507 aa19.22■□□□□ 0.67
Tnfrsf11a-201ENSMUST00000027559 Prdm10Q3UTQ7 1184 aa19.22■□□□□ 0.67
Tnfrsf11a-201ENSMUST00000027559 Lmod3E9QA62 571 aa19.22■□□□□ 0.67
Tnfrsf11a-201ENSMUST00000027559 Htatsf1Q8BGC0 757 aa19.21■□□□□ 0.67
Tnfrsf11a-201ENSMUST00000027559 Hsp90ab1P11499 724 aaKnown RBP19.21■□□□□ 0.67
Tnfrsf11a-201ENSMUST00000027559 Trim30dE9PWL0 497 aa19.16■□□□□ 0.66
Tnfrsf11a-201ENSMUST00000027559 Ofd1Q80Z25 1017 aa19.16■□□□□ 0.66
Tnfrsf11a-201ENSMUST00000027559 Ppm1gQ61074 542 aa19.13■□□□□ 0.65
Tnfrsf11a-201ENSMUST00000027559 BlmO88700 1416 aa19.12■□□□□ 0.65
Tnfrsf11a-201ENSMUST00000027559 Atp1b4Q99ME6 356 aa19.08■□□□□ 0.65
Tnfrsf11a-201ENSMUST00000027559 Chic2Q9D9G3 165 aa19.08■□□□□ 0.64
Tnfrsf11a-201ENSMUST00000027559 SafbD3YXK2 937 aaKnown RBP19.07■□□□□ 0.64
Tnfrsf11a-201ENSMUST00000027559 P3h3Q8CG70 732 aa19.06■□□□□ 0.64
Tnfrsf11a-201ENSMUST00000027559 Vsig10D3YX43 558 aa19.06■□□□□ 0.64
Tnfrsf11a-201ENSMUST00000027559 Gm13697A2AK42 830 aa19.05■□□□□ 0.64
Tnfrsf11a-201ENSMUST00000027559 Clstn2Q9ER65 966 aa19.01■□□□□ 0.63
Tnfrsf11a-201ENSMUST00000027559 PtmaP26350 111 aa19■□□□□ 0.63
Tnfrsf11a-201ENSMUST00000027559 AU015836B2RUM3 263 aa18.99■□□□□ 0.63
Tnfrsf11a-201ENSMUST00000027559 Rangap1P46061 589 aaKnown RBP18.98■□□□□ 0.63
Tnfrsf11a-201ENSMUST00000027559 Setd5Q5XJV7 1441 aa18.98■□□□□ 0.63
Tnfrsf11a-201ENSMUST00000027559 Plcb2A3KGF7 1181 aa18.98■□□□□ 0.63
Tnfrsf11a-201ENSMUST00000027559 Baz1aO88379 1555 aa18.96■□□□□ 0.63
Tnfrsf11a-201ENSMUST00000027559 Tcerg1Q8CGF7 1100 aaKnown RBP18.93■□□□□ 0.62
Tnfrsf11a-201ENSMUST00000027559 Cwc22Q8C5N3 908 aaKnown RBP18.91■□□□□ 0.62
Tnfrsf11a-201ENSMUST00000027559 Fgd1P52734 960 aa18.9■□□□□ 0.62
Tnfrsf11a-201ENSMUST00000027559 NacadQ5SWP3 1504 aa18.88■□□□□ 0.61
Tnfrsf11a-201ENSMUST00000027559 Rgl3Q3UYI5 709 aa18.86■□□□□ 0.61
Tnfrsf11a-201ENSMUST00000027559 Mbd3Q9Z2D8 285 aaKnown RBP18.86■□□□□ 0.61
Tnfrsf11a-201ENSMUST00000027559 Supt16hQ920B9 1047 aa18.84■□□□□ 0.61
Tnfrsf11a-201ENSMUST00000027559 Fkbp15Q6P9Q6 1216 aaKnown RBP18.82■□□□□ 0.6
Tnfrsf11a-201ENSMUST00000027559 Trim26Q99PN3 545 aa18.82■□□□□ 0.6
Tnfrsf11a-201ENSMUST00000027559 Adam1bQ8R534 806 aa18.81■□□□□ 0.6
Tnfrsf11a-201ENSMUST00000027559 Gm13695A2AK44 830 aa18.81■□□□□ 0.6
Tnfrsf11a-201ENSMUST00000027559 Golga3P55937 1487 aa18.81■□□□□ 0.6
Tnfrsf11a-201ENSMUST00000027559 Arid4bA2CG63 1314 aaKnown RBP18.8■□□□□ 0.6
Tnfrsf11a-201ENSMUST00000027559 Ifnlr1Q8CGK5 535 aa18.8■□□□□ 0.6
Tnfrsf11a-201ENSMUST00000027559 Eea1Q8BL66 1411 aa18.8■□□□□ 0.6
Tnfrsf11a-201ENSMUST00000027559 Ipo9Q91YE6 1041 aa18.8■□□□□ 0.6
Tnfrsf11a-201ENSMUST00000027559 Map7O88735 730 aa18.79■□□□□ 0.6
Tnfrsf11a-201ENSMUST00000027559 Tnnt2P50752 301 aa18.78■□□□□ 0.6
Tnfrsf11a-201ENSMUST00000027559 Kdm5dQ62240 1548 aa18.78■□□□□ 0.6
Tnfrsf11a-201ENSMUST00000027559 Card11Q8CIS0 1159 aa18.77■□□□□ 0.59
Tnfrsf11a-201ENSMUST00000027559 Dnttip2Q8R2M2 758 aaKnown RBP18.77■□□□□ 0.59
Tnfrsf11a-201ENSMUST00000027559 Apbb1Q9QXJ1 710 aa18.76■□□□□ 0.59
Tnfrsf11a-201ENSMUST00000027559 Dbr1Q923B1 550 aa18.75■□□□□ 0.59
Tnfrsf11a-201ENSMUST00000027559 Dnai1Q8C0M8 701 aa18.75■□□□□ 0.59
Tnfrsf11a-201ENSMUST00000027559 Spryd3E9Q9B3 442 aa18.73■□□□□ 0.59
Tnfrsf11a-201ENSMUST00000027559 Slc4a3P16283 1227 aa18.73■□□□□ 0.59
Tnfrsf11a-201ENSMUST00000027559 B4galnt3Q6L8S8 986 aa18.73■□□□□ 0.59
Tnfrsf11a-201ENSMUST00000027559 Chmp4bQ9D8B3 224 aaKnown RBP18.73■□□□□ 0.59
Tnfrsf11a-201ENSMUST00000027559 Mia2Q91ZV0 1396 aa18.72■□□□□ 0.59
Tnfrsf11a-201ENSMUST00000027559 Casc1Q6TDU8 730 aa18.7■□□□□ 0.58
Tnfrsf11a-201ENSMUST00000027559 Rwdd1Q9CQK7 243 aa18.67■□□□□ 0.58
Tnfrsf11a-201ENSMUST00000027559 Chmp5Q9D7S9 219 aa18.67■□□□□ 0.58
Tnfrsf11a-201ENSMUST00000027559 Wwc2Q6NXJ0 1187 aa18.66■□□□□ 0.58
Tnfrsf11a-201ENSMUST00000027559 Neurod2Q62414 383 aa18.65■□□□□ 0.58
Tnfrsf11a-201ENSMUST00000027559 Grwd1Q810D6 446 aaKnown RBP18.65■□□□□ 0.58
Tnfrsf11a-201ENSMUST00000027559 Gtf3c3Q3TMP1 882 aa18.64■□□□□ 0.58
Tnfrsf11a-201ENSMUST00000027559 Rsf1E9PWW9 1441 aaKnown RBP18.63■□□□□ 0.57
Tnfrsf11a-201ENSMUST00000027559 EspnQ9ET47 871 aa18.63■□□□□ 0.57
Tnfrsf11a-201ENSMUST00000027559 KnstrnQ9D9Z1 312 aaKnown RBP18.62■□□□□ 0.57
Tnfrsf11a-201ENSMUST00000027559 ScribQ80U72 1612 aa18.61■□□□□ 0.57
Tnfrsf11a-201ENSMUST00000027559 Rrp12Q6P5B0 1295 aaKnown RBP18.61■□□□□ 0.57
Tnfrsf11a-201ENSMUST00000027559 PtmsQ9D0J8 101 aaKnown RBP18.61■□□□□ 0.57
Tnfrsf11a-201ENSMUST00000027559 Erich6bQ9D4S6 220 aa18.61■□□□□ 0.57
Tnfrsf11a-201ENSMUST00000027559 Hspa5P20029 655 aaKnown RBP18.59■□□□□ 0.57
Tnfrsf11a-201ENSMUST00000027559 MsnP26041 577 aaKnown RBP18.59■□□□□ 0.57
Tnfrsf11a-201ENSMUST00000027559 Mapk8ip3Q9ESN9 1337 aa18.58■□□□□ 0.56
Tnfrsf11a-201ENSMUST00000027559 4933402E13RikQ9D4D2 429 aa18.56■□□□□ 0.56
Tnfrsf11a-201ENSMUST00000027559 NudcO35685 332 aaKnown RBP18.55■□□□□ 0.56
Tnfrsf11a-201ENSMUST00000027559 Ubl4bQ9CQ84 188 aa18.54■□□□□ 0.56
Tnfrsf11a-201ENSMUST00000027559 Armcx1Q9CX83 456 aa18.53■□□□□ 0.56
Tnfrsf11a-201ENSMUST00000027559 Mroh3A0A1D5RM54 893 aa18.52■□□□□ 0.56
Tnfrsf11a-201ENSMUST00000027559 Exoc6Q8R313 802 aa18.52■□□□□ 0.56
Tnfrsf11a-201ENSMUST00000027559 Nolc1E9Q5C9 702 aaKnown RBP18.51■□□□□ 0.55
Tnfrsf11a-201ENSMUST00000027559 Ipo8Q7TMY7 1010 aa18.51■□□□□ 0.55
Tnfrsf11a-201ENSMUST00000027559 IqubQ8CDK3 788 aa18.51■□□□□ 0.55
Tnfrsf11a-201ENSMUST00000027559 Kdm2aP59997 1161 aa18.51■□□□□ 0.55
Tnfrsf11a-201ENSMUST00000027559 Ddrgk1Q80WW9 315 aa18.5■□□□□ 0.55
Tnfrsf11a-201ENSMUST00000027559 Srpk2O54781 681 aaKnown RBP18.48■□□□□ 0.55
Tnfrsf11a-201ENSMUST00000027559 Zscan21Q07231 555 aa18.47■□□□□ 0.55
Tnfrsf11a-201ENSMUST00000027559 Mak16Q8BGS0 296 aaKnown RBP18.47■□□□□ 0.55
Tnfrsf11a-201ENSMUST00000027559 Calcoco2A2A6M5 331 aa18.47■□□□□ 0.55
Tnfrsf11a-201ENSMUST00000027559 MccE9PWI3 1003 aa18.46■□□□□ 0.55
Tnfrsf11a-201ENSMUST00000027559 Gm6268A2A3U9 297 aa18.45■□□□□ 0.54
Tnfrsf11a-201ENSMUST00000027559 Gm20521D3Z5F7 333 aa18.45■□□□□ 0.54
Tnfrsf11a-201ENSMUST00000027559 Gm973E9Q295 1059 aa18.45■□□□□ 0.54
Tnfrsf11a-201ENSMUST00000027559 Mtus2Q3UHD3 1353 aa18.45■□□□□ 0.54
Tnfrsf11a-201ENSMUST00000027559 PnnO35691 725 aaKnown RBP18.44■□□□□ 0.54
Tnfrsf11a-201ENSMUST00000027559 Znf316Q6PGE4 1016 aa18.44■□□□□ 0.54
Tnfrsf11a-201ENSMUST00000027559 HnrnpuQ8VEK3 800 aaKnown RBP18.43■□□□□ 0.54
Tnfrsf11a-201ENSMUST00000027559 Crybg2B7ZCC2 1516 aa18.43■□□□□ 0.54
Tnfrsf11a-201ENSMUST00000027559 Hsp90b1P08113 802 aaKnown RBP18.42■□□□□ 0.54
Tnfrsf11a-201ENSMUST00000027559 Exosc9Q9JHI7 438 aaKnown RBP18.42■□□□□ 0.54
Tnfrsf11a-201ENSMUST00000027559 Pknox2Q8BG99 474 aa18.41■□□□□ 0.54
Tnfrsf11a-201ENSMUST00000027559 Taok2Q6ZQ29 1240 aa18.41■□□□□ 0.54
Tnfrsf11a-201ENSMUST00000027559 Sin3aQ60520 1274 aaKnown RBP18.4■□□□□ 0.54
Tnfrsf11a-201ENSMUST00000027559 Speer4f1Q9D5Q6 258 aa18.39■□□□□ 0.53
Tnfrsf11a-201ENSMUST00000027559 Iqcf3Q9D498 203 aa18.38■□□□□ 0.53
Tnfrsf11a-201ENSMUST00000027559 VgfQ0VGU4 617 aa18.38■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 92 ms