RNA–Protein interactions for RNA: ENSMUST00000021288.9

Usp43-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp43, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43-201ENSMUST00000021288 Rad21Q61550 635 aaKnown RBP20.94■□□□□ 0.94
Usp43-201ENSMUST00000021288 CftrP26361 1476 aa20.94■□□□□ 0.94
Usp43-201ENSMUST00000021288 Atp1b4Q99ME6 356 aa20.94■□□□□ 0.94
Usp43-201ENSMUST00000021288 P3h3Q8CG70 732 aa20.94■□□□□ 0.94
Usp43-201ENSMUST00000021288 Smarca2Q6DIC0 1577 aa20.89■□□□□ 0.94
Usp43-201ENSMUST00000021288 Polr3glQ8R0C0 218 aa20.89■□□□□ 0.93
Usp43-201ENSMUST00000021288 Nlrp6Q91WS2 869 aa20.87■□□□□ 0.93
Usp43-201ENSMUST00000021288 Ccdc18Q640L5 1455 aa20.87■□□□□ 0.93
Usp43-201ENSMUST00000021288 Grwd1Q810D6 446 aaKnown RBP20.86■□□□□ 0.93
Usp43-201ENSMUST00000021288 Gm13697A2AK42 830 aa20.85■□□□□ 0.93
Usp43-201ENSMUST00000021288 SafbD3YXK2 937 aaKnown RBP20.85■□□□□ 0.93
Usp43-201ENSMUST00000021288 Fmn1Q05860 1466 aa20.83■□□□□ 0.93
Usp43-201ENSMUST00000021288 Arhgap27A2AB59 869 aa20.83■□□□□ 0.92
Usp43-201ENSMUST00000021288 Synj1Q8CHC4 1574 aa20.82■□□□□ 0.92
Usp43-201ENSMUST00000021288 Rangap1P46061 589 aaKnown RBP20.82■□□□□ 0.92
Usp43-201ENSMUST00000021288 ArxO35085 564 aa20.82■□□□□ 0.92
Usp43-201ENSMUST00000021288 Ercc6F8VPZ5 1481 aa20.8■□□□□ 0.92
Usp43-201ENSMUST00000021288 Plppr3Q7TPB0 716 aa20.8■□□□□ 0.92
Usp43-201ENSMUST00000021288 Rapgef2Q8CHG7 1496 aa20.79■□□□□ 0.92
Usp43-201ENSMUST00000021288 Crybg2B7ZCC2 1516 aa20.78■□□□□ 0.92
Usp43-201ENSMUST00000021288 Sin3aQ60520 1274 aaKnown RBP20.78■□□□□ 0.92
Usp43-201ENSMUST00000021288 Wdr43Q6ZQL4 677 aaKnown RBP20.72■□□□□ 0.91
Usp43-201ENSMUST00000021288 DaxxO35613 739 aa20.71■□□□□ 0.91
Usp43-201ENSMUST00000021288 Fam71e1A1L3C1 212 aa20.7■□□□□ 0.9
Usp43-201ENSMUST00000021288 Aebp1Q640N1 1128 aa20.67■□□□□ 0.9
Usp43-201ENSMUST00000021288 Wwc2Q6NXJ0 1187 aa20.67■□□□□ 0.9
Usp43-201ENSMUST00000021288 Rtl5Q5DTT4 599 aa20.66■□□□□ 0.9
Usp43-201ENSMUST00000021288 Pds5bQ4VA53 1446 aaKnown RBP20.65■□□□□ 0.9
Usp43-201ENSMUST00000021288 Kdm2aP59997 1161 aa20.65■□□□□ 0.9
Usp43-201ENSMUST00000021288 Ofd1Q80Z25 1017 aa20.6■□□□□ 0.89
Usp43-201ENSMUST00000021288 Card11Q8CIS0 1159 aa20.58■□□□□ 0.88
Usp43-201ENSMUST00000021288 Rrp7aQ9D1C9 280 aaKnown RBP20.58■□□□□ 0.88
Usp43-201ENSMUST00000021288 Gm13695A2AK44 830 aa20.57■□□□□ 0.88
Usp43-201ENSMUST00000021288 Clstn2Q9ER65 966 aa20.57■□□□□ 0.88
Usp43-201ENSMUST00000021288 Cabp1Q9JLK7 227 aa20.56■□□□□ 0.88
Usp43-201ENSMUST00000021288 Pkd2O35245 966 aa20.53■□□□□ 0.88
Usp43-201ENSMUST00000021288 Baz1bQ9Z277 1479 aa20.53■□□□□ 0.88
Usp43-201ENSMUST00000021288 Kif27Q7M6Z4 1394 aa20.53■□□□□ 0.88
Usp43-201ENSMUST00000021288 Mtus2Q3UHD3 1353 aa20.52■□□□□ 0.88
Usp43-201ENSMUST00000021288 Mia2Q91ZV0 1396 aa20.51■□□□□ 0.87
Usp43-201ENSMUST00000021288 Cux2P70298 1426 aa20.51■□□□□ 0.87
Usp43-201ENSMUST00000021288 Trim26Q99PN3 545 aa20.51■□□□□ 0.87
Usp43-201ENSMUST00000021288 Apbb1Q9QXJ1 710 aa20.48■□□□□ 0.87
Usp43-201ENSMUST00000021288 Mroh3A0A1D5RM54 893 aa20.47■□□□□ 0.87
Usp43-201ENSMUST00000021288 Slc4a3P16283 1227 aa20.47■□□□□ 0.87
Usp43-201ENSMUST00000021288 Trak1Q6PD31 939 aa20.43■□□□□ 0.86
Usp43-201ENSMUST00000021288 Mphosph9A6H5Y1 991 aa20.42■□□□□ 0.86
Usp43-201ENSMUST00000021288 Rpap1Q80TE0 1409 aa20.42■□□□□ 0.86
Usp43-201ENSMUST00000021288 Hdac5Q9Z2V6 1113 aa20.41■□□□□ 0.86
Usp43-201ENSMUST00000021288 DiexfQ8BTT6 772 aaKnown RBP20.39■□□□□ 0.85
Usp43-201ENSMUST00000021288 Smarca4Q3TKT4 1613 aaKnown RBP20.39■□□□□ 0.85
Usp43-201ENSMUST00000021288 Exoc6Q8R313 802 aa20.39■□□□□ 0.85
Usp43-201ENSMUST00000021288 Atad2bE9Q166 1460 aaKnown RBP20.39■□□□□ 0.85
Usp43-201ENSMUST00000021288 Neurod2Q62414 383 aa20.38■□□□□ 0.85
Usp43-201ENSMUST00000021288 Rundc1Q0VDN7 615 aa20.37■□□□□ 0.85
Usp43-201ENSMUST00000021288 Fyco1Q8VDC1 1437 aa20.37■□□□□ 0.85
Usp43-201ENSMUST00000021288 Upf2A2AT37 1269 aaKnown RBP20.36■□□□□ 0.85
Usp43-201ENSMUST00000021288 Map4P27546 1125 aaKnown RBP20.36■□□□□ 0.85
Usp43-201ENSMUST00000021288 Stk24Q99KH8 431 aa20.35■□□□□ 0.85
Usp43-201ENSMUST00000021288 CntlnA2AM05 1397 aa20.34■□□□□ 0.85
Usp43-201ENSMUST00000021288 Cwc22Q8C5N3 908 aaKnown RBP20.34■□□□□ 0.85
Usp43-201ENSMUST00000021288 Gm20521D3Z5F7 333 aa20.31■□□□□ 0.84
Usp43-201ENSMUST00000021288 Ecm2Q5FW85 670 aa20.3■□□□□ 0.84
Usp43-201ENSMUST00000021288 Cttnbp2B9EJA2 1648 aa20.3■□□□□ 0.84
Usp43-201ENSMUST00000021288 Cnga1P29974 684 aa20.3■□□□□ 0.84
Usp43-201ENSMUST00000021288 Arhgap35Q91YM2 1499 aa20.29■□□□□ 0.84
Usp43-201ENSMUST00000021288 Carmil1Q6EDY6 1374 aa20.27■□□□□ 0.84
Usp43-201ENSMUST00000021288 Srpk2O54781 681 aaKnown RBP20.26■□□□□ 0.83
Usp43-201ENSMUST00000021288 Arid3cA6PWV5 409 aa20.26■□□□□ 0.83
Usp43-201ENSMUST00000021288 Dbr1Q923B1 550 aa20.26■□□□□ 0.83
Usp43-201ENSMUST00000021288 Ccnb3Q810T2 1396 aa20.26■□□□□ 0.83
Usp43-201ENSMUST00000021288 LrpprcQ6PB66 1392 aaKnown RBP20.25■□□□□ 0.83
Usp43-201ENSMUST00000021288 Trim30dE9PWL0 497 aa20.23■□□□□ 0.83
Usp43-201ENSMUST00000021288 Phldb1Q6PDH0 1371 aaKnown RBP20.23■□□□□ 0.83
Usp43-201ENSMUST00000021288 Ifit1bl1D3Z6F0 470 aa20.22■□□□□ 0.83
Usp43-201ENSMUST00000021288 CanxP35564 591 aaKnown RBP20.21■□□□□ 0.83
Usp43-201ENSMUST00000021288 AknaQ80VW7 1404 aa20.21■□□□□ 0.83
Usp43-201ENSMUST00000021288 B4galnt3Q6L8S8 986 aa20.2■□□□□ 0.82
Usp43-201ENSMUST00000021288 Iqgap2Q3UQ44 1575 aa20.19■□□□□ 0.82
Usp43-201ENSMUST00000021288 Cc2d2aQ8CFW7 1633 aa20.18■□□□□ 0.82
Usp43-201ENSMUST00000021288 Dhx29Q6PGC1 1365 aaKnown RBP20.16■□□□□ 0.82
Usp43-201ENSMUST00000021288 Armcx1Q9CX83 456 aa20.14■□□□□ 0.81
Usp43-201ENSMUST00000021288 Exosc9Q9JHI7 438 aaKnown RBP20.14■□□□□ 0.81
Usp43-201ENSMUST00000021288 Arid4bA2CG63 1314 aaKnown RBP20.13■□□□□ 0.81
Usp43-201ENSMUST00000021288 Irx6Q9ER75 438 aa20.1■□□□□ 0.81
Usp43-201ENSMUST00000021288 Vsig10D3YX43 558 aa20.08■□□□□ 0.81
Usp43-201ENSMUST00000021288 Stag3O70576 1240 aa20.08■□□□□ 0.81
Usp43-201ENSMUST00000021288 IqubQ8CDK3 788 aa20.08■□□□□ 0.8
Usp43-201ENSMUST00000021288 Zfp644E9QA22 1323 aa20.07■□□□□ 0.8
Usp43-201ENSMUST00000021288 Supt16hQ920B9 1047 aa20.07■□□□□ 0.8
Usp43-201ENSMUST00000021288 Safb2Q80YR5 991 aaKnown RBP20.06■□□□□ 0.8
Usp43-201ENSMUST00000021288 Usp47Q8BY87 1376 aa20.06■□□□□ 0.8
Usp43-201ENSMUST00000021288 PtprkP35822 1457 aa20.06■□□□□ 0.8
Usp43-201ENSMUST00000021288 Hsp90ab1P11499 724 aaKnown RBP20.06■□□□□ 0.8
Usp43-201ENSMUST00000021288 Top2aQ01320 1528 aaKnown RBP20.05■□□□□ 0.8
Usp43-201ENSMUST00000021288 Nolc1E9Q5C9 702 aaKnown RBP20.04■□□□□ 0.8
Usp43-201ENSMUST00000021288 WrnO09053 1401 aa20.03■□□□□ 0.8
Usp43-201ENSMUST00000021288 Zscan21Q07231 555 aa20.03■□□□□ 0.8
Usp43-201ENSMUST00000021288 4930567H17RikQ3V0K5 233 aa20.03■□□□□ 0.8
Usp43-201ENSMUST00000021288 Sart1Q9Z315 806 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms