RNA–Protein interactions for RNA: ENSMUST00000000109.10

Cntn1-201, Transcript of Contactin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cntn1, Length 5,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1-201ENSMUST00000000109 Chic1Q8CBW7 227 aa8□□□□□ -1.13
Cntn1-201ENSMUST00000000109 Ube2q2Q8K2Z8 378 aa8□□□□□ -1.13
Cntn1-201ENSMUST00000000109 Zcchc6Q5BLK4 1491 aaKnown RBP7.99□□□□□ -1.13
Cntn1-201ENSMUST00000000109 Plekhg3Q4VAC9 1341 aa7.98□□□□□ -1.13
Cntn1-201ENSMUST00000000109 Irx3P81067 507 aa7.98□□□□□ -1.13
Cntn1-201ENSMUST00000000109 Prdm10Q3UTQ7 1184 aa7.97□□□□□ -1.13
Cntn1-201ENSMUST00000000109 Os9Q8K2C7 672 aa7.94□□□□□ -1.14
Cntn1-201ENSMUST00000000109 Hdac5Q9Z2V6 1113 aa7.94□□□□□ -1.14
Cntn1-201ENSMUST00000000109 Arid4bA2CG63 1314 aaKnown RBP7.93□□□□□ -1.14
Cntn1-201ENSMUST00000000109 Upf2A2AT37 1269 aaKnown RBP7.92□□□□□ -1.14
Cntn1-201ENSMUST00000000109 Supt16hQ920B9 1047 aa7.92□□□□□ -1.14
Cntn1-201ENSMUST00000000109 Gtf3c3Q3TMP1 882 aa7.9□□□□□ -1.15
Cntn1-201ENSMUST00000000109 Podxl2Q8CAE9 603 aa7.9□□□□□ -1.15
Cntn1-201ENSMUST00000000109 Nolc1E9Q5C9 702 aaKnown RBP7.88□□□□□ -1.15
Cntn1-201ENSMUST00000000109 Hmgb1P63158 215 aaKnown RBP7.85□□□□□ -1.15
Cntn1-201ENSMUST00000000109 Scaf1Q5U4C3 1256 aaKnown RBP7.84□□□□□ -1.15
Cntn1-201ENSMUST00000000109 P3h3Q8CG70 732 aa7.84□□□□□ -1.15
Cntn1-201ENSMUST00000000109 Mrs2Q5NCE8 434 aa7.84□□□□□ -1.15
Cntn1-201ENSMUST00000000109 Clip1Q922J3 1391 aa7.81□□□□□ -1.16
Cntn1-201ENSMUST00000000109 CanxP35564 591 aaKnown RBP7.8□□□□□ -1.16
Cntn1-201ENSMUST00000000109 Plcd4Q8K3R3 807 aa7.8□□□□□ -1.16
Cntn1-201ENSMUST00000000109 Slc4a3P16283 1227 aa7.79□□□□□ -1.16
Cntn1-201ENSMUST00000000109 Il27Q8K3I6 234 aa7.77□□□□□ -1.17
Cntn1-201ENSMUST00000000109 Irx6Q9ER75 438 aa7.77□□□□□ -1.17
Cntn1-201ENSMUST00000000109 Brd2Q7JJ13 798 aaKnown RBP7.77□□□□□ -1.17
Cntn1-201ENSMUST00000000109 Ipo9Q91YE6 1041 aa7.76□□□□□ -1.17
Cntn1-201ENSMUST00000000109 Lmod2Q3UHZ5 550 aa7.75□□□□□ -1.17
Cntn1-201ENSMUST00000000109 4933402E13RikQ9D4D2 429 aa7.75□□□□□ -1.17
Cntn1-201ENSMUST00000000109 AU015836B2RUM3 263 aa7.74□□□□□ -1.17
Cntn1-201ENSMUST00000000109 Prdm16A2A935 1275 aa7.73□□□□□ -1.17
Cntn1-201ENSMUST00000000109 NacadQ5SWP3 1504 aa7.73□□□□□ -1.17
Cntn1-201ENSMUST00000000109 Rsf1E9PWW9 1441 aaKnown RBP7.73□□□□□ -1.17
Cntn1-201ENSMUST00000000109 Samd1D3YXK1 519 aa7.73□□□□□ -1.17
Cntn1-201ENSMUST00000000109 ScribQ80U72 1612 aa7.72□□□□□ -1.17
Cntn1-201ENSMUST00000000109 Tcerg1Q8CGF7 1100 aaKnown RBP7.72□□□□□ -1.17
Cntn1-201ENSMUST00000000109 Stard8Q8K031 1019 aa7.72□□□□□ -1.17
Cntn1-201ENSMUST00000000109 Ofd1Q80Z25 1017 aa7.7□□□□□ -1.18
Cntn1-201ENSMUST00000000109 BbxQ8VBW5 907 aa7.7□□□□□ -1.18
Cntn1-201ENSMUST00000000109 Ccer2J3QPU5 274 aa7.7□□□□□ -1.18
Cntn1-201ENSMUST00000000109 Gpatch11Q3UFS4 262 aa7.69□□□□□ -1.18
Cntn1-201ENSMUST00000000109 Hsp90b1P08113 802 aaKnown RBP7.69□□□□□ -1.18
Cntn1-201ENSMUST00000000109 PtmaP26350 111 aa7.69□□□□□ -1.18
Cntn1-201ENSMUST00000000109 Tshz2Q68FE9 1030 aa7.69□□□□□ -1.18
Cntn1-201ENSMUST00000000109 Rb1cc1Q9ESK9 1588 aa7.68□□□□□ -1.18
Cntn1-201ENSMUST00000000109 HomezQ80W88 542 aa7.68□□□□□ -1.18
Cntn1-201ENSMUST00000000109 Znf710Q3U288 666 aa7.68□□□□□ -1.18
Cntn1-201ENSMUST00000000109 Trim44Q9QXA7 346 aa7.67□□□□□ -1.18
Cntn1-201ENSMUST00000000109 Lmod3E9QA62 571 aa7.67□□□□□ -1.18
Cntn1-201ENSMUST00000000109 Rad21Q61550 635 aaKnown RBP7.67□□□□□ -1.18
Cntn1-201ENSMUST00000000109 Rtn4Q99P72 1162 aaKnown RBP7.67□□□□□ -1.18
Cntn1-201ENSMUST00000000109 Kdm5dQ62240 1548 aa7.66□□□□□ -1.18
Cntn1-201ENSMUST00000000109 Zbtb4Q5F293 982 aa7.66□□□□□ -1.18
Cntn1-201ENSMUST00000000109 Rbm10Q99KG3 930 aaKnown RBP7.66□□□□□ -1.18
Cntn1-201ENSMUST00000000109 Brd4Q9ESU6 1400 aaKnown RBP7.66□□□□□ -1.18
Cntn1-201ENSMUST00000000109 Gm13697A2AK42 830 aa7.65□□□□□ -1.18
Cntn1-201ENSMUST00000000109 Spryd3E9Q9B3 442 aa7.65□□□□□ -1.18
Cntn1-201ENSMUST00000000109 Hsp90ab1P11499 724 aaKnown RBP7.65□□□□□ -1.18
Cntn1-201ENSMUST00000000109 Ipo4Q8VI75 1082 aa7.65□□□□□ -1.18
Cntn1-201ENSMUST00000000109 ChgaP26339 463 aaKnown RBP7.65□□□□□ -1.19
Cntn1-201ENSMUST00000000109 Pak3Q61036 559 aa7.65□□□□□ -1.19
Cntn1-201ENSMUST00000000109 Ppm1gQ61074 542 aa7.65□□□□□ -1.19
Cntn1-201ENSMUST00000000109 DekQ7TNV0 380 aaKnown RBP7.65□□□□□ -1.19
Cntn1-201ENSMUST00000000109 Htatsf1Q8BGC0 757 aa7.65□□□□□ -1.19
Cntn1-201ENSMUST00000000109 Trim30dE9PWL0 497 aa7.65□□□□□ -1.19
Cntn1-201ENSMUST00000000109 Dnttip2Q8R2M2 758 aaKnown RBP7.64□□□□□ -1.19
Cntn1-201ENSMUST00000000109 Wwc2Q6NXJ0 1187 aa7.63□□□□□ -1.19
Cntn1-201ENSMUST00000000109 Zfp777B9EKF4 885 aa7.62□□□□□ -1.19
Cntn1-201ENSMUST00000000109 B4galnt3Q6L8S8 986 aa7.62□□□□□ -1.19
Cntn1-201ENSMUST00000000109 Dbr1Q923B1 550 aa7.61□□□□□ -1.19
Cntn1-201ENSMUST00000000109 ErmnQ5EBJ4 281 aa7.61□□□□□ -1.19
Cntn1-201ENSMUST00000000109 Dnai1Q8C0M8 701 aa7.6□□□□□ -1.19
Cntn1-201ENSMUST00000000109 Skap1Q3UUV5 355 aa7.6□□□□□ -1.19
Cntn1-201ENSMUST00000000109 Pdcl3Q8BVF2 240 aa7.6□□□□□ -1.19
Cntn1-201ENSMUST00000000109 Sparcl1P70663 650 aa7.6□□□□□ -1.19
Cntn1-201ENSMUST00000000109 Psmd1Q3TXS7 953 aa7.6□□□□□ -1.19
Cntn1-201ENSMUST00000000109 Ecm2Q5FW85 670 aa7.6□□□□□ -1.19
Cntn1-201ENSMUST00000000109 Sin3aQ60520 1274 aaKnown RBP7.59□□□□□ -1.19
Cntn1-201ENSMUST00000000109 Hspa5P20029 655 aaKnown RBP7.59□□□□□ -1.19
Cntn1-201ENSMUST00000000109 Vgll3P85442 326 aa7.59□□□□□ -1.19
Cntn1-201ENSMUST00000000109 BlmO88700 1416 aa7.58□□□□□ -1.2
Cntn1-201ENSMUST00000000109 Arid4aF8VPQ2 1261 aaKnown RBP7.58□□□□□ -1.2
Cntn1-201ENSMUST00000000109 AcrbpQ3V140 540 aa7.58□□□□□ -1.2
Cntn1-201ENSMUST00000000109 Golga3P55937 1487 aa7.58□□□□□ -1.2
Cntn1-201ENSMUST00000000109 Ccdc88bQ4QRL3 1481 aa7.58□□□□□ -1.2
Cntn1-201ENSMUST00000000109 Gtf3c6Q9D8P7 227 aa7.58□□□□□ -1.2
Cntn1-201ENSMUST00000000109 Polr3glQ8R0C0 218 aa7.57□□□□□ -1.2
Cntn1-201ENSMUST00000000109 Tnnt2P50752 301 aa7.57□□□□□ -1.2
Cntn1-201ENSMUST00000000109 Mak16Q8BGS0 296 aaKnown RBP7.57□□□□□ -1.2
Cntn1-201ENSMUST00000000109 Plcb2A3KGF7 1181 aa7.56□□□□□ -1.2
Cntn1-201ENSMUST00000000109 Fam43aQ8BUP8 424 aa7.56□□□□□ -1.2
Cntn1-201ENSMUST00000000109 Exoc6Q8R313 802 aa7.56□□□□□ -1.2
Cntn1-201ENSMUST00000000109 Chic2Q9D9G3 165 aa7.56□□□□□ -1.2
Cntn1-201ENSMUST00000000109 Rrp12Q6P5B0 1295 aaKnown RBP7.54□□□□□ -1.2
Cntn1-201ENSMUST00000000109 Washc2Q6PGL7 1334 aa7.54□□□□□ -1.2
Cntn1-201ENSMUST00000000109 Setd5Q5XJV7 1441 aa7.54□□□□□ -1.2
Cntn1-201ENSMUST00000000109 Smg6P61406 1418 aaKnown RBP7.53□□□□□ -1.2
Cntn1-201ENSMUST00000000109 Cers3Q1A3B0 383 aa7.53□□□□□ -1.2
Cntn1-201ENSMUST00000000109 Nlrp6Q91WS2 869 aa7.53□□□□□ -1.2
Cntn1-201ENSMUST00000000109 Chmp5Q9D7S9 219 aa7.53□□□□□ -1.2
Cntn1-201ENSMUST00000000109 Iqcf3Q9D498 203 aa7.53□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 89.8 ms