RNA–Protein interactions for RNA: ENSMUST00000000109.10

Cntn1-201, Transcript of Contactin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cntn1, Length 5,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1-201ENSMUST00000000109 Rpgrip1Q9EPQ2 1331 aa9.88□□□□□ -0.83
Cntn1-201ENSMUST00000000109 Rhox8Q6VSS7 320 aa9.76□□□□□ -0.85
Cntn1-201ENSMUST00000000109 Ube2uB1AUC4 352 aa9.72□□□□□ -0.85
Cntn1-201ENSMUST00000000109 DiexfQ8BTT6 772 aaKnown RBP9.71□□□□□ -0.85
Cntn1-201ENSMUST00000000109 Myt1Q8CFC2 1127 aa9.48□□□□□ -0.89
Cntn1-201ENSMUST00000000109 Amer1Q7TS75 1132 aa9.48□□□□□ -0.89
Cntn1-201ENSMUST00000000109 Ehmt2Q9Z148 1263 aaKnown RBP9.45□□□□□ -0.9
Cntn1-201ENSMUST00000000109 Las1lA2BE28 776 aaKnown RBP9.42□□□□□ -0.9
Cntn1-201ENSMUST00000000109 Ttbk1Q6PCN3 1308 aa9.41□□□□□ -0.9
Cntn1-201ENSMUST00000000109 CatipB9EKE5 520 aa9.36□□□□□ -0.91
Cntn1-201ENSMUST00000000109 Acin1Q9JIX8 1338 aaKnown RBP9.28□□□□□ -0.92
Cntn1-201ENSMUST00000000109 Pcgf6Q99NA9 353 aa9.2□□□□□ -0.94
Cntn1-201ENSMUST00000000109 Cngb1E1AZ71 1325 aa9.12□□□□□ -0.95
Cntn1-201ENSMUST00000000109 Zeb1Q64318 1117 aa9.07□□□□□ -0.96
Cntn1-201ENSMUST00000000109 CenpbP27790 599 aa9.05□□□□□ -0.96
Cntn1-201ENSMUST00000000109 Wdr66E9Q743 1299 aa8.95□□□□□ -0.98
Cntn1-201ENSMUST00000000109 Pelp1Q9DBD5 1123 aaKnown RBP8.95□□□□□ -0.98
Cntn1-201ENSMUST00000000109 Supt5hO55201 1082 aaKnown RBP8.93□□□□□ -0.98
Cntn1-201ENSMUST00000000109 ArxO35085 564 aa8.85□□□□□ -0.99
Cntn1-201ENSMUST00000000109 Neurod1Q60867 357 aa8.83□□□□□ -1
Cntn1-201ENSMUST00000000109 Ccdc180J3QNE4 1664 aa8.8□□□□□ -1
Cntn1-201ENSMUST00000000109 Ccdc136Q3TVA9 1136 aa8.78□□□□□ -1
Cntn1-201ENSMUST00000000109 NefmP08553 848 aa8.77□□□□□ -1.01
Cntn1-201ENSMUST00000000109 NischQ80TM9 1593 aa8.76□□□□□ -1.01
Cntn1-201ENSMUST00000000109 Cdk11bP24788 784 aaKnown RBP8.73□□□□□ -1.01
Cntn1-201ENSMUST00000000109 Trim41Q5NCC3 630 aa8.73□□□□□ -1.01
Cntn1-201ENSMUST00000000109 Bcl11aQ9QYE3 773 aa8.71□□□□□ -1.02
Cntn1-201ENSMUST00000000109 Plppr3Q7TPB0 716 aa8.7□□□□□ -1.02
Cntn1-201ENSMUST00000000109 HrcG5E8J6 738 aa8.69□□□□□ -1.02
Cntn1-201ENSMUST00000000109 Csrnp3P59055 597 aa8.65□□□□□ -1.02
Cntn1-201ENSMUST00000000109 Rtl1Q7M732 1744 aa8.65□□□□□ -1.02
Cntn1-201ENSMUST00000000109 Gab3Q8BSM5 595 aa8.65□□□□□ -1.02
Cntn1-201ENSMUST00000000109 Nop58Q6DFW4 536 aaKnown RBP8.65□□□□□ -1.02
Cntn1-201ENSMUST00000000109 1700123L14RikQ3V2K7 440 aa8.61□□□□□ -1.03
Cntn1-201ENSMUST00000000109 Anks4bQ8K3X6 423 aa8.61□□□□□ -1.03
Cntn1-201ENSMUST00000000109 BccipQ9CWI3 316 aa8.6□□□□□ -1.03
Cntn1-201ENSMUST00000000109 4930567H17RikQ3V0K5 233 aa8.6□□□□□ -1.03
Cntn1-201ENSMUST00000000109 Aplp2Q06335 707 aa8.56□□□□□ -1.04
Cntn1-201ENSMUST00000000109 Gm38655A0A286YDK6 273 aa8.55□□□□□ -1.04
Cntn1-201ENSMUST00000000109 Ppargc1bQ8VHJ7 1014 aa8.54□□□□□ -1.04
Cntn1-201ENSMUST00000000109 Gtf3c5Q8R2T8 520 aa8.53□□□□□ -1.04
Cntn1-201ENSMUST00000000109 Sall2Q9QX96 1004 aa8.52□□□□□ -1.04
Cntn1-201ENSMUST00000000109 Q8BT18 775 aa8.52□□□□□ -1.05
Cntn1-201ENSMUST00000000109 Tnnt3Q9QZ47 272 aa8.5□□□□□ -1.05
Cntn1-201ENSMUST00000000109 UbtfP25976 765 aaKnown RBP8.49□□□□□ -1.05
Cntn1-201ENSMUST00000000109 Dcaf1Q80TR8 1506 aa8.47□□□□□ -1.05
Cntn1-201ENSMUST00000000109 Mier1Q5UAK0 511 aa8.45□□□□□ -1.06
Cntn1-201ENSMUST00000000109 Stra8P70278 393 aa8.45□□□□□ -1.06
Cntn1-201ENSMUST00000000109 Rtl5Q5DTT4 599 aa8.43□□□□□ -1.06
Cntn1-201ENSMUST00000000109 Eif5bQ05D44 1216 aaKnown RBP8.4□□□□□ -1.06
Cntn1-201ENSMUST00000000109 ClspnQ80YR7 1315 aa8.38□□□□□ -1.07
Cntn1-201ENSMUST00000000109 Znf316Q6PGE4 1016 aa8.37□□□□□ -1.07
Cntn1-201ENSMUST00000000109 Pknox2Q8BG99 474 aa8.37□□□□□ -1.07
Cntn1-201ENSMUST00000000109 Slc24a1Q91WD8 1130 aa8.36□□□□□ -1.07
Cntn1-201ENSMUST00000000109 Anp32aO35381 247 aa8.36□□□□□ -1.07
Cntn1-201ENSMUST00000000109 Slc4a1apE9PX68 744 aa8.34□□□□□ -1.07
Cntn1-201ENSMUST00000000109 Myt1lP97500 1187 aa8.33□□□□□ -1.08
Cntn1-201ENSMUST00000000109 4933416C03RikQ3V063 378 aa8.33□□□□□ -1.08
Cntn1-201ENSMUST00000000109 Fam71e1A1L3C1 212 aa8.32□□□□□ -1.08
Cntn1-201ENSMUST00000000109 TimelessQ9R1X4 1197 aa8.32□□□□□ -1.08
Cntn1-201ENSMUST00000000109 Znf326O88291 580 aa8.32□□□□□ -1.08
Cntn1-201ENSMUST00000000109 TonslQ6NZL6 1363 aa8.31□□□□□ -1.08
Cntn1-201ENSMUST00000000109 Esf1Q3V1V3 845 aaKnown RBP8.3□□□□□ -1.08
Cntn1-201ENSMUST00000000109 Arid3aQ62431 601 aa8.3□□□□□ -1.08
Cntn1-201ENSMUST00000000109 PrkcshO08795 521 aa8.3□□□□□ -1.08
Cntn1-201ENSMUST00000000109 Mapk8ip2Q9ERE9 830 aa8.3□□□□□ -1.08
Cntn1-201ENSMUST00000000109 Abcc9P70170 1546 aa8.29□□□□□ -1.08
Cntn1-201ENSMUST00000000109 Vsig10D3YX43 558 aa8.26□□□□□ -1.09
Cntn1-201ENSMUST00000000109 NrdcQ8BHG1 1161 aa8.25□□□□□ -1.09
Cntn1-201ENSMUST00000000109 NclP09405 707 aaKnown RBP8.24□□□□□ -1.09
Cntn1-201ENSMUST00000000109 Npm2Q80W85 207 aa8.24□□□□□ -1.09
Cntn1-201ENSMUST00000000109 Ncbp3Q8BZR9 615 aaKnown RBP8.23□□□□□ -1.09
Cntn1-201ENSMUST00000000109 Abcc8B2RUS7 1588 aa8.21□□□□□ -1.09
Cntn1-201ENSMUST00000000109 Gm35339A0A140LHH9 1649 aa8.21□□□□□ -1.1
Cntn1-201ENSMUST00000000109 Anp32bQ9EST5 272 aaKnown RBP8.21□□□□□ -1.1
Cntn1-201ENSMUST00000000109 Aebp2Q9Z248 504 aaKnown RBP8.2□□□□□ -1.1
Cntn1-201ENSMUST00000000109 Ap3b1Q9Z1T1 1105 aa8.18□□□□□ -1.1
Cntn1-201ENSMUST00000000109 Ythdc1E9Q5K9 736 aaKnown RBP8.16□□□□□ -1.1
Cntn1-201ENSMUST00000000109 Rangap1P46061 589 aaKnown RBP8.16□□□□□ -1.1
Cntn1-201ENSMUST00000000109 SafbD3YXK2 937 aaKnown RBP8.14□□□□□ -1.11
Cntn1-201ENSMUST00000000109 Ripply1Q2WG77 201 aa8.14□□□□□ -1.11
Cntn1-201ENSMUST00000000109 DaxxO35613 739 aa8.14□□□□□ -1.11
Cntn1-201ENSMUST00000000109 Calr4Q3TQS0 420 aa8.12□□□□□ -1.11
Cntn1-201ENSMUST00000000109 Zbtb7cQ8VCZ7 619 aa8.12□□□□□ -1.11
Cntn1-201ENSMUST00000000109 Hnrnpul2Q00PI9 745 aaKnown RBP8.1□□□□□ -1.11
Cntn1-201ENSMUST00000000109 Taok2Q6ZQ29 1240 aa8.1□□□□□ -1.11
Cntn1-201ENSMUST00000000109 Ppp4r2Q0VGB7 417 aa8.1□□□□□ -1.11
Cntn1-201ENSMUST00000000109 Cep164Q5DU05 1446 aa8.09□□□□□ -1.11
Cntn1-201ENSMUST00000000109 Ccdc9Q8VC31 543 aaKnown RBP8.06□□□□□ -1.12
Cntn1-201ENSMUST00000000109 Fbxo3Q9DC63 480 aa8.06□□□□□ -1.12
Cntn1-201ENSMUST00000000109 Rsph4aQ8BYM7 716 aa8.05□□□□□ -1.12
Cntn1-201ENSMUST00000000109 Fgd1P52734 960 aa8.04□□□□□ -1.12
Cntn1-201ENSMUST00000000109 Wdr43Q6ZQL4 677 aaKnown RBP8.04□□□□□ -1.12
Cntn1-201ENSMUST00000000109 NeflP08551 543 aa8.03□□□□□ -1.12
Cntn1-201ENSMUST00000000109 Eid3Q3V124 375 aa8.03□□□□□ -1.12
Cntn1-201ENSMUST00000000109 Hsp90aa1P07901 733 aaKnown RBP8.02□□□□□ -1.12
Cntn1-201ENSMUST00000000109 Fam50aQ9WV03 339 aaKnown RBP8.01□□□□□ -1.13
Cntn1-201ENSMUST00000000109 Kcna4Q61423 654 aa8□□□□□ -1.13
Cntn1-201ENSMUST00000000109 Ifnlr1Q8CGK5 535 aa8□□□□□ -1.13
Cntn1-201ENSMUST00000000109 Ccdc27Q3V036 639 aa8□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 92 ms