RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN6	YDL097C	RPS6A	P0CX37	236 aa	Known RBP	4.72	□□□□□ -1.65
RPN6	YDL097C	RPS6B	P0CX38	236 aa	Predicted RBP	4.72	□□□□□ -1.65
RPN6	YDL097C	SSB1	P11484	613 aa	Known RBP	4.72	□□□□□ -1.65
RPN6	YDL097C	RPC53	P25441	422 aa		4.72	□□□□□ -1.65
RPN6	YDL097C	AMN1	P38285	549 aa	Predicted RBP	4.72	□□□□□ -1.65
RPN6	YDL097C	FAU1	P40099	211 aa		4.72	□□□□□ -1.65
RPN6	YDL097C	SSB2	P40150	613 aa	Known RBP	4.72	□□□□□ -1.65
RPN6	YDL097C	YJL070C	P40361	888 aa		4.72	□□□□□ -1.65
RPN6	YDL097C	PMT3	P47190	753 aa		4.72	□□□□□ -1.65
RPN6	YDL097C	PGA2	P53903	129 aa		4.72	□□□□□ -1.65
RPN6	YDL097C	WTM2	Q12206	467 aa		4.72	□□□□□ -1.65
RPN6	YDL097C	YDR215C	Q12240	137 aa		4.72	□□□□□ -1.65
RPN6	YDL097C	ASP3-2	P0CX77	362 aa		4.71	□□□□□ -1.66
RPN6	YDL097C	ASP3-3	P0CX78	362 aa		4.71	□□□□□ -1.66
RPN6	YDL097C	ASP3-4	P0CX79	362 aa		4.71	□□□□□ -1.66
RPN6	YDL097C	ASP3-1	P0CZ17	362 aa		4.71	□□□□□ -1.66
RPN6	YDL097C	MGE1	P38523	228 aa		4.71	□□□□□ -1.66
RPN6	YDL097C	UBP7	P40453	1071 aa		4.71	□□□□□ -1.66
RPN6	YDL097C	SER33	P40510	469 aa		4.71	□□□□□ -1.66
RPN6	YDL097C	UFE1	P41834	346 aa		4.71	□□□□□ -1.66
RPN6	YDL097C	SNO2	P53823	222 aa		4.71	□□□□□ -1.66
RPN6	YDL097C	YNL011C	P53980	444 aa		4.71	□□□□□ -1.66
RPN6	YDL097C	YPL113C	Q02961	396 aa		4.71	□□□□□ -1.66
RPN6	YDL097C	YLH47	Q06493	454 aa		4.71	□□□□□ -1.66
RPN6	YDL097C	RSB1	Q08417	382 aa		4.71	□□□□□ -1.66
RPN6	YDL097C	GPM1	P00950	247 aa	Known RBP	4.7	□□□□□ -1.66
RPN6	YDL097C	SWI5	P08153	709 aa		4.7	□□□□□ -1.66
RPN6	YDL097C	DAT1	P13483	248 aa	Known RBP	4.7	□□□□□ -1.66
RPN6	YDL097C	UTR2	P32623	467 aa		4.7	□□□□□ -1.66
RPN6	YDL097C	SGE1	P33335	543 aa		4.7	□□□□□ -1.66
RPN6	YDL097C	SEF1	P34228	1148 aa		4.7	□□□□□ -1.66
RPN6	YDL097C	AGP2	P38090	596 aa		4.7	□□□□□ -1.66
RPN6	YDL097C	YIL108W	P40483	696 aa	Known RBP	4.7	□□□□□ -1.66
RPN6	YDL097C	HLJ1	P48353	224 aa		4.7	□□□□□ -1.66
RPN6	YDL097C	RTN1	Q04947	295 aa	Known RBP	4.7	□□□□□ -1.66
RPN6	YDL097C	RTT10	Q08924	1013 aa		4.7	□□□□□ -1.66
RPN6	YDL097C	SGT2	Q12118	346 aa	Known RBP	4.7	□□□□□ -1.66
RPN6	YDL097C	GLE1	Q12315	538 aa		4.7	□□□□□ -1.66
RPN6	YDL097C	CDC16	P09798	840 aa		4.69	□□□□□ -1.66
RPN6	YDL097C	ARF2	P19146	181 aa	Known RBP	4.69	□□□□□ -1.66
RPN6	YDL097C	FPS1	P23900	669 aa		4.69	□□□□□ -1.66
RPN6	YDL097C	NAM7	P30771	971 aa	Known RBP	4.69	□□□□□ -1.66
RPN6	YDL097C	XRS2	P33301	854 aa		4.69	□□□□□ -1.66
RPN6	YDL097C	TFC3	P34111	1160 aa		4.69	□□□□□ -1.66
RPN6	YDL097C	TAT1	P38085	619 aa		4.69	□□□□□ -1.66
RPN6	YDL097C	ASN1	P49089	572 aa	Known RBP	4.69	□□□□□ -1.66
RPN6	YDL097C	ARK1	P53974	638 aa		4.69	□□□□□ -1.66
RPN6	YDL097C	NUP116	Q02630	1113 aa		4.69	□□□□□ -1.66
RPN6	YDL097C	TRS120	Q04183	1289 aa		4.69	□□□□□ -1.66
RPN6	YDL097C	POB3	Q04636	552 aa	Known RBP	4.69	□□□□□ -1.66
RPN6	YDL097C	YSH1	Q06224	779 aa	Predicted RBP	4.69	□□□□□ -1.66
RPN6	YDL097C	CDC9	P04819	755 aa		4.68	□□□□□ -1.66
RPN6	YDL097C	SPT15	P13393	240 aa	Known RBP	4.68	□□□□□ -1.66
RPN6	YDL097C	DSS4	P32601	143 aa		4.68	□□□□□ -1.66
RPN6	YDL097C	ISC10	P32645	267 aa		4.68	□□□□□ -1.66
RPN6	YDL097C	KDX1	P36005	433 aa		4.68	□□□□□ -1.66
RPN6	YDL097C	YBR197C	P38306	217 aa		4.68	□□□□□ -1.66
RPN6	YDL097C	RRP3	P38712	501 aa	Known RBP	4.68	□□□□□ -1.66
RPN6	YDL097C	ASG7	P46993	209 aa		4.68	□□□□□ -1.66
RPN6	YDL097C	YGL138C	P53122	345 aa		4.68	□□□□□ -1.66
RPN6	YDL097C	ARP4	P80428	489 aa		4.68	□□□□□ -1.66
RPN6	YDL097C	CDA1	Q06702	301 aa		4.68	□□□□□ -1.66
RPN6	YDL097C	CLP1	Q08685	445 aa	Predicted RBP	4.68	□□□□□ -1.66
RPN6	YDL097C	SEC63	P14906	663 aa		4.67	□□□□□ -1.66
RPN6	YDL097C	AKR1	P39010	764 aa		4.67	□□□□□ -1.66
RPN6	YDL097C	FHL1	P39521	936 aa		4.67	□□□□□ -1.66
RPN6	YDL097C	ELO1	P39540	310 aa		4.67	□□□□□ -1.66
RPN6	YDL097C	PCI8	P40512	444 aa		4.67	□□□□□ -1.66
RPN6	YDL097C	ALA1	P40825	983 aa	Known RBP	4.67	□□□□□ -1.66
RPN6	YDL097C	GUF1	P46943	645 aa		4.67	□□□□□ -1.66
RPN6	YDL097C	IKS1	P47042	667 aa		4.67	□□□□□ -1.66
RPN6	YDL097C	YGL140C	P53120	1219 aa		4.67	□□□□□ -1.66
RPN6	YDL097C	RET3	P53600	189 aa		4.67	□□□□□ -1.66
RPN6	YDL097C	ESC2	Q06340	456 aa		4.67	□□□□□ -1.66
RPN6	YDL097C	PGA3	Q12746	312 aa	Known RBP	4.67	□□□□□ -1.66
RPN6	YDL097C	POL30	P15873	258 aa	Known RBP	4.66	□□□□□ -1.66
RPN6	YDL097C	PEP3	P27801	918 aa		4.66	□□□□□ -1.66
RPN6	YDL097C	HSP78	P33416	811 aa		4.66	□□□□□ -1.66
RPN6	YDL097C	PXA2	P34230	853 aa		4.66	□□□□□ -1.66
RPN6	YDL097C	PGM2	P37012	569 aa	Known RBP	4.66	□□□□□ -1.66
RPN6	YDL097C	CIC1	P38779	376 aa	Known RBP	4.66	□□□□□ -1.66
RPN6	YDL097C	PSY2	P40164	858 aa		4.66	□□□□□ -1.66
RPN6	YDL097C	SET2	P46995	733 aa	Known RBP	4.66	□□□□□ -1.66
RPN6	YDL097C	MUB1	Q03162	620 aa		4.66	□□□□□ -1.66
RPN6	YDL097C	VID22	Q05934	901 aa		4.66	□□□□□ -1.66
RPN6	YDL097C	RIM20	Q12033	661 aa		4.66	□□□□□ -1.66
RPN6	YDL097C	SRO7	Q12038	1033 aa		4.66	□□□□□ -1.66
RPN6	YDL097C	SMC6	Q12749	1114 aa		4.66	□□□□□ -1.66
RPN6	YDL097C	Q0182	Q9ZZW1	134 aa		4.66	□□□□□ -1.66
RPN6	YDL097C	RPB10	P22139	70 aa		4.65	□□□□□ -1.67
RPN6	YDL097C	SWI4	P25302	1093 aa	Known RBP	4.65	□□□□□ -1.67
RPN6	YDL097C	ATG15	P25641	520 aa		4.65	□□□□□ -1.67
RPN6	YDL097C	FRE1	P32791	686 aa		4.65	□□□□□ -1.67
RPN6	YDL097C	YSC83	P32792	385 aa		4.65	□□□□□ -1.67
RPN6	YDL097C	PIH1	P38768	344 aa		4.65	□□□□□ -1.67
RPN6	YDL097C	VPS27	P40343	622 aa	Known RBP	4.65	□□□□□ -1.67
RPN6	YDL097C	CFD1	P40558	293 aa		4.65	□□□□□ -1.67
RPN6	YDL097C	UTP14	Q04500	899 aa	Known RBP	4.65	□□□□□ -1.67
RPN6	YDL097C	SLK19	Q08581	821 aa	Known RBP	4.65	□□□□□ -1.67
RPN6	YDL097C	THR4	P16120	514 aa	Known RBP	4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms