RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W ARR1Q06596 294 aa2.43□□□□□ -2.02
MCD1YDL003W RUD3Q12234 484 aaKnown RBP2.43□□□□□ -2.02
MCD1YDL003W SES1P07284 462 aaKnown RBP2.42□□□□□ -2.02
MCD1YDL003W TSR4P25040 408 aa2.42□□□□□ -2.02
MCD1YDL003W MRPL10P36520 322 aa2.42□□□□□ -2.02
MCD1YDL003W SPT8P38915 602 aa2.42□□□□□ -2.02
MCD1YDL003W PET100P38958 111 aa2.42□□□□□ -2.02
MCD1YDL003W CCT4P39078 528 aaKnown RBP2.42□□□□□ -2.02
MCD1YDL003W PEA2P40091 420 aa2.42□□□□□ -2.02
MCD1YDL003W YIL077CP40508 320 aa2.42□□□□□ -2.02
MCD1YDL003W TY4A-JP47023 414 aa2.42□□□□□ -2.02
MCD1YDL003W RFX1P48743 811 aa2.42□□□□□ -2.02
MCD1YDL003W SCW4P53334 386 aaKnown RBP2.42□□□□□ -2.02
MCD1YDL003W DSL1P53847 754 aa2.42□□□□□ -2.02
MCD1YDL003W YDR179W-AQ03983 463 aa2.42□□□□□ -2.02
MCD1YDL003W VMS1Q04311 632 aaKnown RBP2.42□□□□□ -2.02
MCD1YDL003W EIS1Q05050 843 aaKnown RBP2.42□□□□□ -2.02
MCD1YDL003W IMH1Q06704 911 aaKnown RBP2.42□□□□□ -2.02
MCD1YDL003W BUD21Q08492 214 aaPredicted RBP2.42□□□□□ -2.02
MCD1YDL003W YPL225WQ08971 146 aaKnown RBP2.42□□□□□ -2.02
MCD1YDL003W HIR3P47171 1648 aa2.42□□□□□ -2.02
MCD1YDL003W SSK2P53599 1579 aa2.42□□□□□ -2.02
MCD1YDL003W GCN2P15442 1659 aa2.42□□□□□ -2.02
MCD1YDL003W RNR2P09938 399 aaKnown RBP2.42□□□□□ -2.02
MCD1YDL003W THR4P16120 514 aaKnown RBP2.42□□□□□ -2.02
MCD1YDL003W DPH5P32469 300 aaPredicted RBP2.42□□□□□ -2.02
MCD1YDL003W YME2P32843 850 aa2.42□□□□□ -2.02
MCD1YDL003W TAF5P38129 798 aa2.42□□□□□ -2.02
MCD1YDL003W OLA1P38219 394 aaKnown RBP2.42□□□□□ -2.02
MCD1YDL003W RIM4P38741 713 aa2.42□□□□□ -2.02
MCD1YDL003W SPC97P38863 823 aa2.42□□□□□ -2.02
MCD1YDL003W JHD1P40034 492 aa2.42□□□□□ -2.02
MCD1YDL003W SEC9P40357 651 aa2.42□□□□□ -2.02
MCD1YDL003W THI6P41835 540 aa2.42□□□□□ -2.02
MCD1YDL003W SET2P46995 733 aaKnown RBP2.42□□□□□ -2.02
MCD1YDL003W BTN2P53286 410 aa2.42□□□□□ -2.02
MCD1YDL003W YOR1P53049 1477 aa2.42□□□□□ -2.02
MCD1YDL003W NUP145P49687 1317 aa2.41□□□□□ -2.02
MCD1YDL003W PDR5P33302 1511 aaKnown RBP2.41□□□□□ -2.02
MCD1YDL003W ERG20P08524 352 aaKnown RBP2.41□□□□□ -2.02
MCD1YDL003W TUP1P16649 713 aa2.41□□□□□ -2.02
MCD1YDL003W BRF1P29056 596 aa2.41□□□□□ -2.02
MCD1YDL003W SWC3P31376 625 aa2.41□□□□□ -2.02
MCD1YDL003W STO1P34160 861 aaKnown RBP2.41□□□□□ -2.02
MCD1YDL003W TIF3P34167 436 aaKnown RBP2.41□□□□□ -2.02
MCD1YDL003W DID4P36108 232 aa2.41□□□□□ -2.02
MCD1YDL003W RPC37P36121 282 aa2.41□□□□□ -2.02
MCD1YDL003W APN2P38207 520 aa2.41□□□□□ -2.02
MCD1YDL003W RTR1P40084 226 aaPredicted RBP2.41□□□□□ -2.02
MCD1YDL003W GID8P40208 455 aa2.41□□□□□ -2.02
MCD1YDL003W IAH1P41734 238 aa2.41□□□□□ -2.02
MCD1YDL003W SNO3P43544 222 aa2.41□□□□□ -2.02
MCD1YDL003W ILM1P47155 203 aa2.41□□□□□ -2.02
MCD1YDL003W SHE4P51534 789 aa2.41□□□□□ -2.02
MCD1YDL003W PIP2P52960 996 aa2.41□□□□□ -2.02
MCD1YDL003W PEX14P53112 341 aa2.41□□□□□ -2.02
MCD1YDL003W HUL5P53119 910 aa2.41□□□□□ -2.02
MCD1YDL003W LSC1P53598 329 aaKnown RBP2.41□□□□□ -2.02
MCD1YDL003W CPR8P53728 308 aa2.41□□□□□ -2.02
MCD1YDL003W DAK1P54838 584 aaKnown RBP2.41□□□□□ -2.02
MCD1YDL003W DNM1P54861 757 aa2.41□□□□□ -2.02
MCD1YDL003W RRB1Q04225 511 aaKnown RBP2.41□□□□□ -2.02
MCD1YDL003W RBA50Q04418 439 aa2.41□□□□□ -2.02
MCD1YDL003W GGA1Q06336 557 aa2.41□□□□□ -2.02
MCD1YDL003W NKP1Q12493 238 aa2.41□□□□□ -2.02
MCD1YDL003W YKL068W-AQ3E826 78 aa2.41□□□□□ -2.02
MCD1YDL003W VPS15P22219 1454 aa2.41□□□□□ -2.02
MCD1YDL003W RKR1Q04781 1562 aa2.41□□□□□ -2.02
MCD1YDL003W SWI1P09547 1314 aa2.4□□□□□ -2.02
MCD1YDL003W YCF1P39109 1515 aaKnown RBP2.4□□□□□ -2.02
MCD1YDL003W CAN1P04817 590 aa2.4□□□□□ -2.02
MCD1YDL003W SUP35P05453 685 aaKnown RBP2.4□□□□□ -2.02
MCD1YDL003W SWI6P09959 803 aa2.4□□□□□ -2.02
MCD1YDL003W CLB4P24871 460 aa2.4□□□□□ -2.02
MCD1YDL003W ECM32P32644 1121 aaKnown RBP2.4□□□□□ -2.02
MCD1YDL003W YEL1P34225 687 aa2.4□□□□□ -2.02
MCD1YDL003W MTC2P34246 357 aa2.4□□□□□ -2.02
MCD1YDL003W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.4□□□□□ -2.02not detected
MCD1YDL003W MPE1P35728 441 aaKnown RBP2.4□□□□□ -2.02
MCD1YDL003W PXL1P36166 706 aa2.4□□□□□ -2.02
MCD1YDL003W HSL7P38274 827 aa2.4□□□□□ -2.02
MCD1YDL003W CIR1P42940 261 aa2.4□□□□□ -2.02
MCD1YDL003W OSW7P43611 510 aa2.4□□□□□ -2.02
MCD1YDL003W NMD5P46970 1048 aa2.4□□□□□ -2.02
MCD1YDL003W RTA1P53047 317 aa2.4□□□□□ -2.02
MCD1YDL003W YGL117WP53133 265 aa2.4□□□□□ -2.02
MCD1YDL003W LSG1P53145 640 aaKnown RBP2.4□□□□□ -2.02
MCD1YDL003W ESF2P53743 316 aaKnown RBP2.4□□□□□ -2.02
MCD1YDL003W IST1P53843 298 aaPredicted RBP2.4□□□□□ -2.02
MCD1YDL003W RCF1Q03713 159 aa2.4□□□□□ -2.02
MCD1YDL003W ARO80Q04052 950 aa2.4□□□□□ -2.02
MCD1YDL003W ENT2Q05785 613 aa2.4□□□□□ -2.02
MCD1YDL003W NFI1Q12216 726 aa2.4□□□□□ -2.02
MCD1YDL003W FRE7Q12333 620 aa2.4□□□□□ -2.02
MCD1YDL003W POM34Q12445 299 aa2.4□□□□□ -2.02
MCD1YDL003W DNF1P32660 1571 aa2.4□□□□□ -2.03
MCD1YDL003W KOG1P38873 1557 aa2.4□□□□□ -2.03
MCD1YDL003W GEA2P39993 1459 aaKnown RBP2.4□□□□□ -2.03
MCD1YDL003W ESP1Q03018 1630 aa2.4□□□□□ -2.03
MCD1YDL003W TY1B-AO13527 1196 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms