RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W NOP13P53883 403 aaKnown RBP RIP-Chip data8.24□□□□□ -1.09not detected
SHC1YER096W YNL011CP53980 444 aa8.24□□□□□ -1.09
SHC1YER096W ELP3Q02908 557 aaKnown RBP8.24□□□□□ -1.09
SHC1YER096W NUR1Q12066 484 aa8.24□□□□□ -1.09
SHC1YER096W PKH2Q12236 1081 aaKnown RBP8.24□□□□□ -1.09
SHC1YER096W GAL80P04387 435 aa8.23□□□□□ -1.09
SHC1YER096W TIF1P10081 395 aaKnown RBP8.23□□□□□ -1.09
SHC1YER096W SDH2P21801 266 aa8.23□□□□□ -1.09
SHC1YER096W CNS1P33313 385 aa8.23□□□□□ -1.09
SHC1YER096W NOP4P37838 685 aaKnown RBP8.23□□□□□ -1.09
SHC1YER096W PBP2P38151 413 aaKnown RBP RIP-Chip data8.23□□□□□ -1.09not detected
SHC1YER096W POA1P38218 177 aa8.23□□□□□ -1.09
SHC1YER096W APM2P38700 605 aa8.23□□□□□ -1.09
SHC1YER096W KHA1P40309 873 aa8.23□□□□□ -1.09
SHC1YER096W MKT1P40850 830 aaKnown RBP8.23□□□□□ -1.09
SHC1YER096W OPT1P40897 799 aa8.23□□□□□ -1.09
SHC1YER096W PUF3Q07807 879 aaKnown RBP RIP-Chip data8.23□□□□□ -1.09not detected
SHC1YER096W MDM38Q08179 573 aa8.23□□□□□ -1.09
SHC1YER096W REC8Q12188 680 aa8.23□□□□□ -1.09
SHC1YER096W SFL1P20134 766 aa8.22□□□□□ -1.09
SHC1YER096W ADK2P26364 225 aa8.22□□□□□ -1.09
SHC1YER096W BIO2P32451 375 aa8.22□□□□□ -1.09
SHC1YER096W SLA2P33338 968 aa8.22□□□□□ -1.09
SHC1YER096W LTV1P34078 463 aa8.22□□□□□ -1.09
SHC1YER096W PMC1P38929 1173 aaPredicted RBP8.22□□□□□ -1.09
SHC1YER096W XDJ1P39102 459 aa8.22□□□□□ -1.09
SHC1YER096W ATG36P46983 293 aa8.22□□□□□ -1.09
SHC1YER096W ALY2P47029 1046 aa8.22□□□□□ -1.09
SHC1YER096W HOP2P53187 214 aa8.22□□□□□ -1.09
SHC1YER096W MTG1Q03151 367 aaPredicted RBP8.22□□□□□ -1.09
SHC1YER096W TIF35Q04067 274 aaKnown RBP8.22□□□□□ -1.09
SHC1YER096W ERV41Q04651 352 aa8.22□□□□□ -1.09
SHC1YER096W IVY1Q04934 453 aa8.22□□□□□ -1.09
SHC1YER096W YKL068W-AQ3E826 78 aa8.22□□□□□ -1.09
SHC1YER096W JIP3O13555 125 aa8.21□□□□□ -1.1
SHC1YER096W PUT4P15380 627 aa8.21□□□□□ -1.1
SHC1YER096W TRX1P22217 103 aaKnown RBP8.21□□□□□ -1.1
SHC1YER096W GAC1P28006 793 aa8.21□□□□□ -1.1
SHC1YER096W SEC1P30619 724 aaKnown RBP8.21□□□□□ -1.1
SHC1YER096W SRB2P34162 210 aa8.21□□□□□ -1.1
SHC1YER096W GCS1P35197 352 aa8.21□□□□□ -1.1
SHC1YER096W YBR284WP38150 797 aa8.21□□□□□ -1.1
SHC1YER096W SIF2P38262 535 aa8.21□□□□□ -1.1
SHC1YER096W MSG5P38590 489 aa8.21□□□□□ -1.1
SHC1YER096W SAP1P39955 897 aaKnown RBP8.21□□□□□ -1.1
SHC1YER096W AVT2P39981 480 aa8.21□□□□□ -1.1
SHC1YER096W FIR1P40020 876 aa8.21□□□□□ -1.1
SHC1YER096W SPO74P45819 413 aa8.21□□□□□ -1.1
SHC1YER096W YJL045WP47052 634 aa8.21□□□□□ -1.1
SHC1YER096W ESC8Q08119 714 aa8.21□□□□□ -1.1
SHC1YER096W AIM39Q08223 395 aa8.21□□□□□ -1.1
SHC1YER096W ACM1Q08981 209 aa8.21□□□□□ -1.1
SHC1YER096W YRR1Q12172 810 aa8.21□□□□□ -1.1
SHC1YER096W HIP1P06775 603 aa8.2□□□□□ -1.1
SHC1YER096W VPS3P23643 1011 aa8.2□□□□□ -1.1
SHC1YER096W ECM32P32644 1121 aaKnown RBP8.2□□□□□ -1.1
SHC1YER096W CCL1P37366 393 aa8.2□□□□□ -1.1
SHC1YER096W NMD3P38861 518 aaKnown RBP8.2□□□□□ -1.1
SHC1YER096W YPL062WQ02781 134 aa8.2□□□□□ -1.1
SHC1YER096W FMP30Q02883 468 aa8.2□□□□□ -1.1
SHC1YER096W HAP2P06774 265 aa8.19□□□□□ -1.1
SHC1YER096W LRE1P25579 583 aaKnown RBP8.19□□□□□ -1.1
SHC1YER096W LAS1P36146 502 aaPredicted RBP8.19□□□□□ -1.1
SHC1YER096W YBR056WP38081 501 aa8.19□□□□□ -1.1
SHC1YER096W ECM2P38241 364 aaKnown RBP8.19□□□□□ -1.1
SHC1YER096W SWC5P38326 303 aa8.19□□□□□ -1.1
SHC1YER096W TIF5P38431 405 aaKnown RBP8.19□□□□□ -1.1
SHC1YER096W RIM4P38741 713 aa8.19□□□□□ -1.1
SHC1YER096W YHR202WP38887 602 aa8.19□□□□□ -1.1
SHC1YER096W TMA108P40462 946 aa8.19□□□□□ -1.1
SHC1YER096W MVP1P40959 511 aaKnown RBP8.19□□□□□ -1.1
SHC1YER096W RSM26P47141 266 aa8.19□□□□□ -1.1
SHC1YER096W PNG1Q02890 363 aa8.19□□□□□ -1.1
SHC1YER096W SXM1Q04175 944 aaKnown RBP8.19□□□□□ -1.1
SHC1YER096W KAP95Q06142 861 aaKnown RBP8.19□□□□□ -1.1
SHC1YER096W RCL1Q08096 367 aaPredicted RBP8.19□□□□□ -1.1
SHC1YER096W CDC8P00572 216 aa8.19□□□□□ -1.1
SHC1YER096W AEP2P22136 580 aa8.19□□□□□ -1.1
SHC1YER096W HXT3P32466 567 aaKnown RBP8.19□□□□□ -1.1
SHC1YER096W PEP7P32609 515 aa8.19□□□□□ -1.1
SHC1YER096W RFS1P38234 210 aaKnown RBP8.19□□□□□ -1.1
SHC1YER096W HSL7P38274 827 aa8.19□□□□□ -1.1
SHC1YER096W PCA1P38360 1216 aa8.19□□□□□ -1.1
SHC1YER096W PCM1P38628 557 aaKnown RBP8.19□□□□□ -1.1
SHC1YER096W SAW1P39735 261 aa8.19□□□□□ -1.1
SHC1YER096W PRK1P40494 810 aa8.19□□□□□ -1.1
SHC1YER096W YIL054WP40524 105 aa8.19□□□□□ -1.1
SHC1YER096W PFD1P46988 109 aa8.19□□□□□ -1.1
SHC1YER096W INP52P50942 1183 aa8.19□□□□□ -1.1
SHC1YER096W CDC55Q00362 526 aa8.19□□□□□ -1.1
SHC1YER096W UTP6Q02354 440 aaKnown RBP8.19□□□□□ -1.1
SHC1YER096W APL5Q08951 932 aaKnown RBP8.19□□□□□ -1.1
SHC1YER096W YDR018CQ12185 396 aa8.19□□□□□ -1.1
SHC1YER096W APM4Q99186 491 aa8.19□□□□□ -1.1
SHC1YER096W YCR015CP25616 317 aa8.18□□□□□ -1.1
SHC1YER096W HMT1P38074 348 aa8.18□□□□□ -1.1
SHC1YER096W YEL023CP39992 682 aa8.18□□□□□ -1.1
SHC1YER096W YMR134WP40207 237 aa8.18□□□□□ -1.1
SHC1YER096W YGR283CP53336 341 aaPredicted RBP8.18□□□□□ -1.1
SHC1YER096W YNL040WP53960 456 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 123.2 ms