RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C BIT61P47041 543 aa3.77□□□□□ -1.81
SNU56YDR240C MPS3P47069 682 aa3.77□□□□□ -1.81
SNU56YDR240C YSH1Q06224 779 aaPredicted RBP3.77□□□□□ -1.81
SNU56YDR240C YDL086WQ07505 273 aa3.77□□□□□ -1.81
SNU56YDR240C NOP14Q99207 810 aaKnown RBP3.77□□□□□ -1.81
SNU56YDR240C FRS1P15624 595 aaKnown RBP3.76□□□□□ -1.81
SNU56YDR240C SFP1P32432 683 aa3.76□□□□□ -1.81
SNU56YDR240C BFA1P47113 574 aa3.76□□□□□ -1.81
SNU56YDR240C UTP14Q04500 899 aaKnown RBP3.76□□□□□ -1.81
SNU56YDR240C VBA4Q04602 768 aaKnown RBP3.76□□□□□ -1.81
SNU56YDR240C PRP22P24384 1145 aaKnown RBP3.75□□□□□ -1.81
SNU56YDR240C PPG1P32838 368 aa3.75□□□□□ -1.81
SNU56YDR240C APL3P38065 1025 aa3.75□□□□□ -1.81
SNU56YDR240C KSP1P38691 1029 aaKnown RBP3.75□□□□□ -1.81
SNU56YDR240C KHA1P40309 873 aa3.75□□□□□ -1.81
SNU56YDR240C RET2P43621 546 aa3.75□□□□□ -1.81
SNU56YDR240C RFX1P48743 811 aa3.75□□□□□ -1.81
SNU56YDR240C RNH70P53331 553 aa3.75□□□□□ -1.81
SNU56YDR240C HOF1Q05080 669 aa3.75□□□□□ -1.81
SNU56YDR240C YFT2Q06676 274 aa3.75□□□□□ -1.81
SNU56YDR240C VPS36Q06696 566 aa3.75□□□□□ -1.81
SNU56YDR240C RPL8AP17076 256 aaKnown RBP3.74□□□□□ -1.81
SNU56YDR240C VPS34P22543 875 aa3.74□□□□□ -1.81
SNU56YDR240C IMG2P25642 146 aaPredicted RBP3.74□□□□□ -1.81
SNU56YDR240C ORC2P32833 620 aa3.74□□□□□ -1.81
SNU56YDR240C COS111P38308 924 aa3.74□□□□□ -1.81
SNU56YDR240C YIL077CP40508 320 aa3.74□□□□□ -1.81
SNU56YDR240C SDA1P53313 767 aaKnown RBP3.74□□□□□ -1.81
SNU56YDR240C SPC98P53540 846 aa3.74□□□□□ -1.81
SNU56YDR240C YMR210WQ03649 449 aa3.74□□□□□ -1.81
SNU56YDR240C PPN1Q04119 674 aa3.74□□□□□ -1.81
SNU56YDR240C MRI1Q06489 411 aaKnown RBP3.74□□□□□ -1.81
SNU56YDR240C MSS1P32559 526 aaPredicted RBP3.73□□□□□ -1.81
SNU56YDR240C YKU70P32807 602 aa3.73□□□□□ -1.81
SNU56YDR240C YMC2P38087 329 aa3.73□□□□□ -1.81
SNU56YDR240C NMD2P38798 1089 aaKnown RBP3.73□□□□□ -1.81
SNU56YDR240C CKB2P38930 258 aa3.73□□□□□ -1.81
SNU56YDR240C YLR407WQ06070 228 aa3.73□□□□□ -1.81
SNU56YDR240C SLK19Q08581 821 aaKnown RBP3.73□□□□□ -1.81
SNU56YDR240C AFT2Q08957 416 aa3.73□□□□□ -1.81
SNU56YDR240C RKI1Q12189 258 aa3.73□□□□□ -1.81
SNU56YDR240C RPS9BP05755 195 aaKnown RBP3.73□□□□□ -1.81
SNU56YDR240C SWI6P09959 803 aa3.73□□□□□ -1.81
SNU56YDR240C TDA3P38758 523 aa3.73□□□□□ -1.81
SNU56YDR240C YHR097CP38809 366 aaKnown RBP3.73□□□□□ -1.81
SNU56YDR240C MNN1P39106 762 aa3.73□□□□□ -1.81
SNU56YDR240C MIT1P40002 666 aa3.73□□□□□ -1.81
SNU56YDR240C SPO1P53541 631 aa3.73□□□□□ -1.81
SNU56YDR240C UFO1Q04511 668 aa3.73□□□□□ -1.81
SNU56YDR240C THI7Q05998 598 aa3.73□□□□□ -1.81
SNU56YDR240C LAM4P38800 1345 aa3.72□□□□□ -1.81
SNU56YDR240C PHO5P00635 467 aa3.72□□□□□ -1.81
SNU56YDR240C HOM2P13663 365 aaKnown RBP3.72□□□□□ -1.81
SNU56YDR240C IME1P21190 360 aa3.72□□□□□ -1.81
SNU56YDR240C PXA1P41909 870 aa3.72□□□□□ -1.81
SNU56YDR240C PMT6P42934 759 aa3.72□□□□□ -1.81
SNU56YDR240C NGL2Q03264 515 aaKnown RBP3.72□□□□□ -1.81
SNU56YDR240C IZH3Q07959 543 aa3.72□□□□□ -1.81
SNU56YDR240C TPK2P06245 380 aa3.71□□□□□ -1.82
SNU56YDR240C RPA135P22138 1203 aaKnown RBP3.71□□□□□ -1.82
SNU56YDR240C SAT4P25333 603 aaKnown RBP3.71□□□□□ -1.82
SNU56YDR240C UGP1P32861 499 aaKnown RBP3.71□□□□□ -1.82
SNU56YDR240C YJR096WP47137 282 aa3.71□□□□□ -1.82
SNU56YDR240C NMA2P53204 395 aa3.71□□□□□ -1.82
SNU56YDR240C SNF12P53628 566 aa3.71□□□□□ -1.82
SNU56YDR240C DAK1P54838 584 aaKnown RBP3.71□□□□□ -1.82
SNU56YDR240C RCR2Q03446 210 aaKnown RBP3.71□□□□□ -1.82
SNU56YDR240C YDR179W-AQ03983 463 aa3.71□□□□□ -1.82
SNU56YDR240C OSW1Q08692 278 aa3.71□□□□□ -1.82
SNU56YDR240C CCT5P40413 562 aaKnown RBP3.7□□□□□ -1.82
SNU56YDR240C DIP5P53388 608 aa3.7□□□□□ -1.82
SNU56YDR240C FDC1Q03034 503 aa3.7□□□□□ -1.82
SNU56YDR240C NSE5Q03718 556 aa3.7□□□□□ -1.82
SNU56YDR240C SEG1Q04279 960 aa3.7□□□□□ -1.82
SNU56YDR240C HLR1Q04429 423 aa3.7□□□□□ -1.82
SNU56YDR240C YPS7Q06325 596 aa3.7□□□□□ -1.82
SNU56YDR240C ICT1Q12385 394 aa3.7□□□□□ -1.82
SNU56YDR240C MDM20Q12387 796 aaKnown RBP3.7□□□□□ -1.82
SNU56YDR240C RPS17AP02407 136 aaKnown RBP3.69□□□□□ -1.82
SNU56YDR240C STE12P13574 688 aa3.69□□□□□ -1.82
SNU56YDR240C RPS17BP14127 136 aaKnown RBP3.69□□□□□ -1.82
SNU56YDR240C MDM10P18409 493 aa3.69□□□□□ -1.82
SNU56YDR240C PMC1P38929 1173 aaPredicted RBP3.69□□□□□ -1.82
SNU56YDR240C BUD8P41698 603 aa3.69□□□□□ -1.82
SNU56YDR240C GZF3P42944 551 aaKnown RBP3.69□□□□□ -1.82
SNU56YDR240C YGR153WP48238 217 aa3.69□□□□□ -1.82
SNU56YDR240C ASN1P49089 572 aaKnown RBP3.69□□□□□ -1.82
SNU56YDR240C CEF1Q03654 590 aaPredicted RBP3.69□□□□□ -1.82
SNU56YDR240C ADE5,7P07244 802 aaKnown RBP3.68□□□□□ -1.82
SNU56YDR240C PRP19P32523 503 aaKnown RBP3.68□□□□□ -1.82
SNU56YDR240C LTP1P40347 161 aa3.68□□□□□ -1.82
SNU56YDR240C HLJ1P48353 224 aa3.68□□□□□ -1.82
SNU56YDR240C NOP15P53927 220 aaPredicted RBP3.68□□□□□ -1.82
SNU56YDR240C RIM13Q03792 727 aa3.68□□□□□ -1.82
SNU56YDR240C STP4Q07351 490 aa3.68□□□□□ -1.82
SNU56YDR240C ULA1Q12059 462 aa3.68□□□□□ -1.82
SNU56YDR240C APM4Q99186 491 aa3.68□□□□□ -1.82
SNU56YDR240C ADR1P07248 1323 aa3.68□□□□□ -1.82
SNU56YDR240C ELF1P36053 145 aa3.67□□□□□ -1.82
SNU56YDR240C THI6P41835 540 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms