RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W HTS1P07263 546 aaKnown RBP3.48□□□□□ -1.85
MSH2YOL090W MTF2P10849 440 aa3.48□□□□□ -1.85
MSH2YOL090W FUS1P11710 512 aa3.48□□□□□ -1.85
MSH2YOL090W PGS1P25578 521 aa3.48□□□□□ -1.85
MSH2YOL090W ERG3P32353 365 aa3.48□□□□□ -1.85
MSH2YOL090W YRO2P38079 344 aa3.48□□□□□ -1.85
MSH2YOL090W TDA3P38758 523 aa3.48□□□□□ -1.85
MSH2YOL090W SET2P46995 733 aaKnown RBP3.48□□□□□ -1.85
MSH2YOL090W UTP22P53254 1237 aaPredicted RBP3.48□□□□□ -1.85
MSH2YOL090W TIM11P81449 96 aaPredicted RBP3.48□□□□□ -1.85
MSH2YOL090W HOT1Q03213 719 aa3.48□□□□□ -1.85
MSH2YOL090W VID22Q05934 901 aa3.48□□□□□ -1.85
MSH2YOL090W SPP382Q06411 708 aaPredicted RBP3.48□□□□□ -1.85
MSH2YOL090W ISA1Q07821 250 aaPredicted RBP3.48□□□□□ -1.85
MSH2YOL090W GNT1Q12096 491 aa3.48□□□□□ -1.85
MSH2YOL090W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
MSH2YOL090W RPP2BP02400 110 aaKnown RBP3.47□□□□□ -1.85
MSH2YOL090W CDC16P09798 840 aa3.47□□□□□ -1.85
MSH2YOL090W HSF1P10961 833 aa3.47□□□□□ -1.85
MSH2YOL090W ADP1P25371 1049 aa3.47□□□□□ -1.85
MSH2YOL090W FUN30P31380 1131 aa3.47□□□□□ -1.85
MSH2YOL090W CDC12P32468 407 aaKnown RBP3.47□□□□□ -1.85
MSH2YOL090W CBF2P32504 956 aa3.47□□□□□ -1.85
MSH2YOL090W YKL100CP34248 587 aa3.47□□□□□ -1.85
MSH2YOL090W SEG2P34250 1132 aa3.47□□□□□ -1.85
MSH2YOL090W EMC3P36039 253 aa3.47□□□□□ -1.85
MSH2YOL090W POP2P39008 433 aa3.47□□□□□ -1.85
MSH2YOL090W EAF5P39995 279 aa3.47□□□□□ -1.85
MSH2YOL090W KAP123P40069 1113 aaKnown RBP3.47□□□□□ -1.85
MSH2YOL090W RAD26P40352 1085 aa3.47□□□□□ -1.85
MSH2YOL090W SMK1P41808 388 aa3.47□□□□□ -1.85
MSH2YOL090W PUS4P48567 403 aaKnown RBP3.47□□□□□ -1.85
MSH2YOL090W HNT2P49775 206 aa3.47□□□□□ -1.85
MSH2YOL090W YNR065CP53751 1116 aa3.47□□□□□ -1.85
MSH2YOL090W NHX1Q04121 633 aa3.47□□□□□ -1.85
MSH2YOL090W YLR345WQ06137 509 aa3.47□□□□□ -1.85
MSH2YOL090W OPT2Q06593 877 aa3.47□□□□□ -1.85
MSH2YOL090W NUR1Q12066 484 aa3.47□□□□□ -1.85
MSH2YOL090W EDE1P34216 1381 aa3.47□□□□□ -1.85
MSH2YOL090W SEM1O94742 89 aa3.47□□□□□ -1.85
MSH2YOL090W RED1P14291 827 aa3.47□□□□□ -1.85
MSH2YOL090W ACE2P21192 770 aa3.47□□□□□ -1.85
MSH2YOL090W YCL049CP25577 312 aa3.47□□□□□ -1.85
MSH2YOL090W REC104P33323 182 aa3.47□□□□□ -1.85
MSH2YOL090W BYE1P36106 594 aa3.47□□□□□ -1.85
MSH2YOL090W MRPL16P38064 232 aa3.47□□□□□ -1.85
MSH2YOL090W IFA38P38286 347 aa3.47□□□□□ -1.85
MSH2YOL090W SRP72P38688 640 aaKnown RBP3.47□□□□□ -1.85
MSH2YOL090W YHR202WP38887 602 aa3.47□□□□□ -1.85
MSH2YOL090W NPR2P39923 615 aa3.47□□□□□ -1.85
MSH2YOL090W YER010CP40011 234 aa3.47□□□□□ -1.85
MSH2YOL090W PUG1P40100 303 aa3.47□□□□□ -1.85
MSH2YOL090W NUP85P46673 744 aa3.47□□□□□ -1.85
MSH2YOL090W MAD3P47074 515 aa3.47□□□□□ -1.85
MSH2YOL090W MDE1P47095 244 aa3.47□□□□□ -1.85
MSH2YOL090W RNR4P49723 345 aaKnown RBP3.47□□□□□ -1.85
MSH2YOL090W PPT1P53043 513 aa3.47□□□□□ -1.85
MSH2YOL090W BIO5P53744 561 aaKnown RBP3.47□□□□□ -1.85
MSH2YOL090W YPL071CQ02864 156 aa3.47□□□□□ -1.85
MSH2YOL090W YDR131CQ03899 556 aa3.47□□□□□ -1.85
MSH2YOL090W YLR257WQ06146 321 aaKnown RBP3.47□□□□□ -1.85
MSH2YOL090W ARG82P07250 355 aa3.46□□□□□ -1.85
MSH2YOL090W CBP3P21560 335 aa3.46□□□□□ -1.85
MSH2YOL090W POL4P25615 582 aa3.46□□□□□ -1.85
MSH2YOL090W STE13P33894 931 aa3.46□□□□□ -1.85
MSH2YOL090W YBR225WP38321 900 aa3.46□□□□□ -1.85
MSH2YOL090W OSH7P38755 437 aa3.46□□□□□ -1.85
MSH2YOL090W SHU2P38957 223 aa3.46□□□□□ -1.85
MSH2YOL090W JEM1P40358 645 aa3.46□□□□□ -1.85
MSH2YOL090W YHM2Q04013 314 aa3.46□□□□□ -1.85
MSH2YOL090W VHS3Q08438 674 aa3.46□□□□□ -1.85
MSH2YOL090W HAL9Q12180 1030 aa3.46□□□□□ -1.85
MSH2YOL090W RPL11AP0C0W9 174 aaKnown RBP3.46□□□□□ -1.86
MSH2YOL090W PGM2P37012 569 aaKnown RBP3.46□□□□□ -1.86
MSH2YOL090W APM3P38153 483 aa3.46□□□□□ -1.86
MSH2YOL090W RGD1P38339 666 aa3.46□□□□□ -1.86
MSH2YOL090W YIL166CP40445 542 aa3.46□□□□□ -1.86
MSH2YOL090W YIL092WP40497 633 aa3.46□□□□□ -1.86
MSH2YOL090W YJR124CP47159 448 aa3.46□□□□□ -1.86
MSH2YOL090W HEL2Q05580 639 aaKnown RBP3.46□□□□□ -1.86
MSH2YOL090W RPL11BQ3E757 174 aaPredicted RBP3.46□□□□□ -1.86
MSH2YOL090W ADE8P04161 214 aa3.45□□□□□ -1.86
MSH2YOL090W ADH4P10127 382 aa3.45□□□□□ -1.86
MSH2YOL090W CDC26P14724 124 aa3.45□□□□□ -1.86
MSH2YOL090W GLK1P17709 500 aaKnown RBP3.45□□□□□ -1.86
MSH2YOL090W HCA4P20448 770 aaKnown RBP3.45□□□□□ -1.86
MSH2YOL090W XRS2P33301 854 aa3.45□□□□□ -1.86
MSH2YOL090W SLC1P33333 303 aa3.45□□□□□ -1.86
MSH2YOL090W INP51P40559 946 aaKnown RBP3.45□□□□□ -1.86
MSH2YOL090W UBP15P50101 1230 aa3.45□□□□□ -1.86
MSH2YOL090W HOS3Q02959 697 aaKnown RBP3.45□□□□□ -1.86
MSH2YOL090W YMR155WQ03795 547 aa3.45□□□□□ -1.86
MSH2YOL090W YDR341CQ05506 607 aaKnown RBP3.45□□□□□ -1.86
MSH2YOL090W ESC8Q08119 714 aa3.45□□□□□ -1.86
MSH2YOL090W CUE5Q08412 411 aaKnown RBP3.45□□□□□ -1.86
MSH2YOL090W DCS2Q12123 353 aa3.45□□□□□ -1.86
MSH2YOL090W USO1P25386 1790 aa3.45□□□□□ -1.86
MSH2YOL090W PDX1P16451 410 aa3.45□□□□□ -1.86
MSH2YOL090W HSL7P38274 827 aa3.45□□□□□ -1.86
MSH2YOL090W TSL1P38427 1098 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms