RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeast

Gene ECO1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECO1	YFR027W	RFC1	P38630	861 aa	Known RBP	3.75	□□□□□ -1.81
ECO1	YFR027W	YHR078W	P38799	552 aa		3.75	□□□□□ -1.81
ECO1	YFR027W	OSW7	P43611	510 aa		3.75	□□□□□ -1.81
ECO1	YFR027W	HXT16	P47185	567 aa		3.75	□□□□□ -1.81
ECO1	YFR027W	HSV2	P50079	448 aa	Predicted RBP	3.75	□□□□□ -1.81
ECO1	YFR027W	PUS2	P53167	370 aa		3.75	□□□□□ -1.81
ECO1	YFR027W	DUS1	P53759	423 aa	Known RBP	3.75	□□□□□ -1.81
ECO1	YFR027W	YNL247W	P53852	767 aa	Known RBP	3.75	□□□□□ -1.81
ECO1	YFR027W	INP2	Q03824	705 aa		3.75	□□□□□ -1.81
ECO1	YFR027W	LRS4	Q04087	347 aa	Known RBP	3.75	□□□□□ -1.81
ECO1	YFR027W	YDR514C	Q04408	483 aa		3.75	□□□□□ -1.81
ECO1	YFR027W	THI21	Q08975	551 aa		3.75	□□□□□ -1.81
ECO1	YFR027W	HAL9	Q12180	1030 aa		3.75	□□□□□ -1.81
ECO1	YFR027W	PNS1	Q12412	539 aa		3.75	□□□□□ -1.81
ECO1	YFR027W	MDM12	Q92328	271 aa		3.75	□□□□□ -1.81
ECO1	YFR027W	ROM2	P51862	1356 aa	Known RBP	3.75	□□□□□ -1.81
ECO1	YFR027W	AUS1	Q08409	1394 aa		3.75	□□□□□ -1.81
ECO1	YFR027W	NUP145	P49687	1317 aa		3.74	□□□□□ -1.81
ECO1	YFR027W	RPO31	P04051	1460 aa		3.74	□□□□□ -1.81
ECO1	YFR027W	ESP1	Q03018	1630 aa		3.74	□□□□□ -1.81
ECO1	YFR027W	PHO8	P11491	566 aa		3.74	□□□□□ -1.81
ECO1	YFR027W	RAD53	P22216	821 aa		3.74	□□□□□ -1.81
ECO1	YFR027W	CDC10	P25342	322 aa	Known RBP	3.74	□□□□□ -1.81
ECO1	YFR027W	YCL002C	P25565	263 aa		3.74	□□□□□ -1.81
ECO1	YFR027W	HSP104	P31539	908 aa	Known RBP	3.74	□□□□□ -1.81
ECO1	YFR027W	RPN12	P32496	274 aa		3.74	□□□□□ -1.81
ECO1	YFR027W	RPC37	P36121	282 aa		3.74	□□□□□ -1.81
ECO1	YFR027W	TOM71	P38825	639 aa	Known RBP	3.74	□□□□□ -1.81
ECO1	YFR027W	MSS4	P38994	779 aa		3.74	□□□□□ -1.81
ECO1	YFR027W	BDH2	P39713	417 aa		3.74	□□□□□ -1.81
ECO1	YFR027W	SHE4	P51534	789 aa		3.74	□□□□□ -1.81
ECO1	YFR027W	ASI2	P53895	289 aa		3.74	□□□□□ -1.81
ECO1	YFR027W	ERG5	P54781	538 aa		3.74	□□□□□ -1.81
ECO1	YFR027W	RRB1	Q04225	511 aa	Known RBP	3.74	□□□□□ -1.81
ECO1	YFR027W	PUS9	Q12069	462 aa		3.74	□□□□□ -1.81
ECO1	YFR027W	YOR022C	Q12204	715 aa		3.74	□□□□□ -1.81
ECO1	YFR027W	NKP1	Q12493	238 aa		3.74	□□□□□ -1.81
ECO1	YFR027W	YBR182C-A	Q8TGU6	64 aa		3.74	□□□□□ -1.81
ECO1	YFR027W	YOR1	P53049	1477 aa		3.73	□□□□□ -1.81
ECO1	YFR027W	ARO1	P08566	1588 aa	Known RBP	3.73	□□□□□ -1.81
ECO1	YFR027W	TRP4	P07285	380 aa	Predicted RBP	3.73	□□□□□ -1.81
ECO1	YFR027W	MSH2	P25847	964 aa		3.73	□□□□□ -1.81
ECO1	YFR027W	RPL5	P26321	297 aa	Known RBP	3.73	□□□□□ -1.81
ECO1	YFR027W	YME2	P32843	850 aa		3.73	□□□□□ -1.81
ECO1	YFR027W	TIF3	P34167	436 aa	Known RBP	3.73	□□□□□ -1.81
ECO1	YFR027W	MTC2	P34246	357 aa		3.73	□□□□□ -1.81
ECO1	YFR027W	CTF13	P35203	478 aa		3.73	□□□□□ -1.81
ECO1	YFR027W	SET5	P38890	526 aa	Known RBP	3.73	□□□□□ -1.81
ECO1	YFR027W	AIM21	P40563	679 aa		3.73	□□□□□ -1.81
ECO1	YFR027W	SEC27	P41811	889 aa	Known RBP	3.73	□□□□□ -1.81
ECO1	YFR027W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
ECO1	YFR027W	MSE1	P48525	536 aa		3.73	□□□□□ -1.81
ECO1	YFR027W	DNM1	P54861	757 aa		3.73	□□□□□ -1.81
ECO1	YFR027W	UBX2	Q04228	584 aa		3.73	□□□□□ -1.81
ECO1	YFR027W	SWM1	Q12379	170 aa		3.73	□□□□□ -1.81
ECO1	YFR027W	TRM11	Q12463	433 aa		3.73	□□□□□ -1.81
ECO1	YFR027W	VPS5	Q92331	675 aa		3.73	□□□□□ -1.81
ECO1	YFR027W	GEA2	P39993	1459 aa	Known RBP	3.73	□□□□□ -1.81
ECO1	YFR027W	KOG1	P38873	1557 aa		3.72	□□□□□ -1.81
ECO1	YFR027W	GDB1	Q06625	1536 aa		3.72	□□□□□ -1.81
ECO1	YFR027W	PRC1	P00729	532 aa		3.72	□□□□□ -1.81
ECO1	YFR027W	PRP4	P20053	465 aa	Known RBP	3.72	□□□□□ -1.81
ECO1	YFR027W	CAD1	P24813	409 aa	Known RBP	3.72	□□□□□ -1.81
ECO1	YFR027W	HRR25	P29295	494 aa	Known RBP	3.72	□□□□□ -1.81
ECO1	YFR027W	EFT1	P32324	842 aa	Known RBP	3.72	□□□□□ -1.81
ECO1	YFR027W	NUF2	P33895	451 aa		3.72	□□□□□ -1.81
ECO1	YFR027W	PIM1	P36775	1133 aa		3.72	□□□□□ -1.81
ECO1	YFR027W	CHS7	P38843	316 aa		3.72	□□□□□ -1.81
ECO1	YFR027W	RSM25	P40496	264 aa		3.72	□□□□□ -1.81
ECO1	YFR027W	HYR1	P40581	163 aa	Known RBP	3.72	□□□□□ -1.81
ECO1	YFR027W	RLP7	P40693	322 aa	Known RBP	3.72	□□□□□ -1.81
ECO1	YFR027W	ZDS1	P50111	915 aa	Known RBP	3.72	□□□□□ -1.81
ECO1	YFR027W	SLI1	P53304	468 aa		3.72	□□□□□ -1.81
ECO1	YFR027W	HST1	P53685	503 aa		3.72	□□□□□ -1.81
ECO1	YFR027W	IST1	P53843	298 aa	Predicted RBP	3.72	□□□□□ -1.81
ECO1	YFR027W	ORC1	P54784	914 aa	Predicted RBP	3.72	□□□□□ -1.81
ECO1	YFR027W	KIN4	Q01919	800 aa		3.72	□□□□□ -1.81
ECO1	YFR027W	SPO19	Q03029	223 aa		3.72	□□□□□ -1.81
ECO1	YFR027W	YDR341C	Q05506	607 aa	Known RBP	3.72	□□□□□ -1.81
ECO1	YFR027W	RSC3	Q06639	885 aa		3.72	□□□□□ -1.81
ECO1	YFR027W	AIM39	Q08223	395 aa		3.72	□□□□□ -1.81
ECO1	YFR027W	ABP140	Q08641	628 aa	Known RBP	3.72	□□□□□ -1.81
ECO1	YFR027W	SLX4	Q12098	748 aa		3.72	□□□□□ -1.81
ECO1	YFR027W	TY3B-I	Q7LHG5	1498 aa	Known RBP	3.72	□□□□□ -1.81
ECO1	YFR027W	YRB1	P41920	201 aa	Known RBP	3.71	□□□□□ -1.82
ECO1	YFR027W	CIR1	P42940	261 aa		3.71	□□□□□ -1.82
ECO1	YFR027W	SSY5	P47002	699 aa		3.71	□□□□□ -1.82
ECO1	YFR027W	ZIP2	P53061	704 aa		3.71	□□□□□ -1.82
ECO1	YFR027W	SUN4	P53616	420 aa		3.71	□□□□□ -1.82
ECO1	YFR027W	UGO1	Q03327	502 aa		3.71	□□□□□ -1.82
ECO1	YFR027W	ARO80	Q04052	950 aa		3.71	□□□□□ -1.82
ECO1	YFR027W	TSR1	Q07381	788 aa	Known RBP	3.71	□□□□□ -1.82
ECO1	YFR027W	YDL144C	Q07589	356 aa		3.71	□□□□□ -1.82
ECO1	YFR027W	YRF1-4	O13559	1382 aa		3.71	□□□□□ -1.82
ECO1	YFR027W	DRS2	P39524	1355 aa		3.71	□□□□□ -1.82
ECO1	YFR027W	RAV1	P47104	1357 aa		3.71	□□□□□ -1.82
ECO1	YFR027W	ESC1	Q03661	1658 aa	Known RBP	3.71	□□□□□ -1.82
ECO1	YFR027W	HIR3	P47171	1648 aa		3.7	□□□□□ -1.82
ECO1	YFR027W	DIF1	O13577	133 aa		3.7	□□□□□ -1.82
ECO1	YFR027W	CDC9	P04819	755 aa		3.7	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 216.7 ms