Protein–RNA interactions for Protein: P20053

PRP4, U4/U6 small nuclear ribonucleoprotein PRP4, yeastyeast

Known RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP4P20053 NSR1YGR159C 1245 nt20.07■□□□□ 0.8
PRP4P20053 YML009W-BYML009W-B 477 nt19.64■□□□□ 0.73
PRP4P20053 NOP1YDL014W 984 nt18.82■□□□□ 0.6
PRP4P20053 MDJ1YFL016C 1536 nt18.43■□□□□ 0.54
PRP4P20053 YJL027CYJL027C 417 nt16.9■□□□□ 0.3
PRP4P20053 YKL036CYKL036C 393 nt16.82■□□□□ 0.28
PRP4P20053 SRX1YKL086W 384 nt16.48■□□□□ 0.23
PRP4P20053 Q0297Q0297 156 nt16.32■□□□□ 0.2
PRP4P20053 DBP2YNL112W 1641 nt16.1■□□□□ 0.17
PRP4P20053 YBR190WYBR190W 312 nt15.86■□□□□ 0.13
PRP4P20053 YCR051WYCR051W 669 nt15.55■□□□□ 0.08
PRP4P20053 SSA3YBL075C 1950 nt15.47■□□□□ 0.07
PRP4P20053 RTC3YHR087W 336 nt15.42■□□□□ 0.06
PRP4P20053 TRN1tP(UGG)A 72 nt15.29■□□□□ 0.04
PRP4P20053 SUF9tP(UGG)F 72 nt15.29■□□□□ 0.04
PRP4P20053 SUF8tP(UGG)H 72 nt15.29■□□□□ 0.04
PRP4P20053 tP(UGG)LtP(UGG)L 72 nt15.29■□□□□ 0.04
PRP4P20053 SUF7tP(UGG)M 72 nt15.29■□□□□ 0.04
PRP4P20053 tP(UGG)N1tP(UGG)N1 72 nt15.29■□□□□ 0.04
PRP4P20053 tP(UGG)N2tP(UGG)N2 72 nt15.29■□□□□ 0.04
PRP4P20053 tP(UGG)O1tP(UGG)O1 72 nt15.29■□□□□ 0.04
PRP4P20053 SUF11tP(UGG)O2 72 nt15.29■□□□□ 0.04
PRP4P20053 CCC1YLR220W 969 nt15.08■□□□□ 0
PRP4P20053 SCS3YGL126W 1143 nt15.01□□□□□ -0.01
PRP4P20053 PUT4YOR348C 1884 nt14.92□□□□□ -0.02
PRP4P20053 RVS167YDR388W 1449 nt14.89□□□□□ -0.03
PRP4P20053 SCJ1YMR214W 1134 nt14.78□□□□□ -0.04
PRP4P20053 RPP1BYDL130W 321 nt14.63□□□□□ -0.07
PRP4P20053 YOL085CYOL085C 342 nt14.61□□□□□ -0.07
PRP4P20053 ARE1YCR048W 1833 nt14.46□□□□□ -0.09
PRP4P20053 PKP1YIL042C 1185 nt14.45□□□□□ -0.1
PRP4P20053 POA1YBR022W 534 nt14.36□□□□□ -0.11
PRP4P20053 SHR5YOL110W 714 nt14.27□□□□□ -0.13
PRP4P20053 SAH1YER043C 1350 nt14.25□□□□□ -0.13
PRP4P20053 URN1YPR152C 1398 nt14.24□□□□□ -0.13
PRP4P20053 tP(UGG)O3tP(UGG)O3 72 nt14.24□□□□□ -0.13
PRP4P20053 YHR049C-AYHR049C-A 297 nt14.24□□□□□ -0.13
PRP4P20053 BSC6YOL137W 1494 nt14.18□□□□□ -0.14
PRP4P20053 OPI9YLR338W 858 nt14.18□□□□□ -0.14
PRP4P20053 SPT5YML010W 3192 nt14.1□□□□□ -0.15
PRP4P20053 PET122YER153C 765 nt14.07□□□□□ -0.16
PRP4P20053 DEP1YAL013W 1218 nt14.06□□□□□ -0.16
PRP4P20053 RPN10YHR200W 807 nt13.85□□□□□ -0.19
PRP4P20053 SSA4YER103W 1929 nt13.82□□□□□ -0.2
PRP4P20053 BUD23YCR047C 828 nt13.82□□□□□ -0.2
PRP4P20053 YDJ1YNL064C 1230 nt13.79□□□□□ -0.2
PRP4P20053 YNL208WYNL208W 600 nt13.77□□□□□ -0.21
PRP4P20053 PUN1YLR414C 792 nt13.74□□□□□ -0.21
PRP4P20053 PTC2YER089C 1395 nt13.7□□□□□ -0.22
PRP4P20053 SCR1SCR1 522 nt13.69□□□□□ -0.22
PRP4P20053 NAB2YGL122C 1578 nt13.59□□□□□ -0.23
PRP4P20053 RRN5YLR141W 1092 nt13.59□□□□□ -0.23
PRP4P20053 GAR1YHR089C 618 nt13.55□□□□□ -0.24
PRP4P20053 YJR018WYJR018W 363 nt13.54□□□□□ -0.24
PRP4P20053 FIS1YIL065C 468 nt13.4□□□□□ -0.26
PRP4P20053 BDF1YLR399C 2061 nt13.4□□□□□ -0.27
PRP4P20053 MEP2YNL142W 1500 nt13.39□□□□□ -0.27
PRP4P20053 YER088W-BYER088W-B 147 nt13.33□□□□□ -0.28
PRP4P20053 DAL1YIR027C 1383 nt13.31□□□□□ -0.28
PRP4P20053 YJR120WYJR120W 351 nt13.3□□□□□ -0.28
PRP4P20053 ATS1YAL020C 1002 nt13.24□□□□□ -0.29
PRP4P20053 FPR4YLR449W 1179 nt13.21□□□□□ -0.29
PRP4P20053 TAT1YBR069C 1860 nt13.2□□□□□ -0.3
PRP4P20053 PHO4YFR034C 939 nt13.19□□□□□ -0.3
PRP4P20053 DCW1YKL046C 1350 nt13.18□□□□□ -0.3
PRP4P20053 YPS1YLR120C 1710 nt13.17□□□□□ -0.3
PRP4P20053 SSA1YAL005C 1929 nt13.15□□□□□ -0.3
PRP4P20053 TIR1YER011W 765 nt13.14□□□□□ -0.31
PRP4P20053 INM2YDR287W 879 nt13.13□□□□□ -0.31
PRP4P20053 RSB1YOR049C 1065 nt13.09□□□□□ -0.31
PRP4P20053 RPP2BYDR382W 333 nt13.07□□□□□ -0.32
PRP4P20053 YHR165W-AYHR165W-A 312 nt13.01□□□□□ -0.33
PRP4P20053 YDR095CYDR095C 411 nt12.99□□□□□ -0.33
PRP4P20053 YBR220CYBR220C 1683 nt12.96□□□□□ -0.33
PRP4P20053 EMI2YDR516C 1503 nt12.96□□□□□ -0.33
PRP4P20053 YBL100CYBL100C 315 nt12.92□□□□□ -0.34
PRP4P20053 SRB2YHR041C 633 nt12.86□□□□□ -0.35
PRP4P20053 YMR090WYMR090W 684 nt12.86□□□□□ -0.35
PRP4P20053 YDL221WYDL221W 552 nt12.83□□□□□ -0.36
PRP4P20053 PTP1YDL230W 1008 nt12.8□□□□□ -0.36
PRP4P20053 CAC2YML102W 1407 nt12.79□□□□□ -0.36
PRP4P20053 SDH1YKL148C 1923 nt12.79□□□□□ -0.36
PRP4P20053 FUN26YAL022C 1554 nt12.76□□□□□ -0.37
PRP4P20053 BDH2YAL061W 1254 nt12.75□□□□□ -0.37
PRP4P20053 RPP2AYOL039W 321 nt12.72□□□□□ -0.37
PRP4P20053 PAC11YDR488C 1602 nt12.7□□□□□ -0.38
PRP4P20053 ALF1YNL148C 765 nt12.65□□□□□ -0.38
PRP4P20053 SCC4YER147C 1875 nt12.61□□□□□ -0.39
PRP4P20053 IRC15YPL017C 1500 nt12.61□□□□□ -0.39
PRP4P20053 PCH2YBR186W 1695 nt12.61□□□□□ -0.39
PRP4P20053 TRM9YML014W 840 nt12.58□□□□□ -0.4
PRP4P20053 GUT2YIL155C 1950 nt12.58□□□□□ -0.4
PRP4P20053 SEC11YIR022W 504 nt12.54□□□□□ -0.4
PRP4P20053 SIS1YNL007C 1059 nt12.54□□□□□ -0.4
PRP4P20053 CCT6YDR188W 1641 nt12.54□□□□□ -0.4
PRP4P20053 GIS3YLR094C 1509 nt12.52□□□□□ -0.4
PRP4P20053 WWM1YFL010C 636 nt12.47□□□□□ -0.41
PRP4P20053 LSM3YLR438C-A 270 nt12.47□□□□□ -0.41
PRP4P20053 PIB2YGL023C 1908 nt12.43□□□□□ -0.42
PRP4P20053 GFD2YCL036W 1701 nt12.42□□□□□ -0.42
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms