RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C PRP4P20053 465 aaKnown RBP4.03□□□□□ -1.76
SHG1YBR258C KAR4P25583 335 aa4.03□□□□□ -1.76
SHG1YBR258C CCR4P31384 837 aaKnown RBP4.03□□□□□ -1.76
SHG1YBR258C YKR018CP36114 725 aa4.03□□□□□ -1.76
SHG1YBR258C HSL7P38274 827 aa4.03□□□□□ -1.76
SHG1YBR258C IRC24P40580 263 aa4.03□□□□□ -1.76
SHG1YBR258C SHR5P41912 237 aa4.03□□□□□ -1.76
SHG1YBR258C SSY5P47002 699 aa4.03□□□□□ -1.76
SHG1YBR258C SDA1P53313 767 aaKnown RBP4.03□□□□□ -1.76
SHG1YBR258C RIA1P53893 1110 aa4.03□□□□□ -1.76
SHG1YBR258C MUS81Q04149 632 aaPredicted RBP4.03□□□□□ -1.76
SHG1YBR258C TMA10Q06177 86 aa4.03□□□□□ -1.76
SHG1YBR258C LAS17Q12446 633 aa4.03□□□□□ -1.76
SHG1YBR258C KRE5P22023 1365 aa4.02□□□□□ -1.77
SHG1YBR258C TOR1P35169 2470 aa4.02□□□□□ -1.77
SHG1YBR258C POM152P39685 1337 aa4.02□□□□□ -1.77
SHG1YBR258C UBP5P39944 805 aa4.02□□□□□ -1.77
SHG1YBR258C PFA3P42836 336 aa4.02□□□□□ -1.77
SHG1YBR258C GPG1P53130 126 aa4.02□□□□□ -1.77
SHG1YBR258C ERG5P54781 538 aa4.02□□□□□ -1.77
SHG1YBR258C THI73Q07904 523 aa4.02□□□□□ -1.77
SHG1YBR258C GIN4Q12263 1142 aa4.02□□□□□ -1.77
SHG1YBR258C TRM11Q12463 433 aa4.02□□□□□ -1.77
SHG1YBR258C RRP5Q05022 1729 aaKnown RBP4.01□□□□□ -1.77
SHG1YBR258C YLR278CQ05854 1341 aa4.01□□□□□ -1.77
SHG1YBR258C PMA1P05030 918 aaKnown RBP4.01□□□□□ -1.77
SHG1YBR258C CTS1P29029 562 aa4.01□□□□□ -1.77
SHG1YBR258C YKR051WP36142 418 aa4.01□□□□□ -1.77
SHG1YBR258C ECM1P39715 212 aa4.01□□□□□ -1.77
SHG1YBR258C YJR096WP47137 282 aa4.01□□□□□ -1.77
SHG1YBR258C HLJ1P48353 224 aa4.01□□□□□ -1.77
SHG1YBR258C BUL1P48524 976 aa4.01□□□□□ -1.77
SHG1YBR258C AIM14P53109 570 aa4.01□□□□□ -1.77
SHG1YBR258C UME1Q03010 460 aa4.01□□□□□ -1.77
SHG1YBR258C GUD1Q07729 489 aa4.01□□□□□ -1.77
SHG1YBR258C SWM1Q12379 170 aa4.01□□□□□ -1.77
SHG1YBR258C URB1P34241 1764 aaKnown RBP4□□□□□ -1.77
SHG1YBR258C YLR415CO13578 112 aa4□□□□□ -1.77
SHG1YBR258C CTF13P35203 478 aa4□□□□□ -1.77
SHG1YBR258C PAF1P38351 445 aa4□□□□□ -1.77
SHG1YBR258C MIP6P38760 659 aaKnown RBP4□□□□□ -1.77
SHG1YBR258C CKB2P38930 258 aa4□□□□□ -1.77
SHG1YBR258C MSS4P38994 779 aa4□□□□□ -1.77
SHG1YBR258C PZF1P39933 429 aa4□□□□□ -1.77
SHG1YBR258C DOT6P40059 670 aaKnown RBP4□□□□□ -1.77
SHG1YBR258C GID8P40208 455 aa4□□□□□ -1.77
SHG1YBR258C VHR1P40522 640 aa4□□□□□ -1.77
SHG1YBR258C YFL052WP43551 465 aa4□□□□□ -1.77
SHG1YBR258C PCL10P53124 433 aa4□□□□□ -1.77
SHG1YBR258C NPY1P53164 384 aa4□□□□□ -1.77
SHG1YBR258C CRR1Q05790 422 aa4□□□□□ -1.77
SHG1YBR258C RPN7Q06103 429 aaKnown RBP4□□□□□ -1.77
SHG1YBR258C PEX19Q07418 342 aa4□□□□□ -1.77
SHG1YBR258C ESC8Q08119 714 aa4□□□□□ -1.77
SHG1YBR258C Q0142Q9ZZW4 58 aa4□□□□□ -1.77
SHG1YBR258C NUP145P49687 1317 aa3.99□□□□□ -1.77
SHG1YBR258C TRP4P07285 380 aaPredicted RBP3.99□□□□□ -1.77
SHG1YBR258C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
SHG1YBR258C NGG1P32494 702 aa3.99□□□□□ -1.77
SHG1YBR258C SAK1P38990 1142 aa3.99□□□□□ -1.77
SHG1YBR258C MPT5P39016 859 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
SHG1YBR258C RET2P43621 546 aa3.99□□□□□ -1.77
SHG1YBR258C YJR039WP47107 1121 aa3.99□□□□□ -1.77
SHG1YBR258C YGR237CP50089 785 aa3.99□□□□□ -1.77
SHG1YBR258C UBC9P50623 157 aaPredicted RBP3.99□□□□□ -1.77
SHG1YBR258C MCM6P53091 1017 aaKnown RBP3.99□□□□□ -1.77
SHG1YBR258C ARP4P80428 489 aa3.99□□□□□ -1.77
SHG1YBR258C MTQ2Q03920 221 aaPredicted RBP3.99□□□□□ -1.77
SHG1YBR258C ASM4Q05166 528 aa3.99□□□□□ -1.77
SHG1YBR258C DCS2Q12123 353 aa3.99□□□□□ -1.77
SHG1YBR258C PRP45P28004 379 aaPredicted RBP3.98□□□□□ -1.77
SHG1YBR258C CCT5P40413 562 aaKnown RBP3.98□□□□□ -1.77
SHG1YBR258C GPP1P41277 250 aaKnown RBP3.98□□□□□ -1.77
SHG1YBR258C GZF3P42944 551 aaKnown RBP3.98□□□□□ -1.77
SHG1YBR258C MTR3P48240 250 aaPredicted RBP3.98□□□□□ -1.77
SHG1YBR258C PKH1Q03407 766 aa3.98□□□□□ -1.77
SHG1YBR258C HMO1Q03973 246 aaKnown RBP3.98□□□□□ -1.77
SHG1YBR258C TSR4P25040 408 aa3.97□□□□□ -1.77
SHG1YBR258C YBR259WP38338 688 aa3.97□□□□□ -1.77
SHG1YBR258C RPP1P38786 293 aa3.97□□□□□ -1.77
SHG1YBR258C SSZ1P38788 538 aaKnown RBP3.97□□□□□ -1.77
SHG1YBR258C YEN1P40028 759 aa3.97□□□□□ -1.77
SHG1YBR258C MRPS35P53292 345 aa3.97□□□□□ -1.77
SHG1YBR258C HFD1Q04458 532 aa3.97□□□□□ -1.77
SHG1YBR258C MCM21Q06675 368 aa3.97□□□□□ -1.77
SHG1YBR258C NTO1Q12311 748 aa3.97□□□□□ -1.77
SHG1YBR258C ATG11Q12527 1178 aa3.97□□□□□ -1.77
SHG1YBR258C APM4Q99186 491 aa3.97□□□□□ -1.77
SHG1YBR258C RSF2P46974 1380 aa3.97□□□□□ -1.77
SHG1YBR258C CFT1Q06632 1357 aaKnown RBP3.97□□□□□ -1.77
SHG1YBR258C SSB1P11484 613 aaKnown RBP3.96□□□□□ -1.78
SHG1YBR258C PFK1P16861 987 aaKnown RBP3.96□□□□□ -1.78
SHG1YBR258C PRP19P32523 503 aaKnown RBP3.96□□□□□ -1.78
SHG1YBR258C DEF1P35732 738 aaKnown RBP3.96□□□□□ -1.78
SHG1YBR258C APL2P36000 726 aaPredicted RBP3.96□□□□□ -1.78
SHG1YBR258C BEM4P39011 633 aa3.96□□□□□ -1.78
SHG1YBR258C SSB2P40150 613 aaKnown RBP3.96□□□□□ -1.78
SHG1YBR258C TAF1P46677 1066 aa3.96□□□□□ -1.78
SHG1YBR258C BRE5P53741 515 aaKnown RBP3.96□□□□□ -1.78
SHG1YBR258C ARG5,6Q01217 863 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms