RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W GCR1P07261 785 aa3.91□□□□□ -1.78
MSD1YPL104W PCK1P10963 549 aa3.91□□□□□ -1.78
MSD1YPL104W TCP1P12612 559 aaKnown RBP3.91□□□□□ -1.78
MSD1YPL104W SEC23P15303 768 aaKnown RBP3.91□□□□□ -1.78
MSD1YPL104W VMA2P16140 517 aaKnown RBP3.91□□□□□ -1.78
MSD1YPL104W PET123P17558 318 aa3.91□□□□□ -1.78
MSD1YPL104W BAS1P22035 811 aa3.91□□□□□ -1.78
MSD1YPL104W APL1P27351 700 aa3.91□□□□□ -1.78
MSD1YPL104W YHR020WP38708 688 aaKnown RBP3.91□□□□□ -1.78
MSD1YPL104W DYS1P38791 387 aa3.91□□□□□ -1.78
MSD1YPL104W CAJ1P39101 391 aa3.91□□□□□ -1.78
MSD1YPL104W RSP5P39940 809 aaKnown RBP3.91□□□□□ -1.78
MSD1YPL104W RPN3P40016 523 aaKnown RBP3.91□□□□□ -1.78
MSD1YPL104W NTA1P40354 457 aa3.91□□□□□ -1.78
MSD1YPL104W QDR2P40474 542 aa3.91□□□□□ -1.78
MSD1YPL104W YIL089WP40500 205 aa3.91□□□□□ -1.78
MSD1YPL104W FIS1P40515 155 aa3.91□□□□□ -1.78
MSD1YPL104W SUM1P46676 1062 aa3.91□□□□□ -1.78
MSD1YPL104W NET1P47035 1189 aa3.91□□□□□ -1.78
MSD1YPL104W YJR115WP47152 169 aa3.91□□□□□ -1.78
MSD1YPL104W APT1P49435 187 aaKnown RBP3.91□□□□□ -1.78
MSD1YPL104W MON1P53129 644 aa3.91□□□□□ -1.78
MSD1YPL104W ZPR1P53303 486 aaKnown RBP3.91□□□□□ -1.78
MSD1YPL104W YNL165WP53891 406 aa3.91□□□□□ -1.78
MSD1YPL104W YPL109CQ02981 657 aa3.91□□□□□ -1.78
MSD1YPL104W VPS72Q03388 795 aa3.91□□□□□ -1.78
MSD1YPL104W YPL277CQ08989 487 aa3.91□□□□□ -1.78
MSD1YPL104W FLP1P03870 423 aa3.91□□□□□ -1.78
MSD1YPL104W ERR1P0CX10 437 aa3.91□□□□□ -1.78
MSD1YPL104W ERR2P0CX11 437 aa3.91□□□□□ -1.78
MSD1YPL104W MTF2P10849 440 aa3.91□□□□□ -1.78
MSD1YPL104W CDC60P26637 1090 aaKnown RBP3.91□□□□□ -1.78
MSD1YPL104W MRF1P30775 413 aaPredicted RBP3.91□□□□□ -1.78
MSD1YPL104W CRP1P38845 465 aaKnown RBP3.91□□□□□ -1.78
MSD1YPL104W GPB2P39717 880 aa3.91□□□□□ -1.78
MSD1YPL104W SHQ1P40486 507 aaPredicted RBP3.91□□□□□ -1.78
MSD1YPL104W ULP2P40537 1034 aaPredicted RBP3.91□□□□□ -1.78
MSD1YPL104W CTR1P49573 406 aa3.91□□□□□ -1.78
MSD1YPL104W VID30P53076 958 aa3.91□□□□□ -1.78
MSD1YPL104W YGR125WP53273 1036 aa3.91□□□□□ -1.78
MSD1YPL104W TOF1P53840 1238 aa3.91□□□□□ -1.78
MSD1YPL104W NCS2P53923 493 aaPredicted RBP3.91□□□□□ -1.78
MSD1YPL104W ULP1Q02724 621 aa3.91□□□□□ -1.78
MSD1YPL104W UME1Q03010 460 aa3.91□□□□□ -1.78
MSD1YPL104W UTP5Q04177 643 aaKnown RBP3.91□□□□□ -1.78
MSD1YPL104W YML082WQ04533 649 aaKnown RBP3.91□□□□□ -1.78
MSD1YPL104W CUR1Q06469 252 aa3.91□□□□□ -1.78
MSD1YPL104W CRD1Q07560 283 aa3.91□□□□□ -1.78
MSD1YPL104W ISA1Q07821 250 aaPredicted RBP3.91□□□□□ -1.78
MSD1YPL104W GYP1Q08484 637 aa3.91□□□□□ -1.78
MSD1YPL104W NEW1Q08972 1196 aaKnown RBP3.91□□□□□ -1.78
MSD1YPL104W PLP2Q12017 286 aa3.91□□□□□ -1.78
MSD1YPL104W NOP58Q12499 511 aaKnown RBP3.91□□□□□ -1.78
MSD1YPL104W PET111P08468 800 aa3.9□□□□□ -1.79
MSD1YPL104W SPO12P17123 173 aa3.9□□□□□ -1.79
MSD1YPL104W TRK2P28584 889 aa3.9□□□□□ -1.79
MSD1YPL104W EUG1P32474 517 aa3.9□□□□□ -1.79
MSD1YPL104W STO1P34160 861 aaKnown RBP3.9□□□□□ -1.79
MSD1YPL104W PGM2P37012 569 aaKnown RBP3.9□□□□□ -1.79
MSD1YPL104W YBR184WP38299 523 aa3.9□□□□□ -1.79
MSD1YPL104W UBP5P39944 805 aa3.9□□□□□ -1.79
MSD1YPL104W PIC2P40035 300 aa3.9□□□□□ -1.79
MSD1YPL104W SEC9P40357 651 aa3.9□□□□□ -1.79
MSD1YPL104W CEP3P40969 608 aa3.9□□□□□ -1.79
MSD1YPL104W IES1P43579 692 aa3.9□□□□□ -1.79
MSD1YPL104W SMC3P47037 1230 aa3.9□□□□□ -1.79
MSD1YPL104W CCM1P48237 864 aaPredicted RBP3.9□□□□□ -1.79
MSD1YPL104W YGL039WP53183 348 aaKnown RBP3.9□□□□□ -1.79
MSD1YPL104W CAF130P53280 1122 aaPredicted RBP3.9□□□□□ -1.79
MSD1YPL104W VPS60Q03390 229 aa3.9□□□□□ -1.79
MSD1YPL104W SFI1Q12369 946 aa3.9□□□□□ -1.79
MSD1YPL104W ECM29P38737 1868 aa3.89□□□□□ -1.79
MSD1YPL104W CDC19P00549 500 aaKnown RBP3.89□□□□□ -1.79
MSD1YPL104W UBC1P21734 215 aaKnown RBP3.89□□□□□ -1.79
MSD1YPL104W DAL7P21826 554 aa3.89□□□□□ -1.79
MSD1YPL104W TKL1P23254 680 aaKnown RBP3.89□□□□□ -1.79
MSD1YPL104W MLF3P32047 452 aa3.89□□□□□ -1.79
MSD1YPL104W YSC83P32792 385 aa3.89□□□□□ -1.79
MSD1YPL104W XRS2P33301 854 aa3.89□□□□□ -1.79
MSD1YPL104W YEL1P34225 687 aa3.89□□□□□ -1.79
MSD1YPL104W UBP13P38187 747 aa3.89□□□□□ -1.79
MSD1YPL104W MCX1P38323 520 aaPredicted RBP3.89□□□□□ -1.79
MSD1YPL104W SMC2P38989 1170 aaKnown RBP3.89□□□□□ -1.79
MSD1YPL104W CCC2P38995 1004 aa3.89□□□□□ -1.79
MSD1YPL104W DLD3P39976 496 aaKnown RBP3.89□□□□□ -1.79
MSD1YPL104W ALA1P40825 983 aaKnown RBP3.89□□□□□ -1.79
MSD1YPL104W COS5P47187 383 aa3.89□□□□□ -1.79
MSD1YPL104W ADI1Q03677 179 aa3.89□□□□□ -1.79
MSD1YPL104W GIR2Q03768 265 aaPredicted RBP3.89□□□□□ -1.79
MSD1YPL104W OPY2Q06810 360 aa3.89□□□□□ -1.79
MSD1YPL104W YPR078CQ06813 372 aa3.89□□□□□ -1.79
MSD1YPL104W RTT10Q08924 1013 aa3.89□□□□□ -1.79
MSD1YPL104W CFT2Q12102 859 aaPredicted RBP3.89□□□□□ -1.79
MSD1YPL104W ERP3Q12403 225 aa3.89□□□□□ -1.79
MSD1YPL104W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
MSD1YPL104W TOM70P07213 617 aaKnown RBP3.89□□□□□ -1.79
MSD1YPL104W PPR1P07272 904 aaPredicted RBP3.89□□□□□ -1.79
MSD1YPL104W DBP5P20449 482 aaKnown RBP3.89□□□□□ -1.79
MSD1YPL104W RAD57P25301 460 aa3.89□□□□□ -1.79
MSD1YPL104W NIP100P33420 868 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms