RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C NAB3P38996 802 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
CAF4YKR036C STB2P46679 850 aa5.13□□□□□ -1.59
CAF4YKR036C ECL1P48235 211 aa5.13□□□□□ -1.59
CAF4YKR036C COP1P53622 1201 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59 RIP-Chip
CAF4YKR036C CIK1Q01649 594 aa5.13□□□□□ -1.59
CAF4YKR036C YPQ2Q06328 317 aa5.13□□□□□ -1.59
CAF4YKR036C ESF1Q06344 628 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C RRP9Q06506 573 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C VIP1Q06685 1146 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C SUB2Q07478 446 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C YDL124WQ07551 312 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C RIO1Q12196 484 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C WHI5Q12416 295 aa5.13□□□□□ -1.59
CAF4YKR036C RPL17AP05740 184 aaKnown RBP5.12□□□□□ -1.59
CAF4YKR036C CDC6P09119 513 aa5.12□□□□□ -1.59
CAF4YKR036C SPS22P25380 463 aa5.12□□□□□ -1.59
CAF4YKR036C YKR015CP36111 568 aa5.12□□□□□ -1.59
CAF4YKR036C LDH1P38139 375 aa5.12□□□□□ -1.59
CAF4YKR036C RPL17BP46990 184 aaKnown RBP5.12□□□□□ -1.59
CAF4YKR036C CLA4P48562 842 aa5.12□□□□□ -1.59
CAF4YKR036C LSG1P53145 640 aaKnown RBP5.12□□□□□ -1.59
CAF4YKR036C VPS62P53285 467 aa5.12□□□□□ -1.59
CAF4YKR036C RPM2Q02773 1202 aa5.12□□□□□ -1.59
CAF4YKR036C GTB1Q04924 702 aa5.12□□□□□ -1.59
CAF4YKR036C DON1Q05610 365 aa5.12□□□□□ -1.59
CAF4YKR036C YOR111WQ99210 232 aa5.12□□□□□ -1.59
CAF4YKR036C RPL24AP04449 155 aaKnown RBP5.11□□□□□ -1.59
CAF4YKR036C MPH3P0CE00 602 aa5.11□□□□□ -1.59
CAF4YKR036C URA4P20051 364 aa5.11□□□□□ -1.59
CAF4YKR036C HSP78P33416 811 aa5.11□□□□□ -1.59
CAF4YKR036C NIP100P33420 868 aa5.11□□□□□ -1.59
CAF4YKR036C YBL055CP34220 418 aaPredicted RBP5.11□□□□□ -1.59
CAF4YKR036C PDS1P40316 373 aaPredicted RBP5.11□□□□□ -1.59
CAF4YKR036C JEM1P40358 645 aa5.11□□□□□ -1.59
CAF4YKR036C YGL176CP46945 554 aa5.11□□□□□ -1.59
CAF4YKR036C RFX1P48743 811 aa5.11□□□□□ -1.59
CAF4YKR036C ESF2P53743 316 aaKnown RBP5.11□□□□□ -1.59
CAF4YKR036C FRA1Q07825 749 aa5.11□□□□□ -1.59
CAF4YKR036C KEL3Q08979 651 aaPredicted RBP5.11□□□□□ -1.59
CAF4YKR036C CWC2Q12046 339 aaPredicted RBP5.11□□□□□ -1.59
CAF4YKR036C SCM3Q12334 223 aa5.11□□□□□ -1.59
CAF4YKR036C SPO21Q12411 609 aa5.11□□□□□ -1.59
CAF4YKR036C PTC5Q12511 572 aa5.11□□□□□ -1.59
CAF4YKR036C REP1P03871 373 aa5.11□□□□□ -1.59
CAF4YKR036C ERG12P07277 443 aa5.11□□□□□ -1.59
CAF4YKR036C CLN3P13365 580 aa5.11□□□□□ -1.59
CAF4YKR036C RSR1P13856 272 aa5.11□□□□□ -1.59
CAF4YKR036C YAK1P14680 807 aa5.11□□□□□ -1.59
CAF4YKR036C CNA1P23287 553 aa5.11□□□□□ -1.59
CAF4YKR036C PER1P25625 357 aa5.11□□□□□ -1.59
CAF4YKR036C RCN1P36054 211 aa5.11□□□□□ -1.59
CAF4YKR036C JNM1P36224 373 aa5.11□□□□□ -1.59
CAF4YKR036C GEF1P37020 779 aa5.11□□□□□ -1.59
CAF4YKR036C CST26P38226 397 aa5.11□□□□□ -1.59
CAF4YKR036C MUM2P38236 366 aa5.11□□□□□ -1.59
CAF4YKR036C KIC1P38692 1080 aa5.11□□□□□ -1.59
CAF4YKR036C YJL007CP47080 104 aa5.11□□□□□ -1.59
CAF4YKR036C RCF1Q03713 159 aa5.11□□□□□ -1.59
CAF4YKR036C YDR341CQ05506 607 aaKnown RBP5.11□□□□□ -1.59
CAF4YKR036C PNP1Q05788 311 aa5.11□□□□□ -1.59
CAF4YKR036C TAF3Q12297 353 aa5.11□□□□□ -1.59
CAF4YKR036C FLO1P32768 1537 aa5.1□□□□□ -1.59
CAF4YKR036C HEM1P09950 548 aaPredicted RBP5.1□□□□□ -1.59
CAF4YKR036C SWI4P25302 1093 aaKnown RBP5.1□□□□□ -1.59
CAF4YKR036C RPC25P35718 212 aa5.1□□□□□ -1.59
CAF4YKR036C YBR032WP38223 100 aa5.1□□□□□ -1.59
CAF4YKR036C ERP5P38819 212 aa5.1□□□□□ -1.59
CAF4YKR036C ALG5P40350 334 aa5.1□□□□□ -1.59
CAF4YKR036C EMW1P42842 904 aaKnown RBP5.1□□□□□ -1.59
CAF4YKR036C FMP33P46998 180 aa5.1□□□□□ -1.59
CAF4YKR036C UBP15P50101 1230 aa5.1□□□□□ -1.59
CAF4YKR036C YMR111CQ04461 462 aaPredicted RBP5.1□□□□□ -1.59
CAF4YKR036C YML082WQ04533 649 aaKnown RBP5.1□□□□□ -1.59
CAF4YKR036C RPN8Q08723 338 aaKnown RBP5.1□□□□□ -1.59
CAF4YKR036C ICL2Q12031 575 aa5.1□□□□□ -1.59
CAF4YKR036C GET3Q12154 354 aaKnown RBP5.1□□□□□ -1.59
CAF4YKR036C TRM11Q12463 433 aa5.1□□□□□ -1.59
CAF4YKR036C HIS3P06633 220 aa5.09□□□□□ -1.59
CAF4YKR036C ERG11P10614 530 aa5.09□□□□□ -1.59
CAF4YKR036C HIR1P32479 840 aa5.09□□□□□ -1.59
CAF4YKR036C YME1P32795 747 aa5.09□□□□□ -1.59
CAF4YKR036C YLF2P38746 405 aa5.09□□□□□ -1.59
CAF4YKR036C VMA22P38784 181 aa5.09□□□□□ -1.59
CAF4YKR036C AKR1P39010 764 aa5.09□□□□□ -1.59
CAF4YKR036C SPC72P39723 622 aa5.09□□□□□ -1.59
CAF4YKR036C MXR1P40029 184 aa5.09□□□□□ -1.59
CAF4YKR036C YGR266WP53326 701 aa5.09□□□□□ -1.59
CAF4YKR036C BNI4P53858 892 aa5.09□□□□□ -1.59
CAF4YKR036C UBP2Q01476 1272 aa5.09□□□□□ -1.59
CAF4YKR036C SWP1Q02795 286 aa5.09□□□□□ -1.59
CAF4YKR036C LGE1Q02796 332 aaKnown RBP5.09□□□□□ -1.59
CAF4YKR036C DIG1Q03063 452 aaKnown RBP5.09□□□□□ -1.59
CAF4YKR036C HMO1Q03973 246 aaKnown RBP5.09□□□□□ -1.59
CAF4YKR036C RGA2Q06407 1009 aa5.09□□□□□ -1.59
CAF4YKR036C YOL075CQ08234 1294 aa5.09□□□□□ -1.59
CAF4YKR036C YIG1Q08956 461 aa5.09□□□□□ -1.59
CAF4YKR036C LAP2Q10740 671 aa5.09□□□□□ -1.59
CAF4YKR036C BBP1Q12365 385 aa5.09□□□□□ -1.59
CAF4YKR036C SEY1Q99287 776 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms