RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W YEL076CP39971 216 aa5.32□□□□□ -1.56
VPS29YHR012W YFL034WP43564 1073 aa5.32□□□□□ -1.56
VPS29YHR012W VTC2P43585 828 aa5.32□□□□□ -1.56
VPS29YHR012W TAF1P46677 1066 aa5.32□□□□□ -1.56
VPS29YHR012W FYV8P46949 817 aaKnown RBP5.32□□□□□ -1.56
VPS29YHR012W VPS25P47142 202 aa5.32□□□□□ -1.56
VPS29YHR012W CUE3P53137 624 aaKnown RBP5.32□□□□□ -1.56
VPS29YHR012W GUP1P53154 560 aa5.32□□□□□ -1.56
VPS29YHR012W NOP13P53883 403 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
VPS29YHR012W EEB1Q02891 456 aa5.32□□□□□ -1.56
VPS29YHR012W TIF35Q04067 274 aaKnown RBP5.32□□□□□ -1.56
VPS29YHR012W SPE3Q12074 293 aaKnown RBP5.32□□□□□ -1.56
VPS29YHR012W HIS5P07172 385 aa5.31□□□□□ -1.56
VPS29YHR012W PHO8P11491 566 aa5.31□□□□□ -1.56
VPS29YHR012W TAF13P11747 167 aa5.31□□□□□ -1.56
VPS29YHR012W ISY1P21374 235 aaPredicted RBP5.31□□□□□ -1.56
VPS29YHR012W PEX1P24004 1043 aa5.31□□□□□ -1.56
VPS29YHR012W COY1P34237 679 aa5.31□□□□□ -1.56
VPS29YHR012W GLY1P37303 387 aaKnown RBP5.31□□□□□ -1.56
VPS29YHR012W PCM1P38628 557 aaKnown RBP5.31□□□□□ -1.56
VPS29YHR012W ARP1P38696 384 aa5.31□□□□□ -1.56
VPS29YHR012W FMO1P38866 432 aa5.31□□□□□ -1.56
VPS29YHR012W RSM26P47141 266 aa5.31□□□□□ -1.56
VPS29YHR012W PEX14P53112 341 aa5.31□□□□□ -1.56
VPS29YHR012W TAM41P53230 385 aa5.31□□□□□ -1.56
VPS29YHR012W ENV11P53246 860 aa5.31□□□□□ -1.56
VPS29YHR012W TOF1P53840 1238 aa5.31□□□□□ -1.56
VPS29YHR012W ARK1P53974 638 aa5.31□□□□□ -1.56
VPS29YHR012W STP1Q00947 519 aa5.31□□□□□ -1.56
VPS29YHR012W ADA2Q02336 434 aa5.31□□□□□ -1.56
VPS29YHR012W UTP14Q04500 899 aaKnown RBP5.31□□□□□ -1.56
VPS29YHR012W SHS1Q07657 551 aa5.31□□□□□ -1.56
VPS29YHR012W NSE1Q07913 336 aa5.31□□□□□ -1.56
VPS29YHR012W TAF10Q12030 206 aa5.31□□□□□ -1.56
VPS29YHR012W PTC5Q12511 572 aa5.31□□□□□ -1.56
VPS29YHR012W ZPS1Q12512 249 aa5.31□□□□□ -1.56
VPS29YHR012W SEN1Q00416 2231 aaKnown RBP5.31□□□□□ -1.56
VPS29YHR012W BEM2P39960 2167 aaKnown RBP5.31□□□□□ -1.56
VPS29YHR012W CIT2P08679 460 aa5.3□□□□□ -1.56
VPS29YHR012W RGP1P16664 663 aa5.3□□□□□ -1.56
VPS29YHR012W PEX34P25584 144 aa5.3□□□□□ -1.56
VPS29YHR012W YKL097CP34245 136 aa5.3□□□□□ -1.56
VPS29YHR012W KDX1P36005 433 aa5.3□□□□□ -1.56
VPS29YHR012W SHE3P38272 425 aaKnown RBP5.3□□□□□ -1.56
VPS29YHR012W ERC1P38767 581 aa5.3□□□□□ -1.56
VPS29YHR012W YHR054CP38780 354 aa5.3□□□□□ -1.56
VPS29YHR012W POL31P46957 487 aa5.3□□□□□ -1.56
VPS29YHR012W ORC5P50874 479 aa5.3□□□□□ -1.56
VPS29YHR012W MFB1Q04922 465 aa5.3□□□□□ -1.56
VPS29YHR012W YPL277CQ08989 487 aa5.3□□□□□ -1.56
VPS29YHR012W CTF3Q12748 733 aa5.3□□□□□ -1.56
VPS29YHR012W HIS4P00815 799 aaKnown RBP5.29□□□□□ -1.56
VPS29YHR012W CPA2P03965 1118 aaKnown RBP5.29□□□□□ -1.56
VPS29YHR012W GAL80P04387 435 aa5.29□□□□□ -1.56
VPS29YHR012W FUS1P11710 512 aa5.29□□□□□ -1.56
VPS29YHR012W NAT1P12945 854 aaKnown RBP5.29□□□□□ -1.56
VPS29YHR012W PDE1P22434 369 aa5.29□□□□□ -1.56
VPS29YHR012W HCM1P25364 564 aa5.29□□□□□ -1.56
VPS29YHR012W SGF29P25554 259 aa5.29□□□□□ -1.56
VPS29YHR012W PSE1P32337 1089 aaKnown RBP5.29□□□□□ -1.56
VPS29YHR012W PEX2P32800 271 aa5.29□□□□□ -1.56
VPS29YHR012W TSA1P34760 196 aaKnown RBP5.29□□□□□ -1.56
VPS29YHR012W YKL023WP36103 277 aaKnown RBP5.29□□□□□ -1.56
VPS29YHR012W MAL33P38157 468 aa5.29□□□□□ -1.56
VPS29YHR012W YBL036CP38197 257 aa5.29□□□□□ -1.56
VPS29YHR012W UBP5P39944 805 aa5.29□□□□□ -1.56
VPS29YHR012W CCM1P48237 864 aaPredicted RBP5.29□□□□□ -1.56
VPS29YHR012W STB4P50104 949 aa5.29□□□□□ -1.56
VPS29YHR012W PSP1P50896 841 aaKnown RBP5.29□□□□□ -1.56
VPS29YHR012W SCW11P53189 542 aa5.29□□□□□ -1.56
VPS29YHR012W SPC98P53540 846 aa5.29□□□□□ -1.56
VPS29YHR012W SFB2P53953 876 aa5.29□□□□□ -1.56
VPS29YHR012W HPF1Q05164 967 aa5.29□□□□□ -1.56
VPS29YHR012W CDC53Q12018 815 aaKnown RBP5.29□□□□□ -1.56
VPS29YHR012W LAA1P39526 2014 aa5.28□□□□□ -1.56
VPS29YHR012W ASP3-2P0CX77 362 aa5.28□□□□□ -1.56
VPS29YHR012W ASP3-3P0CX78 362 aa5.28□□□□□ -1.56
VPS29YHR012W ASP3-4P0CX79 362 aa5.28□□□□□ -1.56
VPS29YHR012W ASP3-1P0CZ17 362 aa5.28□□□□□ -1.56
VPS29YHR012W BMH1P29311 267 aaKnown RBP5.28□□□□□ -1.56
VPS29YHR012W SEG2P34250 1132 aa5.28□□□□□ -1.56
VPS29YHR012W PPS1P38148 807 aa5.28□□□□□ -1.56
VPS29YHR012W NPP2P39997 493 aa5.28□□□□□ -1.56
VPS29YHR012W BIM1P40013 344 aa5.28□□□□□ -1.56
VPS29YHR012W BTT1P40314 149 aaPredicted RBP5.28□□□□□ -1.56
VPS29YHR012W SHQ1P40486 507 aaPredicted RBP5.28□□□□□ -1.56
VPS29YHR012W ASN1P49089 572 aaKnown RBP5.28□□□□□ -1.56
VPS29YHR012W IMP4P53941 290 aaKnown RBP5.28□□□□□ -1.56
VPS29YHR012W LEA1Q08963 238 aaPredicted RBP5.28□□□□□ -1.56
VPS29YHR012W APM4Q99186 491 aa5.28□□□□□ -1.56
VPS29YHR012W TRP2P00899 507 aaKnown RBP5.27□□□□□ -1.57
VPS29YHR012W HOM2P13663 365 aaKnown RBP5.27□□□□□ -1.57
VPS29YHR012W URA1P28272 314 aaPredicted RBP5.27□□□□□ -1.57
VPS29YHR012W MET4P32389 672 aa5.27□□□□□ -1.57
VPS29YHR012W CSE1P33307 960 aa5.27□□□□□ -1.57
VPS29YHR012W SLA2P33338 968 aa5.27□□□□□ -1.57
VPS29YHR012W PRX1P34227 261 aaKnown RBP5.27□□□□□ -1.57
VPS29YHR012W TBS1P38114 1094 aa5.27□□□□□ -1.57
VPS29YHR012W YBR284WP38150 797 aa5.27□□□□□ -1.57
VPS29YHR012W FTR1P40088 404 aa5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms