RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeastyeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC7YDL017W PUF3Q07807 879 aaKnown RBP RIP-Chip data7.52□□□□□ -1.2not detected
CDC7YDL017W AI5_BETAQ9ZZX0 354 aa7.52□□□□□ -1.2
CDC7YDL017W ARG4P04076 463 aaPredicted RBP7.52□□□□□ -1.21
CDC7YDL017W KIN82P25341 720 aa7.52□□□□□ -1.21
CDC7YDL017W YUR1P26725 428 aa7.52□□□□□ -1.21
CDC7YDL017W DBF4P32325 704 aa7.52□□□□□ -1.21
CDC7YDL017W GCD6P32501 712 aaKnown RBP7.52□□□□□ -1.21
CDC7YDL017W CBF2P32504 956 aa7.52□□□□□ -1.21
CDC7YDL017W YBL055CP34220 418 aaPredicted RBP7.52□□□□□ -1.21
CDC7YDL017W GDT1P38301 280 aaPredicted RBP7.52□□□□□ -1.21
CDC7YDL017W DYS1P38791 387 aa7.52□□□□□ -1.21
CDC7YDL017W UTP6Q02354 440 aaKnown RBP7.52□□□□□ -1.21
CDC7YDL017W ERV41Q04651 352 aa7.52□□□□□ -1.21
CDC7YDL017W ECM7Q06200 448 aa7.52□□□□□ -1.21
CDC7YDL017W YLL058WQ12198 575 aa7.52□□□□□ -1.21
CDC7YDL017W TRM11Q12463 433 aa7.52□□□□□ -1.21
CDC7YDL017W YDR461C-AQ2V2P7 80 aa7.52□□□□□ -1.21
CDC7YDL017W COX11P19516 300 aaKnown RBP7.51□□□□□ -1.21
CDC7YDL017W CLB1P24868 471 aa7.51□□□□□ -1.21
CDC7YDL017W ECM2P38241 364 aaKnown RBP7.51□□□□□ -1.21
CDC7YDL017W TIF5P38431 405 aaKnown RBP7.51□□□□□ -1.21
CDC7YDL017W SCD6P45978 349 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
CDC7YDL017W DAS1P47005 663 aa7.51□□□□□ -1.21
CDC7YDL017W SCY1P53009 804 aa7.51□□□□□ -1.21
CDC7YDL017W DRN1P53255 507 aaKnown RBP7.51□□□□□ -1.21
CDC7YDL017W RPL22BP56628 122 aaKnown RBP7.51□□□□□ -1.21
CDC7YDL017W STE20Q03497 939 aaKnown RBP7.51□□□□□ -1.21
CDC7YDL017W TRS130Q03660 1102 aa7.51□□□□□ -1.21
CDC7YDL017W MSC6Q08818 692 aaKnown RBP7.51□□□□□ -1.21
CDC7YDL017W HIF1Q12373 385 aa7.51□□□□□ -1.21
CDC7YDL017W ECM3Q99252 613 aa7.51□□□□□ -1.21
CDC7YDL017W BI2P03873 423 aa7.5□□□□□ -1.21
CDC7YDL017W BI4P03879 638 aa7.5□□□□□ -1.21
CDC7YDL017W ADE3P07245 946 aaKnown RBP7.5□□□□□ -1.21
CDC7YDL017W PEP5P12868 1029 aa7.5□□□□□ -1.21
CDC7YDL017W PLC1P32383 869 aa7.5□□□□□ -1.21
CDC7YDL017W SLD2P34252 453 aa7.5□□□□□ -1.21
CDC7YDL017W CCT2P39076 527 aaKnown RBP7.5□□□□□ -1.21
CDC7YDL017W SAP185P40856 1058 aa7.5□□□□□ -1.21
CDC7YDL017W PSP2P50109 593 aaKnown RBP7.5□□□□□ -1.21
CDC7YDL017W SCS3P53012 380 aa7.5□□□□□ -1.21
CDC7YDL017W MNP1P53163 194 aaPredicted RBP7.5□□□□□ -1.21
CDC7YDL017W PUS2P53167 370 aa7.5□□□□□ -1.21
CDC7YDL017W BI3Q9ZZW7 517 aa7.5□□□□□ -1.21
CDC7YDL017W HVG1P0CE11 249 aa7.49□□□□□ -1.21
CDC7YDL017W ADH4P10127 382 aa7.49□□□□□ -1.21
CDC7YDL017W EST1P17214 699 aaPredicted RBP7.49□□□□□ -1.21
CDC7YDL017W SFL1P20134 766 aa7.49□□□□□ -1.21
CDC7YDL017W TMT1P32643 299 aa7.49□□□□□ -1.21
CDC7YDL017W VID24P38263 362 aa7.49□□□□□ -1.21
CDC7YDL017W GUA1P38625 525 aaKnown RBP7.49□□□□□ -1.21
CDC7YDL017W PMC1P38929 1173 aaPredicted RBP7.49□□□□□ -1.21
CDC7YDL017W SMX2P40204 77 aaKnown RBP7.49□□□□□ -1.21
CDC7YDL017W SBE2P42223 864 aaKnown RBP7.49□□□□□ -1.21
CDC7YDL017W ACF4P47129 309 aa7.49□□□□□ -1.21
CDC7YDL017W YMR102CQ03177 834 aa7.49□□□□□ -1.21
CDC7YDL017W JIP4Q03361 876 aa7.49□□□□□ -1.21
CDC7YDL017W ABP140Q08641 628 aaKnown RBP7.49□□□□□ -1.21
CDC7YDL017W TY3A-GQ12173 290 aa7.49□□□□□ -1.21
CDC7YDL017W TY3A-IQ99219 290 aa7.49□□□□□ -1.21
CDC7YDL017W PUF4P25339 888 aaKnown RBP RIP-Chip data7.48□□□□□ -1.21not detected
CDC7YDL017W RRT12P25381 491 aa7.48□□□□□ -1.21
CDC7YDL017W YME1P32795 747 aa7.48□□□□□ -1.21
CDC7YDL017W RGT1P32862 1170 aa7.48□□□□□ -1.21
CDC7YDL017W OAF3P36023 863 aa7.48□□□□□ -1.21
CDC7YDL017W PBP2P38151 413 aaKnown RBP RIP-Chip data7.48□□□□□ -1.21not detected
CDC7YDL017W MAP2P38174 421 aaKnown RBP7.48□□□□□ -1.21
CDC7YDL017W MMS4P38257 691 aa7.48□□□□□ -1.21
CDC7YDL017W MSG5P38590 489 aa7.48□□□□□ -1.21
CDC7YDL017W AIM21P40563 679 aa7.48□□□□□ -1.21
CDC7YDL017W INA22P40576 216 aa7.48□□□□□ -1.21
CDC7YDL017W TRS85P46944 698 aa7.48□□□□□ -1.21
CDC7YDL017W JJJ3P47138 172 aa7.48□□□□□ -1.21
CDC7YDL017W USA1Q03714 838 aa7.48□□□□□ -1.21
CDC7YDL017W UFO1Q04511 668 aa7.48□□□□□ -1.21
CDC7YDL017W PNP1Q05788 311 aa7.48□□□□□ -1.21
CDC7YDL017W SHS1Q07657 551 aa7.48□□□□□ -1.21
CDC7YDL017W FRA1Q07825 749 aa7.48□□□□□ -1.21
CDC7YDL017W HFI1Q12060 488 aa7.48□□□□□ -1.21
CDC7YDL017W YER152CP10356 443 aa7.47□□□□□ -1.21
CDC7YDL017W PRE10P21242 288 aaKnown RBP RIP-Chip data7.47□□□□□ -1.21not detected
CDC7YDL017W ILV6P25605 309 aaKnown RBP7.47□□□□□ -1.21
CDC7YDL017W ABD1P32783 436 aaPredicted RBP7.47□□□□□ -1.21
CDC7YDL017W SMY2P32909 740 aaKnown RBP7.47□□□□□ -1.21
CDC7YDL017W ASH1P34233 588 aa7.47□□□□□ -1.21
CDC7YDL017W FLR1P38124 548 aa7.47□□□□□ -1.21
CDC7YDL017W VHC1P38329 1120 aa7.47□□□□□ -1.21
CDC7YDL017W BSD2P38356 321 aa7.47□□□□□ -1.21
CDC7YDL017W ATG36P46983 293 aa7.47□□□□□ -1.21
CDC7YDL017W ZAP1P47043 880 aa7.47□□□□□ -1.21
CDC7YDL017W URB2P47108 1174 aa7.47□□□□□ -1.21
CDC7YDL017W PEX21P50091 288 aa7.47□□□□□ -1.21
CDC7YDL017W ACM1Q08981 209 aa7.47□□□□□ -1.21
CDC7YDL017W SGT2Q12118 346 aaKnown RBP7.47□□□□□ -1.21
CDC7YDL017W YOL087CQ99247 1116 aa7.47□□□□□ -1.21
CDC7YDL017W SEY1Q99287 776 aa7.47□□□□□ -1.21
CDC7YDL017W YML002WP0CF17 737 aa7.47□□□□□ -1.21
CDC7YDL017W ASP3-2P0CX77 362 aa7.47□□□□□ -1.21
CDC7YDL017W ASP3-3P0CX78 362 aa7.47□□□□□ -1.21
CDC7YDL017W ASP3-4P0CX79 362 aa7.47□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms