RNA–Protein interactions for RNA: YBR273C

UBX7, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeast

Gene UBX7, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBX7	YBR273C	GCD6	P32501	712 aa	Known RBP	5.16	□□□□□ -1.58
UBX7	YBR273C	YBL055C	P34220	418 aa	Predicted RBP	5.16	□□□□□ -1.58
UBX7	YBR273C	EXO5	P38289	585 aa		5.16	□□□□□ -1.58
UBX7	YBR273C	SHC1	P39000	512 aa		5.16	□□□□□ -1.58
UBX7	YBR273C	UTP7	P40055	554 aa	Known RBP	5.16	□□□□□ -1.58
UBX7	YBR273C	VPS70	P47161	811 aa		5.16	□□□□□ -1.58
UBX7	YBR273C	MTC3	P53077	123 aa		5.16	□□□□□ -1.58
UBX7	YBR273C	DIP5	P53388	608 aa		5.16	□□□□□ -1.58
UBX7	YBR273C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	not detected
UBX7	YBR273C	PRP3	Q03338	469 aa	Predicted RBP	5.16	□□□□□ -1.58
UBX7	YBR273C	MSH6	Q03834	1242 aa		5.16	□□□□□ -1.58
UBX7	YBR273C	TMA64	Q04600	565 aa	Known RBP	5.16	□□□□□ -1.58
UBX7	YBR273C	TAF9	Q05027	157 aa		5.16	□□□□□ -1.58
UBX7	YBR273C	PNP1	Q05788	311 aa		5.16	□□□□□ -1.58
UBX7	YBR273C	WHI4	Q07655	649 aa	Known RBP	5.16	□□□□□ -1.58
UBX7	YBR273C	GUD1	Q07729	489 aa		5.16	□□□□□ -1.58
UBX7	YBR273C	TUB2	P02557	457 aa	Known RBP	5.15	□□□□□ -1.59
UBX7	YBR273C	PRT1	P06103	763 aa	Known RBP	5.15	□□□□□ -1.59
UBX7	YBR273C	YML002W	P0CF17	737 aa		5.15	□□□□□ -1.59
UBX7	YBR273C	YMR085W	P0CF18	432 aa		5.15	□□□□□ -1.59
UBX7	YBR273C	KRS1	P15180	591 aa	Known RBP	5.15	□□□□□ -1.59
UBX7	YBR273C	SFL1	P20134	766 aa		5.15	□□□□□ -1.59
UBX7	YBR273C	DBP5	P20449	482 aa	Known RBP	5.15	□□□□□ -1.59
UBX7	YBR273C	ESS1	P22696	170 aa		5.15	□□□□□ -1.59
UBX7	YBR273C	SPT5	P27692	1063 aa	Known RBP	5.15	□□□□□ -1.59
UBX7	YBR273C	ICL1	P28240	557 aa	Predicted RBP	5.15	□□□□□ -1.59
UBX7	YBR273C	CDC11	P32458	415 aa		5.15	□□□□□ -1.59
UBX7	YBR273C	SET3	P36124	751 aa		5.15	□□□□□ -1.59
UBX7	YBR273C	PHO88	P38264	188 aa	Predicted RBP	5.15	□□□□□ -1.59
UBX7	YBR273C	VHC1	P38329	1120 aa		5.15	□□□□□ -1.59
UBX7	YBR273C	MSG5	P38590	489 aa		5.15	□□□□□ -1.59
UBX7	YBR273C	TMA22	P47089	198 aa	Predicted RBP	5.15	□□□□□ -1.59
UBX7	YBR273C	HUL5	P53119	910 aa		5.15	□□□□□ -1.59
UBX7	YBR273C	SHE9	Q04172	456 aa		5.15	□□□□□ -1.59
UBX7	YBR273C	SUB2	Q07478	446 aa	Known RBP	5.15	□□□□□ -1.59
UBX7	YBR273C	ADE3	P07245	946 aa	Known RBP	5.14	□□□□□ -1.59
UBX7	YBR273C	GCR1	P07261	785 aa		5.14	□□□□□ -1.59
UBX7	YBR273C	ILV2	P07342	687 aa	Known RBP	5.14	□□□□□ -1.59
UBX7	YBR273C	PRP4	P20053	465 aa	Known RBP	5.14	□□□□□ -1.59
UBX7	YBR273C	CAP1	P28495	268 aa	Known RBP	5.14	□□□□□ -1.59
UBX7	YBR273C	MUD1	P32605	298 aa	Known RBP	5.14	□□□□□ -1.59
UBX7	YBR273C	MRE11	P32829	692 aa		5.14	□□□□□ -1.59
UBX7	YBR273C	TRM2	P33753	639 aa		5.14	□□□□□ -1.59
UBX7	YBR273C	UBP11	P36026	717 aa		5.14	□□□□□ -1.59
UBX7	YBR273C	CCL1	P37366	393 aa		5.14	□□□□□ -1.59
UBX7	YBR273C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
UBX7	YBR273C	NCL1	P38205	684 aa	Known RBP	5.14	□□□□□ -1.59
UBX7	YBR273C	POP4	P38336	279 aa		5.14	□□□□□ -1.59
UBX7	YBR273C	NDT80	P38830	627 aa		5.14	□□□□□ -1.59
UBX7	YBR273C	NPP2	P39997	493 aa		5.14	□□□□□ -1.59
UBX7	YBR273C	YMR134W	P40207	237 aa		5.14	□□□□□ -1.59
UBX7	YBR273C	SIP5	P40210	489 aa	Known RBP	5.14	□□□□□ -1.59
UBX7	YBR273C	ULP2	P40537	1034 aa	Predicted RBP	5.14	□□□□□ -1.59
UBX7	YBR273C	ARK1	P53974	638 aa		5.14	□□□□□ -1.59
UBX7	YBR273C	RPA49	Q01080	415 aa	Predicted RBP	5.14	□□□□□ -1.59
UBX7	YBR273C	LCB5	Q06147	687 aa	Known RBP	5.14	□□□□□ -1.59
UBX7	YBR273C	YLR177W	Q06251	628 aa		5.14	□□□□□ -1.59
UBX7	YBR273C	BUD20	Q08004	166 aa	Predicted RBP	5.14	□□□□□ -1.59
UBX7	YBR273C	VHS3	Q08438	674 aa		5.14	□□□□□ -1.59
UBX7	YBR273C	CDC53	Q12018	815 aa	Known RBP	5.14	□□□□□ -1.59
UBX7	YBR273C	RAD18	P10862	487 aa		5.13	□□□□□ -1.59
UBX7	YBR273C	HEM15	P16622	393 aa		5.13	□□□□□ -1.59
UBX7	YBR273C	KAR3	P17119	729 aa		5.13	□□□□□ -1.59
UBX7	YBR273C	VMA4	P22203	233 aa	Known RBP	5.13	□□□□□ -1.59
UBX7	YBR273C	MSM1	P22438	575 aa		5.13	□□□□□ -1.59
UBX7	YBR273C	MVD1	P32377	396 aa	Known RBP	5.13	□□□□□ -1.59
UBX7	YBR273C	COT1	P32798	439 aa		5.13	□□□□□ -1.59
UBX7	YBR273C	ATG19	P35193	415 aa		5.13	□□□□□ -1.59
UBX7	YBR273C	YBR062C	P38239	180 aa		5.13	□□□□□ -1.59
UBX7	YBR273C	FZO1	P38297	855 aa		5.13	□□□□□ -1.59
UBX7	YBR273C	HSM3	P38348	480 aa		5.13	□□□□□ -1.59
UBX7	YBR273C	REV7	P38927	245 aa		5.13	□□□□□ -1.59
UBX7	YBR273C	YER156C	P40093	338 aa	Known RBP	5.13	□□□□□ -1.59
UBX7	YBR273C	TAF6	P53040	516 aa		5.13	□□□□□ -1.59
UBX7	YBR273C	SHE10	P53075	577 aa		5.13	□□□□□ -1.59
UBX7	YBR273C	PTA1	Q01329	785 aa	Predicted RBP	5.13	□□□□□ -1.59
UBX7	YBR273C	TFB2	Q02939	513 aa		5.13	□□□□□ -1.59
UBX7	YBR273C	YMR027W	Q04371	470 aa		5.13	□□□□□ -1.59
UBX7	YBR273C	YDR222W	Q04925	415 aa		5.13	□□□□□ -1.59
UBX7	YBR273C	TDA5	Q06417	326 aa	Known RBP	5.13	□□□□□ -1.59
UBX7	YBR273C	GPN2	Q08726	347 aa	Predicted RBP	5.13	□□□□□ -1.59
UBX7	YBR273C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
UBX7	YBR273C	RAD3	P06839	778 aa		5.12	□□□□□ -1.59
UBX7	YBR273C	SPT2	P06843	333 aa	Predicted RBP	5.12	□□□□□ -1.59
UBX7	YBR273C	TUB3	P09734	445 aa	Known RBP	5.12	□□□□□ -1.59
UBX7	YBR273C	MRPS28	P21771	286 aa		5.12	□□□□□ -1.59
UBX7	YBR273C	SEC14	P24280	304 aa	Known RBP	5.12	□□□□□ -1.59
UBX7	YBR273C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
UBX7	YBR273C	PER1	P25625	357 aa		5.12	□□□□□ -1.59
UBX7	YBR273C	BUD14	P27637	709 aa		5.12	□□□□□ -1.59
UBX7	YBR273C	TOA1	P32773	286 aa		5.12	□□□□□ -1.59
UBX7	YBR273C	ABD1	P32783	436 aa	Predicted RBP	5.12	□□□□□ -1.59
UBX7	YBR273C	SWE1	P32944	819 aa		5.12	□□□□□ -1.59
UBX7	YBR273C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
UBX7	YBR273C	STE13	P33894	931 aa		5.12	□□□□□ -1.59
UBX7	YBR273C	TGL1	P34163	548 aa		5.12	□□□□□ -1.59
UBX7	YBR273C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
UBX7	YBR273C	CSG2	P35206	410 aa		5.12	□□□□□ -1.59
UBX7	YBR273C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
UBX7	YBR273C	PCA1	P38360	1216 aa		5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms