RNA–Protein interactions for RNA: YFR034C

PHO4, Transcript of Basic helix-loop-helix (bHLH) transcription factor of the myc-family, yeastyeast

Gene PHO4, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO4YFR034C RPA49Q01080 415 aaPredicted RBP13.81□□□□□ -0.2
PHO4YFR034C YDR090CQ03193 310 aa13.81□□□□□ -0.2
PHO4YFR034C VTI1Q04338 217 aa13.81□□□□□ -0.2
PHO4YFR034C RGA2Q06407 1009 aa13.81□□□□□ -0.2
PHO4YFR034C NOP6Q07623 225 aaKnown RBP13.81□□□□□ -0.2
PHO4YFR034C YKL068W-AQ3E826 78 aa13.81□□□□□ -0.2
PHO4YFR034C DPH2P32461 534 aa13.8□□□□□ -0.2
PHO4YFR034C NFU1P32860 256 aa13.8□□□□□ -0.2
PHO4YFR034C TIM23P32897 222 aa13.8□□□□□ -0.2
PHO4YFR034C GUA1P38625 525 aaKnown RBP13.8□□□□□ -0.2
PHO4YFR034C RSC30P38781 883 aa13.8□□□□□ -0.2
PHO4YFR034C FTR1P40088 404 aa13.8□□□□□ -0.2
PHO4YFR034C CPR7P47103 393 aa13.8□□□□□ -0.2
PHO4YFR034C SCS3P53012 380 aa13.8□□□□□ -0.2
PHO4YFR034C TBF1Q02457 562 aa13.8□□□□□ -0.2
PHO4YFR034C URH1Q04179 340 aa13.8□□□□□ -0.2
PHO4YFR034C IWR1Q07532 353 aaPredicted RBP13.8□□□□□ -0.2
PHO4YFR034C CDC8P00572 216 aa13.79□□□□□ -0.2
PHO4YFR034C SPT2P06843 333 aaPredicted RBP13.79□□□□□ -0.2
PHO4YFR034C CBF2P32504 956 aa13.79□□□□□ -0.2
PHO4YFR034C GCG1P32656 232 aaKnown RBP13.79□□□□□ -0.2
PHO4YFR034C MRX3P38172 270 aa13.79□□□□□ -0.2
PHO4YFR034C MVP1P40959 511 aaKnown RBP13.79□□□□□ -0.2
PHO4YFR034C SCD6P45978 349 aaKnown RBP RIP-Chip data13.79□□□□□ -0.2not detected
PHO4YFR034C ACF4P47129 309 aa13.79□□□□□ -0.2
PHO4YFR034C ATG1P53104 897 aa13.79□□□□□ -0.2
PHO4YFR034C CEF1Q03654 590 aaPredicted RBP13.79□□□□□ -0.2
PHO4YFR034C HIF1Q12373 385 aa13.79□□□□□ -0.2
PHO4YFR034C ZRT2Q12436 422 aa13.79□□□□□ -0.2
PHO4YFR034C POX1P13711 748 aa13.78□□□□□ -0.2
PHO4YFR034C DAL2P25335 343 aa13.78□□□□□ -0.2
PHO4YFR034C SMY2P32909 740 aaKnown RBP13.78□□□□□ -0.2
PHO4YFR034C FLR1P38124 548 aa13.78□□□□□ -0.2
PHO4YFR034C VID24P38263 362 aa13.78□□□□□ -0.2
PHO4YFR034C HIS2P38635 335 aa13.78□□□□□ -0.2
PHO4YFR034C MXR1P40029 184 aa13.78□□□□□ -0.2
PHO4YFR034C YTA12P40341 825 aa13.78□□□□□ -0.2
PHO4YFR034C MIC19P43594 170 aa13.78□□□□□ -0.2
PHO4YFR034C RPC17P47076 161 aa13.78□□□□□ -0.2
PHO4YFR034C TPO2P53283 614 aa13.78□□□□□ -0.2
PHO4YFR034C TRS130Q03660 1102 aa13.78□□□□□ -0.2
PHO4YFR034C PPM1Q04081 328 aa13.78□□□□□ -0.2
PHO4YFR034C ECM7Q06200 448 aa13.78□□□□□ -0.2
PHO4YFR034C MET7Q08645 548 aa13.78□□□□□ -0.2
PHO4YFR034C HFI1Q12060 488 aa13.78□□□□□ -0.2
PHO4YFR034C MOT1P32333 1867 aa13.78□□□□□ -0.2
PHO4YFR034C NAT1P12945 854 aaKnown RBP13.77□□□□□ -0.21
PHO4YFR034C CDC42P19073 191 aa13.77□□□□□ -0.21
PHO4YFR034C IME1P21190 360 aa13.77□□□□□ -0.21
PHO4YFR034C PRE10P21242 288 aaKnown RBP RIP-Chip data13.77□□□□□ -0.21not detected
PHO4YFR034C MOT2P34909 587 aaKnown RBP13.77□□□□□ -0.21
PHO4YFR034C SPC72P39723 622 aa13.77□□□□□ -0.21
PHO4YFR034C ECI1Q05871 280 aa13.77□□□□□ -0.21
PHO4YFR034C GIS3Q12418 502 aa13.77□□□□□ -0.21
PHO4YFR034C MAS2P11914 482 aa13.76□□□□□ -0.21
PHO4YFR034C CSG2P35206 410 aa13.76□□□□□ -0.21
PHO4YFR034C MNP1P53163 194 aaPredicted RBP13.76□□□□□ -0.21
PHO4YFR034C TMT1P32643 299 aa13.75□□□□□ -0.21
PHO4YFR034C LCP5P40079 357 aaPredicted RBP13.75□□□□□ -0.21
PHO4YFR034C JJJ3P47138 172 aa13.75□□□□□ -0.21
PHO4YFR034C BRO1P48582 844 aa13.75□□□□□ -0.21
PHO4YFR034C YGR111WP53265 400 aa13.75□□□□□ -0.21
PHO4YFR034C SHS1Q07657 551 aa13.75□□□□□ -0.21
PHO4YFR034C APL5Q08951 932 aaKnown RBP13.75□□□□□ -0.21
PHO4YFR034C SPO21Q12411 609 aa13.75□□□□□ -0.21
PHO4YFR034C AI5_BETAQ9ZZX0 354 aa13.75□□□□□ -0.21
PHO4YFR034C YLR462WO13556 202 aa13.74□□□□□ -0.21
PHO4YFR034C RPS3P05750 240 aaKnown RBP13.74□□□□□ -0.21
PHO4YFR034C RRN6P32786 894 aa13.74□□□□□ -0.21
PHO4YFR034C MUD2P36084 527 aaKnown RBP13.74□□□□□ -0.21
PHO4YFR034C NCL1P38205 684 aaKnown RBP13.74□□□□□ -0.21
PHO4YFR034C MMS4P38257 691 aa13.74□□□□□ -0.21
PHO4YFR034C RRT2P38332 387 aa13.74□□□□□ -0.21
PHO4YFR034C YHL049CP38722 271 aa13.74□□□□□ -0.21
PHO4YFR034C YEL075CP39972 122 aa13.74□□□□□ -0.21
PHO4YFR034C YER189WP40104 122 aa13.74□□□□□ -0.21
PHO4YFR034C YFL064CP43540 174 aa13.74□□□□□ -0.21
PHO4YFR034C DAS1P47005 663 aa13.74□□□□□ -0.21
PHO4YFR034C EEB1Q02891 456 aa13.74□□□□□ -0.21
PHO4YFR034C STE20Q03497 939 aaKnown RBP13.74□□□□□ -0.21
PHO4YFR034C YLR225CQ05948 407 aaKnown RBP13.74□□□□□ -0.21
PHO4YFR034C YBL111CQ3E7Y5 667 aa13.74□□□□□ -0.21
PHO4YFR034C COX11P19516 300 aaKnown RBP13.73□□□□□ -0.21
PHO4YFR034C RNR1P21524 888 aaKnown RBP13.73□□□□□ -0.21
PHO4YFR034C OLA1P38219 394 aaKnown RBP13.73□□□□□ -0.21
PHO4YFR034C KSP1P38691 1029 aaKnown RBP13.73□□□□□ -0.21
PHO4YFR034C DYS1P38791 387 aa13.73□□□□□ -0.21
PHO4YFR034C SBE2P42223 864 aaKnown RBP13.73□□□□□ -0.21
PHO4YFR034C PHO86P46956 311 aa13.73□□□□□ -0.21
PHO4YFR034C YMR1P47147 688 aaKnown RBP RIP-Chip data13.73□□□□□ -0.21not detected
PHO4YFR034C YDR222WQ04925 415 aa13.73□□□□□ -0.21
PHO4YFR034C AIM41Q12032 185 aa13.73□□□□□ -0.21
PHO4YFR034C RIO1Q12196 484 aaKnown RBP13.73□□□□□ -0.21
PHO4YFR034C SKG6P32900 734 aaPredicted RBP13.72□□□□□ -0.21
PHO4YFR034C DRN1P53255 507 aaKnown RBP13.72□□□□□ -0.21
PHO4YFR034C ECM3Q99252 613 aa13.72□□□□□ -0.21
PHO4YFR034C LAA1P39526 2014 aa13.72□□□□□ -0.21
PHO4YFR034C RIF1P29539 1916 aa13.71□□□□□ -0.21
PHO4YFR034C DBF4P32325 704 aa13.71□□□□□ -0.21
PHO4YFR034C GPT2P36148 743 aa13.71□□□□□ -0.21
Retrieved 100 of 5,963 RNA–protein pairs in 80.5 ms