RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C NCS2P53923 493 aaPredicted RBP4.93□□□□□ -1.62
PAN1YIR006C CIK1Q01649 594 aa4.93□□□□□ -1.62
PAN1YIR006C EEB1Q02891 456 aa4.93□□□□□ -1.62
PAN1YIR006C PRP42Q03776 544 aaKnown RBP4.93□□□□□ -1.62
PAN1YIR006C MYO5Q04439 1219 aaKnown RBP4.93□□□□□ -1.62
PAN1YIR006C POM152P39685 1337 aa4.93□□□□□ -1.62
PAN1YIR006C VMA2P16140 517 aaKnown RBP4.93□□□□□ -1.62
PAN1YIR006C ALG1P16661 449 aa4.93□□□□□ -1.62
PAN1YIR006C ARG1P22768 420 aa4.93□□□□□ -1.62
PAN1YIR006C SEC14P24280 304 aaKnown RBP4.93□□□□□ -1.62
PAN1YIR006C PBP2P38151 413 aaKnown RBP RIP-Chip data4.93□□□□□ -1.62not detected
PAN1YIR006C TDA11P38854 504 aa4.93□□□□□ -1.62
PAN1YIR006C YTA6P40328 754 aa4.93□□□□□ -1.62
PAN1YIR006C CSM2P40465 213 aa4.93□□□□□ -1.62
PAN1YIR006C HXT8P40886 569 aa4.93□□□□□ -1.62
PAN1YIR006C MMM1P41800 426 aa4.93□□□□□ -1.62
PAN1YIR006C CUE3P53137 624 aaKnown RBP4.93□□□□□ -1.62
PAN1YIR006C SHR3Q02774 210 aa4.93□□□□□ -1.62
PAN1YIR006C MFM1Q02783 413 aa4.93□□□□□ -1.62
PAN1YIR006C CRD1Q07560 283 aa4.93□□□□□ -1.62
PAN1YIR006C DAS2Q12084 232 aa4.93□□□□□ -1.62
PAN1YIR006C YRF1-1P0CX20 1796 aa4.93□□□□□ -1.62
PAN1YIR006C YRF1-5P0CX21 1796 aa4.93□□□□□ -1.62
PAN1YIR006C YRF1-8P0CX22 1796 aa4.93□□□□□ -1.62
PAN1YIR006C YLR462WO13556 202 aa4.93□□□□□ -1.62
PAN1YIR006C SNF1P06782 633 aaKnown RBP4.93□□□□□ -1.62
PAN1YIR006C LRE1P25579 583 aaKnown RBP4.93□□□□□ -1.62
PAN1YIR006C YKU70P32807 602 aa4.93□□□□□ -1.62
PAN1YIR006C PGM1P33401 570 aaKnown RBP4.93□□□□□ -1.62
PAN1YIR006C NPL4P33755 580 aa4.93□□□□□ -1.62
PAN1YIR006C HEK2P38199 381 aaKnown RBP RIP-Chip data4.93□□□□□ -1.62 RIP-Chip
PAN1YIR006C RRT2P38332 387 aa4.93□□□□□ -1.62
PAN1YIR006C YHL049CP38722 271 aa4.93□□□□□ -1.62
PAN1YIR006C BCD1P38772 366 aa4.93□□□□□ -1.62
PAN1YIR006C CCT3P39077 534 aaKnown RBP4.93□□□□□ -1.62
PAN1YIR006C YEL075CP39972 122 aa4.93□□□□□ -1.62
PAN1YIR006C YER189WP40104 122 aa4.93□□□□□ -1.62
PAN1YIR006C YIL001WP40560 513 aa4.93□□□□□ -1.62
PAN1YIR006C GCN20P43535 752 aaKnown RBP4.93□□□□□ -1.62
PAN1YIR006C YFL064CP43540 174 aa4.93□□□□□ -1.62
PAN1YIR006C VID30P53076 958 aa4.93□□□□□ -1.62
PAN1YIR006C TRM44Q02648 567 aaKnown RBP4.93□□□□□ -1.62
PAN1YIR006C HPT1Q04178 221 aaKnown RBP4.93□□□□□ -1.62
PAN1YIR006C YBL111CQ3E7Y5 667 aa4.93□□□□□ -1.62
PAN1YIR006C SRD1P09007 221 aa4.92□□□□□ -1.62
PAN1YIR006C SPC97P38863 823 aa4.92□□□□□ -1.62
PAN1YIR006C ICP55P40051 511 aa4.92□□□□□ -1.62
PAN1YIR006C UBP15P50101 1230 aa4.92□□□□□ -1.62
PAN1YIR006C TIM8P57744 87 aa4.92□□□□□ -1.62
PAN1YIR006C APC1P53886 1748 aa4.92□□□□□ -1.62
PAN1YIR006C MGT1P26188 188 aa4.92□□□□□ -1.62
PAN1YIR006C TFG1P41895 735 aaPredicted RBP4.92□□□□□ -1.62
PAN1YIR006C SHE10P53075 577 aa4.92□□□□□ -1.62
PAN1YIR006C IRC4Q03036 179 aa4.92□□□□□ -1.62
PAN1YIR006C YDR090CQ03193 310 aa4.92□□□□□ -1.62
PAN1YIR006C SEM1O94742 89 aa4.92□□□□□ -1.62
PAN1YIR006C RPL24AP04449 155 aaKnown RBP4.92□□□□□ -1.62
PAN1YIR006C PRT1P06103 763 aaKnown RBP4.92□□□□□ -1.62
PAN1YIR006C MRX3P38172 270 aa4.92□□□□□ -1.62
PAN1YIR006C YBP1P38315 674 aa4.92□□□□□ -1.62
PAN1YIR006C APE4P38821 490 aa4.92□□□□□ -1.62
PAN1YIR006C AIM21P40563 679 aa4.92□□□□□ -1.62
PAN1YIR006C CCT7P42943 550 aaKnown RBP4.92□□□□□ -1.62
PAN1YIR006C COS6P53344 381 aa4.92□□□□□ -1.62
PAN1YIR006C YDR338CQ05497 695 aa4.92□□□□□ -1.62
PAN1YIR006C PUF3Q07807 879 aaKnown RBP RIP-Chip data4.92□□□□□ -1.62not detected
PAN1YIR006C AAD15Q08361 143 aa4.92□□□□□ -1.62
PAN1YIR006C ADH4P10127 382 aa4.92□□□□□ -1.62
PAN1YIR006C CKA2P19454 339 aa4.92□□□□□ -1.62
PAN1YIR006C RAD57P25301 460 aa4.92□□□□□ -1.62
PAN1YIR006C SIN4P32259 974 aa4.92□□□□□ -1.62
PAN1YIR006C PDS1P40316 373 aaPredicted RBP4.92□□□□□ -1.62
PAN1YIR006C HSH155P49955 971 aaKnown RBP4.92□□□□□ -1.62
PAN1YIR006C PPN1Q04119 674 aa4.92□□□□□ -1.62
PAN1YIR006C YKU80Q04437 629 aa4.92□□□□□ -1.62
PAN1YIR006C UTP4Q06679 776 aaKnown RBP4.92□□□□□ -1.62
PAN1YIR006C CDC53Q12018 815 aaKnown RBP4.92□□□□□ -1.62
PAN1YIR006C PDC5P16467 563 aaKnown RBP4.91□□□□□ -1.62
PAN1YIR006C VPS1P21576 704 aaKnown RBP4.91□□□□□ -1.62
PAN1YIR006C PYC2P32327 1180 aaKnown RBP4.91□□□□□ -1.62
PAN1YIR006C AFG2P32794 780 aa4.91□□□□□ -1.62
PAN1YIR006C VHC1P38329 1120 aa4.91□□□□□ -1.62
PAN1YIR006C YJR079WP47126 109 aa4.91□□□□□ -1.62
PAN1YIR006C ULP1Q02724 621 aa4.91□□□□□ -1.62
PAN1YIR006C UBP16Q02863 499 aa4.91□□□□□ -1.62
PAN1YIR006C FAR8Q05040 523 aa4.91□□□□□ -1.62
PAN1YIR006C GPI13Q07830 1017 aa4.91□□□□□ -1.62
PAN1YIR006C LDB17Q12342 491 aa4.91□□□□□ -1.62
PAN1YIR006C ATG11Q12527 1178 aa4.91□□□□□ -1.62
PAN1YIR006C ARG4P04076 463 aaPredicted RBP4.91□□□□□ -1.62
PAN1YIR006C YBL055CP34220 418 aaPredicted RBP4.91□□□□□ -1.62
PAN1YIR006C RPA49Q01080 415 aaPredicted RBP4.91□□□□□ -1.62
PAN1YIR006C PNP1Q05788 311 aa4.91□□□□□ -1.62
PAN1YIR006C ECI1Q05871 280 aa4.91□□□□□ -1.62
PAN1YIR006C ERG12P07277 443 aa4.91□□□□□ -1.62
PAN1YIR006C CLN3P13365 580 aa4.91□□□□□ -1.62
PAN1YIR006C VMA1P17255 1071 aaKnown RBP4.91□□□□□ -1.62
PAN1YIR006C GAL11P19659 1081 aa4.91□□□□□ -1.62
PAN1YIR006C MEI5P32489 222 aa4.91□□□□□ -1.62
PAN1YIR006C MUD2P36084 527 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms