RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W TIM8P57744 87 aa5.96□□□□□ -1.46
SHE10YGL228W VTC3Q02725 835 aa5.96□□□□□ -1.46
SHE10YGL228W ATG11Q12527 1178 aa5.96□□□□□ -1.46
SHE10YGL228W UBR2Q07963 1872 aa5.95□□□□□ -1.46
SHE10YGL228W PPR1P07272 904 aaPredicted RBP5.95□□□□□ -1.46
SHE10YGL228W RME1P32338 300 aaKnown RBP5.95□□□□□ -1.46
SHE10YGL228W MUD1P32605 298 aaKnown RBP5.95□□□□□ -1.46
SHE10YGL228W EFM2P38347 419 aa5.95□□□□□ -1.46
SHE10YGL228W ORC5P50874 479 aa5.95□□□□□ -1.46
SHE10YGL228W ULP1Q02724 621 aa5.95□□□□□ -1.46
SHE10YGL228W YDR090CQ03193 310 aa5.95□□□□□ -1.46
SHE10YGL228W MSC2Q03455 724 aa5.95□□□□□ -1.46
SHE10YGL228W GIR2Q03768 265 aaPredicted RBP5.95□□□□□ -1.46
SHE10YGL228W SLX4Q12098 748 aa5.95□□□□□ -1.46
SHE10YGL228W YOR131CQ12486 218 aa5.95□□□□□ -1.46
SHE10YGL228W CDC11P32458 415 aa5.94□□□□□ -1.46
SHE10YGL228W KTR2P33550 425 aa5.94□□□□□ -1.46
SHE10YGL228W VPS35P34110 944 aa5.94□□□□□ -1.46
SHE10YGL228W GPT2P36148 743 aa5.94□□□□□ -1.46
SHE10YGL228W VID24P38263 362 aa5.94□□□□□ -1.46
SHE10YGL228W GUA1P38625 525 aaKnown RBP5.94□□□□□ -1.46
SHE10YGL228W SHQ1P40486 507 aaPredicted RBP5.94□□□□□ -1.46
SHE10YGL228W FIG4P42837 879 aa5.94□□□□□ -1.46
SHE10YGL228W CUL3P53202 744 aa5.94□□□□□ -1.46
SHE10YGL228W ERG5P54781 538 aa5.94□□□□□ -1.46
SHE10YGL228W UTP14Q04500 899 aaKnown RBP5.94□□□□□ -1.46
SHE10YGL228W DON1Q05610 365 aa5.94□□□□□ -1.46
SHE10YGL228W YLR297WQ05899 129 aa5.94□□□□□ -1.46
SHE10YGL228W YCG1Q06680 1035 aa5.94□□□□□ -1.46
SHE10YGL228W RLP24Q07915 199 aaKnown RBP5.94□□□□□ -1.46
SHE10YGL228W OSW2Q12202 724 aa5.94□□□□□ -1.46
SHE10YGL228W PDC6P26263 563 aaKnown RBP5.94□□□□□ -1.46
SHE10YGL228W ASN1P49089 572 aaKnown RBP5.94□□□□□ -1.46
SHE10YGL228W HSH155P49955 971 aaKnown RBP5.94□□□□□ -1.46
SHE10YGL228W MNP1P53163 194 aaPredicted RBP5.94□□□□□ -1.46
SHE10YGL228W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
SHE10YGL228W VPS72Q03388 795 aa5.94□□□□□ -1.46
SHE10YGL228W TRS130Q03660 1102 aa5.94□□□□□ -1.46
SHE10YGL228W VPS38Q05919 439 aa5.94□□□□□ -1.46
SHE10YGL228W CSR1Q06705 408 aaKnown RBP5.94□□□□□ -1.46
SHE10YGL228W MAM3Q12296 706 aa5.94□□□□□ -1.46
SHE10YGL228W YOL098CQ12496 1037 aa5.94□□□□□ -1.46
SHE10YGL228W SWI6P09959 803 aa5.93□□□□□ -1.46
SHE10YGL228W VMA1P17255 1071 aaKnown RBP5.93□□□□□ -1.46
SHE10YGL228W TMT1P32643 299 aa5.93□□□□□ -1.46
SHE10YGL228W SMC1P32908 1225 aa5.93□□□□□ -1.46
SHE10YGL228W NIP100P33420 868 aa5.93□□□□□ -1.46
SHE10YGL228W PIN4P34217 668 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
SHE10YGL228W CCC2P38995 1004 aa5.93□□□□□ -1.46
SHE10YGL228W SEC9P40357 651 aa5.93□□□□□ -1.46
SHE10YGL228W MMM1P41800 426 aa5.93□□□□□ -1.46
SHE10YGL228W MDM20Q12387 796 aaKnown RBP5.93□□□□□ -1.46
SHE10YGL228W YDL206WQ12424 762 aa5.93□□□□□ -1.46
SHE10YGL228W ZPS1Q12512 249 aa5.93□□□□□ -1.46
SHE10YGL228W RTP1Q12751 981 aa5.93□□□□□ -1.46
SHE10YGL228W RPL4AP10664 362 aaKnown RBP5.92□□□□□ -1.46
SHE10YGL228W MTF2P10849 440 aa5.92□□□□□ -1.46
SHE10YGL228W SNA3P14359 133 aa5.92□□□□□ -1.46
SHE10YGL228W IME1P21190 360 aa5.92□□□□□ -1.46
SHE10YGL228W SPC110P32380 944 aa5.92□□□□□ -1.46
SHE10YGL228W DPH2P32461 534 aa5.92□□□□□ -1.46
SHE10YGL228W KIC1P38692 1080 aa5.92□□□□□ -1.46
SHE10YGL228W NPP2P39997 493 aa5.92□□□□□ -1.46
SHE10YGL228W INP51P40559 946 aaKnown RBP5.92□□□□□ -1.46
SHE10YGL228W STU2P46675 888 aa5.92□□□□□ -1.46
SHE10YGL228W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
SHE10YGL228W RPL4BP49626 362 aaKnown RBP5.92□□□□□ -1.46
SHE10YGL228W VPS62P53285 467 aa5.92□□□□□ -1.46
SHE10YGL228W YPR078CQ06813 372 aa5.92□□□□□ -1.46
SHE10YGL228W SHS1Q07657 551 aa5.92□□□□□ -1.46
SHE10YGL228W NEW1Q08972 1196 aaKnown RBP5.92□□□□□ -1.46
SHE10YGL228W PLP2Q12017 286 aa5.92□□□□□ -1.46
SHE10YGL228W HIF1Q12373 385 aa5.92□□□□□ -1.46
SHE10YGL228W COX4P04037 155 aa5.91□□□□□ -1.46
SHE10YGL228W TOM70P07213 617 aaKnown RBP5.91□□□□□ -1.46
SHE10YGL228W WHI2P12611 486 aa5.91□□□□□ -1.46
SHE10YGL228W RAD57P25301 460 aa5.91□□□□□ -1.46
SHE10YGL228W MSS51P32335 436 aa5.91□□□□□ -1.46
SHE10YGL228W PAH1P32567 862 aa5.91□□□□□ -1.46
SHE10YGL228W RAD54P32863 898 aa5.91□□□□□ -1.46
SHE10YGL228W DUR3P33413 735 aa5.91□□□□□ -1.46
SHE10YGL228W STO1P34160 861 aaKnown RBP5.91□□□□□ -1.46
SHE10YGL228W SDS3P40505 327 aa5.91□□□□□ -1.46
SHE10YGL228W YAP5P40574 245 aa5.91□□□□□ -1.46
SHE10YGL228W COS5P47187 383 aa5.91□□□□□ -1.46
SHE10YGL228W ALF1P53904 254 aa5.91□□□□□ -1.46
SHE10YGL228W CEF1Q03654 590 aaPredicted RBP5.91□□□□□ -1.46
SHE10YGL228W YML020WQ03722 664 aa5.91□□□□□ -1.46
SHE10YGL228W ECM7Q06200 448 aa5.91□□□□□ -1.46
SHE10YGL228W YLR001CQ07895 862 aa5.91□□□□□ -1.46
SHE10YGL228W HFI1Q12060 488 aa5.91□□□□□ -1.46
SHE10YGL228W SEC23P15303 768 aaKnown RBP5.91□□□□□ -1.46
SHE10YGL228W PET123P17558 318 aa5.91□□□□□ -1.46
SHE10YGL228W JNM1P36224 373 aa5.91□□□□□ -1.46
SHE10YGL228W TVP23P38962 199 aa5.91□□□□□ -1.46
SHE10YGL228W SCD6P45978 349 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
SHE10YGL228W JJJ3P47138 172 aa5.91□□□□□ -1.46
SHE10YGL228W CLA4P48562 842 aa5.91□□□□□ -1.46
SHE10YGL228W TBF1Q02457 562 aa5.91□□□□□ -1.46
SHE10YGL228W CUS1Q02554 436 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms