RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeastyeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB1YMR296C TCD1P38756 429 aa12.52□□□□□ -0.4
LCB1YMR296C MIP6P38760 659 aaKnown RBP12.52□□□□□ -0.4
LCB1YMR296C SEC9P40357 651 aa12.52□□□□□ -0.4
LCB1YMR296C YFL040WP43562 540 aa12.52□□□□□ -0.4
LCB1YMR296C VTC2P43585 828 aa12.52□□□□□ -0.4
LCB1YMR296C VPS60Q03390 229 aa12.52□□□□□ -0.4
LCB1YMR296C ATG11Q12527 1178 aa12.52□□□□□ -0.4
LCB1YMR296C YDR524C-BQ3E6R4 66 aa12.52□□□□□ -0.4
LCB1YMR296C SNA3P14359 133 aa12.51□□□□□ -0.41
LCB1YMR296C MIP1P15801 1254 aa12.51□□□□□ -0.41
LCB1YMR296C SPO11P23179 398 aa12.51□□□□□ -0.41
LCB1YMR296C SUV3P32580 737 aa12.51□□□□□ -0.41
LCB1YMR296C FYV8P46949 817 aaKnown RBP12.51□□□□□ -0.41
LCB1YMR296C APT1P49435 187 aaKnown RBP12.51□□□□□ -0.41
LCB1YMR296C CAF130P53280 1122 aaPredicted RBP12.51□□□□□ -0.41
LCB1YMR296C ZPR1P53303 486 aaKnown RBP12.51□□□□□ -0.41
LCB1YMR296C VPS38Q05919 439 aa12.51□□□□□ -0.41
LCB1YMR296C GPI13Q07830 1017 aa12.51□□□□□ -0.41
LCB1YMR296C MCM16Q12262 181 aa12.51□□□□□ -0.41
LCB1YMR296C YOL098CQ12496 1037 aa12.51□□□□□ -0.41
LCB1YMR296C MOT1P32333 1867 aa12.51□□□□□ -0.41
LCB1YMR296C FOB1O13329 566 aa12.51□□□□□ -0.41
LCB1YMR296C PET111P08468 800 aa12.51□□□□□ -0.41
LCB1YMR296C SUP45P12385 437 aaKnown RBP12.51□□□□□ -0.41
LCB1YMR296C LTV1P34078 463 aa12.51□□□□□ -0.41
LCB1YMR296C STO1P34160 861 aaKnown RBP12.51□□□□□ -0.41
LCB1YMR296C RPC25P35718 212 aa12.51□□□□□ -0.41
LCB1YMR296C YEL025CP39991 1188 aa12.51□□□□□ -0.41
LCB1YMR296C VPS72Q03388 795 aa12.51□□□□□ -0.41
LCB1YMR296C YAP7Q08182 245 aa12.51□□□□□ -0.41
LCB1YMR296C HMI1Q12039 706 aa12.51□□□□□ -0.41
LCB1YMR296C HEM1P09950 548 aaPredicted RBP12.5□□□□□ -0.41
LCB1YMR296C UBC1P21734 215 aaKnown RBP12.5□□□□□ -0.41
LCB1YMR296C WHI3P34761 661 aaKnown RBP12.5□□□□□ -0.41
LCB1YMR296C CCC2P38995 1004 aa12.5□□□□□ -0.41
LCB1YMR296C PRP31P49704 494 aaPredicted RBP12.5□□□□□ -0.41
LCB1YMR296C HFM1P51979 1187 aa12.5□□□□□ -0.41
LCB1YMR296C ALF1P53904 254 aa12.5□□□□□ -0.41
LCB1YMR296C SVF1Q05515 481 aa12.5□□□□□ -0.41
LCB1YMR296C CLN3P13365 580 aa12.49□□□□□ -0.41
LCB1YMR296C ATG3P40344 310 aa12.49□□□□□ -0.41
LCB1YMR296C RRP6Q12149 733 aaKnown RBP12.49□□□□□ -0.41
LCB1YMR296C LDB19Q12502 818 aa12.49□□□□□ -0.41
LCB1YMR296C ISY1P21374 235 aaPredicted RBP12.48□□□□□ -0.41
LCB1YMR296C RME1P32338 300 aaKnown RBP12.48□□□□□ -0.41
LCB1YMR296C DUR3P33413 735 aa12.48□□□□□ -0.41
LCB1YMR296C CBK1P53894 756 aa12.48□□□□□ -0.41
LCB1YMR296C ERG5P54781 538 aa12.48□□□□□ -0.41
LCB1YMR296C YML020WQ03722 664 aa12.48□□□□□ -0.41
LCB1YMR296C CWC2Q12046 339 aaPredicted RBP12.48□□□□□ -0.41
LCB1YMR296C YKL091CP33324 310 aaKnown RBP12.48□□□□□ -0.41
LCB1YMR296C EFM2P38347 419 aa12.48□□□□□ -0.41
LCB1YMR296C CAJ1P39101 391 aa12.48□□□□□ -0.41
LCB1YMR296C FIS1P40515 155 aa12.48□□□□□ -0.41
LCB1YMR296C PSP2P50109 593 aaKnown RBP12.48□□□□□ -0.41
LCB1YMR296C MDR1P53258 950 aa12.48□□□□□ -0.41
LCB1YMR296C SMC6Q12749 1114 aa12.48□□□□□ -0.41
LCB1YMR296C YEL076C-AP0CX16 216 aa12.47□□□□□ -0.41
LCB1YMR296C YLR464WP0CX17 216 aa12.47□□□□□ -0.41
LCB1YMR296C SPO12P17123 173 aa12.47□□□□□ -0.41
LCB1YMR296C PRP22P24384 1145 aaKnown RBP12.47□□□□□ -0.41
LCB1YMR296C CDC48P25694 835 aaKnown RBP12.47□□□□□ -0.41
LCB1YMR296C YEL076CP39971 216 aa12.47□□□□□ -0.41
LCB1YMR296C AZR1P50080 613 aa12.47□□□□□ -0.41
LCB1YMR296C YLR287CQ05881 355 aa12.47□□□□□ -0.41
LCB1YMR296C VFA1P40080 203 aa12.46□□□□□ -0.41
LCB1YMR296C PGA2P53903 129 aa12.46□□□□□ -0.41
LCB1YMR296C UME1Q03010 460 aa12.46□□□□□ -0.41
LCB1YMR296C YLH47Q06493 454 aa12.46□□□□□ -0.41
LCB1YMR296C NCR1Q12200 1170 aa12.46□□□□□ -0.41
LCB1YMR296C STE11P23561 717 aa12.45□□□□□ -0.42
LCB1YMR296C SHQ1P40486 507 aaPredicted RBP12.45□□□□□ -0.42
LCB1YMR296C ULP2P40537 1034 aaPredicted RBP12.45□□□□□ -0.42
LCB1YMR296C SAD1P43589 448 aa12.45□□□□□ -0.42
LCB1YMR296C ROG3P43602 733 aa12.45□□□□□ -0.42
LCB1YMR296C FUS2Q05670 677 aa12.45□□□□□ -0.42
LCB1YMR296C SRD1P09007 221 aa12.45□□□□□ -0.42
LCB1YMR296C SEC23P15303 768 aaKnown RBP12.45□□□□□ -0.42
LCB1YMR296C OM45P16547 393 aa12.45□□□□□ -0.42
LCB1YMR296C AFT1P22149 690 aa12.45□□□□□ -0.42
LCB1YMR296C POT1P27796 417 aaKnown RBP RIP-Chip data12.45□□□□□ -0.42not detected
LCB1YMR296C IRE1P32361 1115 aa12.45□□□□□ -0.42
LCB1YMR296C AVT3P36062 692 aa12.45□□□□□ -0.42
LCB1YMR296C GRS1P38088 690 aaKnown RBP12.45□□□□□ -0.42
LCB1YMR296C DED1P06634 604 aaKnown RBP12.44□□□□□ -0.42
LCB1YMR296C MTF2P10849 440 aa12.44□□□□□ -0.42
LCB1YMR296C CKA2P19454 339 aa12.44□□□□□ -0.42
LCB1YMR296C SMY2P32909 740 aaKnown RBP12.44□□□□□ -0.42
LCB1YMR296C REI1P38344 393 aaPredicted RBP12.44□□□□□ -0.42
LCB1YMR296C BOP3P53958 396 aa12.44□□□□□ -0.42
LCB1YMR296C SPO75Q07798 868 aa12.44□□□□□ -0.42
LCB1YMR296C TVP23P38962 199 aa12.43□□□□□ -0.42
LCB1YMR296C INP51P40559 946 aaKnown RBP12.43□□□□□ -0.42
LCB1YMR296C SGM1P47166 707 aa12.43□□□□□ -0.42
LCB1YMR296C RRB1Q04225 511 aaKnown RBP12.43□□□□□ -0.42
LCB1YMR296C SML1Q04964 104 aa12.43□□□□□ -0.42
LCB1YMR296C NDC80P40460 691 aa12.42□□□□□ -0.42
LCB1YMR296C EFM4P40516 257 aa12.42□□□□□ -0.42
LCB1YMR296C HIP1P06775 603 aa12.42□□□□□ -0.42
LCB1YMR296C PPR1P07272 904 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 5,963 RNA–protein pairs in 108.5 ms