RNA–Protein interactions for RNA: YHR165C

PRP8, Transcript of Component of U4/U6-U5 snRNP complex, yeastyeast

Gene PRP8, Length 7,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP8YHR165C PPN1Q04119 674 aa2.94□□□□□ -1.94
PRP8YHR165C SXM1Q04175 944 aaKnown RBP2.94□□□□□ -1.94
PRP8YHR165C NOT5Q12514 560 aaPredicted RBP2.94□□□□□ -1.94
PRP8YHR165C TPI1P00942 248 aaKnown RBP2.94□□□□□ -1.94
PRP8YHR165C RPL19AP0CX82 189 aaKnown RBP2.94□□□□□ -1.94
PRP8YHR165C RPL19BP0CX83 189 aaPredicted RBP2.94□□□□□ -1.94
PRP8YHR165C MRPL8P22353 238 aa2.94□□□□□ -1.94
PRP8YHR165C PXA2P34230 853 aa2.94□□□□□ -1.94
PRP8YHR165C SAP190P36123 1033 aa2.94□□□□□ -1.94
PRP8YHR165C HXT5P38695 592 aa2.94□□□□□ -1.94
PRP8YHR165C EAF5P39995 279 aa2.94□□□□□ -1.94
PRP8YHR165C REF2P42073 533 aaPredicted RBP2.94□□□□□ -1.94
PRP8YHR165C RSC4Q02206 625 aa2.94□□□□□ -1.94
PRP8YHR165C YPL225WQ08971 146 aaKnown RBP2.94□□□□□ -1.94
PRP8YHR165C YPL150WQ12152 901 aa2.94□□□□□ -1.94
PRP8YHR165C LAT1P12695 482 aaKnown RBP2.94□□□□□ -1.94
PRP8YHR165C RPC31P17890 251 aa2.94□□□□□ -1.94
PRP8YHR165C YEL043WP32618 956 aa2.94□□□□□ -1.94
PRP8YHR165C PRM2P40534 656 aa2.94□□□□□ -1.94
PRP8YHR165C VPS4P52917 437 aa2.94□□□□□ -1.94
PRP8YHR165C VPS60Q03390 229 aa2.94□□□□□ -1.94
PRP8YHR165C RNH1Q04740 348 aa2.94□□□□□ -1.94
PRP8YHR165C ISW2Q08773 1120 aa2.94□□□□□ -1.94
PRP8YHR165C APL4Q12028 832 aa2.94□□□□□ -1.94
PRP8YHR165C CMC2Q3E7A4 109 aa2.94□□□□□ -1.94
PRP8YHR165C OLE1P21147 510 aaKnown RBP2.94□□□□□ -1.94
PRP8YHR165C UGA3P26370 528 aa2.94□□□□□ -1.94
PRP8YHR165C HOM6P31116 359 aaKnown RBP2.94□□□□□ -1.94
PRP8YHR165C RRP3P38712 501 aaKnown RBP2.94□□□□□ -1.94
PRP8YHR165C YHR122WP38829 231 aa2.94□□□□□ -1.94
PRP8YHR165C YDR089WP38966 869 aa2.94□□□□□ -1.94
PRP8YHR165C GEM1P39722 662 aa2.94□□□□□ -1.94
PRP8YHR165C GIP4P39732 760 aa2.94□□□□□ -1.94
PRP8YHR165C APT1P49435 187 aaKnown RBP2.94□□□□□ -1.94
PRP8YHR165C STB4P50104 949 aa2.94□□□□□ -1.94
PRP8YHR165C MON1P53129 644 aa2.94□□□□□ -1.94
PRP8YHR165C YGR016WP53209 190 aa2.94□□□□□ -1.94
PRP8YHR165C UBX4P54730 416 aa2.94□□□□□ -1.94
PRP8YHR165C HOS3Q02959 697 aaKnown RBP2.94□□□□□ -1.94
PRP8YHR165C YDR338CQ05497 695 aa2.94□□□□□ -1.94
PRP8YHR165C PSK2Q08217 1101 aa2.94□□□□□ -1.94
PRP8YHR165C SMC6Q12749 1114 aa2.94□□□□□ -1.94
PRP8YHR165C TIF3P34167 436 aaKnown RBP2.93□□□□□ -1.94
PRP8YHR165C NUP120P35729 1037 aa2.93□□□□□ -1.94
PRP8YHR165C LHS1P36016 881 aa2.93□□□□□ -1.94
PRP8YHR165C CST26P38226 397 aa2.93□□□□□ -1.94
PRP8YHR165C YHR020WP38708 688 aaKnown RBP2.93□□□□□ -1.94
PRP8YHR165C YJL107CP42947 387 aa2.93□□□□□ -1.94
PRP8YHR165C ALD4P46367 519 aaKnown RBP2.93□□□□□ -1.94
PRP8YHR165C YGR111WP53265 400 aa2.93□□□□□ -1.94
PRP8YHR165C SSK1Q07084 712 aa2.93□□□□□ -1.94
PRP8YHR165C MNL2Q12205 849 aa2.93□□□□□ -1.94
PRP8YHR165C PRP6P19735 899 aaPredicted RBP2.93□□□□□ -1.94
PRP8YHR165C SCJ1P25303 377 aa2.93□□□□□ -1.94
PRP8YHR165C ARE1P25628 610 aa2.93□□□□□ -1.94
PRP8YHR165C BRF1P29056 596 aa2.93□□□□□ -1.94
PRP8YHR165C RAD54P32863 898 aa2.93□□□□□ -1.94
PRP8YHR165C DUT1P33317 147 aa2.93□□□□□ -1.94
PRP8YHR165C RDH54P38086 958 aa2.93□□□□□ -1.94
PRP8YHR165C MGS1P40151 587 aa2.93□□□□□ -1.94
PRP8YHR165C PHB1P40961 287 aa2.93□□□□□ -1.94
PRP8YHR165C NDE2Q07500 545 aa2.93□□□□□ -1.94
PRP8YHR165C YLL058WQ12198 575 aa2.93□□□□□ -1.94
PRP8YHR165C WIP1Q2V2P8 89 aa2.93□□□□□ -1.94
PRP8YHR165C TRP5P00931 707 aaKnown RBP2.93□□□□□ -1.94
PRP8YHR165C XRS2P33301 854 aa2.93□□□□□ -1.94
PRP8YHR165C OAF3P36023 863 aa2.93□□□□□ -1.94
PRP8YHR165C EFM2P38347 419 aa2.93□□□□□ -1.94
PRP8YHR165C PEX18P38855 283 aa2.93□□□□□ -1.94
PRP8YHR165C YTA12P40341 825 aa2.93□□□□□ -1.94
PRP8YHR165C FET4P40988 552 aa2.93□□□□□ -1.94
PRP8YHR165C ATF2P53296 535 aa2.93□□□□□ -1.94
PRP8YHR165C NSE3Q05541 303 aa2.93□□□□□ -1.94
PRP8YHR165C YOR378WQ08902 515 aa2.93□□□□□ -1.94
PRP8YHR165C YOR214CQ12282 236 aa2.93□□□□□ -1.94
PRP8YHR165C YRF1-2P40105 1681 aa2.93□□□□□ -1.94
PRP8YHR165C CBP4P37267 147 aa2.93□□□□□ -1.94
PRP8YHR165C NAS2P40555 220 aa2.93□□□□□ -1.94
PRP8YHR165C PEX8P53248 589 aa2.93□□□□□ -1.94
PRP8YHR165C TGL2P54857 326 aa2.93□□□□□ -1.94
PRP8YHR165C MUM3Q08750 479 aa2.93□□□□□ -1.94
PRP8YHR165C NMD4Q12129 218 aa2.93□□□□□ -1.94
PRP8YHR165C SPO21Q12411 609 aa2.93□□□□□ -1.94
PRP8YHR165C TY1B-AO13527 1196 aaKnown RBP2.93□□□□□ -1.94
PRP8YHR165C URA1P28272 314 aaPredicted RBP2.93□□□□□ -1.94
PRP8YHR165C AAR2P32357 355 aaPredicted RBP2.93□□□□□ -1.94
PRP8YHR165C MRE11P32829 692 aa2.93□□□□□ -1.94
PRP8YHR165C YAP3P38749 330 aa2.93□□□□□ -1.94
PRP8YHR165C URB2P47108 1174 aa2.93□□□□□ -1.94
PRP8YHR165C CDC123Q05791 360 aa2.93□□□□□ -1.94
PRP8YHR165C ATG20Q07528 640 aa2.93□□□□□ -1.94
PRP8YHR165C IFM1P25038 676 aa2.93□□□□□ -1.94
PRP8YHR165C SDS22P36047 338 aa2.93□□□□□ -1.94
PRP8YHR165C BUB1P41695 1021 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
PRP8YHR165C NOP9P47077 666 aaKnown RBP2.93□□□□□ -1.94
PRP8YHR165C ECM23Q02710 187 aa2.93□□□□□ -1.94
PRP8YHR165C ADE13Q05911 482 aaKnown RBP2.93□□□□□ -1.94
PRP8YHR165C PEP5P12868 1029 aa2.92□□□□□ -1.94
PRP8YHR165C COX15P40086 486 aa2.92□□□□□ -1.94
PRP8YHR165C MAL13P53338 473 aa2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms