RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	DCS1	Q06151	350 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	FAP7	Q12055	197 aa	Predicted RBP	4.39	□□□□□ -1.71
PIM1	YBL022C	TAF3	Q12297	353 aa		4.39	□□□□□ -1.71
PIM1	YBL022C	SUI3	P09064	285 aa	Known RBP	4.38	□□□□□ -1.71
PIM1	YBL022C	CLN3	P13365	580 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	PRP4	P20053	465 aa	Known RBP	4.38	□□□□□ -1.71
PIM1	YBL022C	YEL1	P34225	687 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	KES1	P35844	434 aa	Known RBP	4.38	□□□□□ -1.71
PIM1	YBL022C	YKL222C	P35995	705 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	SET3	P36124	751 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	PGM2	P37012	569 aa	Known RBP	4.38	□□□□□ -1.71
PIM1	YBL022C	APD1	P38281	316 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	RMD1	Q03441	430 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	FMN1	Q03778	218 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	ATG13	Q06628	738 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	NOP12	Q08208	459 aa	Known RBP	4.38	□□□□□ -1.71
PIM1	YBL022C	MSH5	Q12175	901 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	CDC6	P09119	513 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	YAK1	P14680	807 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	AFG2	P32794	780 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	STE13	P33894	931 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	MNN2	P38069	597 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	BRL1	P38770	471 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	LYS14	P40971	790 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	VTC2	P43585	828 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	ATP22	P50273	684 aa	Predicted RBP	4.38	□□□□□ -1.71
PIM1	YBL022C	ERP6	P53198	216 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	HEH2	Q03281	663 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	SCM3	Q12334	223 aa		4.38	□□□□□ -1.71
PIM1	YBL022C	POL3	P15436	1097 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	MRE11	P32829	692 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
PIM1	YBL022C	YJR054W	P47114	497 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	CDC8	P00572	216 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	MRP7	P12687	371 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	PEP5	P12868	1029 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	NIP100	P33420	868 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	CTM1	P38818	585 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	MAD1	P40957	749 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	FMS1	P50264	508 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	ZPR1	P53303	486 aa	Known RBP	4.37	□□□□□ -1.71
PIM1	YBL022C	ALD6	P54115	500 aa	Known RBP	4.37	□□□□□ -1.71
PIM1	YBL022C	SWP1	Q02795	286 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	URH1	Q04179	340 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	HCA4	P20448	770 aa	Known RBP	4.37	□□□□□ -1.71
PIM1	YBL022C	GSY1	P23337	708 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	KIP1	P28742	1111 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	SEC20	P28791	383 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	YBR242W	P38331	238 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	ERG7	P38604	731 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	SPC72	P39723	622 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	KAP123	P40069	1113 aa	Known RBP	4.37	□□□□□ -1.71
PIM1	YBL022C	INA22	P40576	216 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	HKR1	P41809	1802 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	BIR1	P47134	954 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	RPM2	Q02773	1202 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	AAD16	Q02895	342 aa		4.37	□□□□□ -1.71
PIM1	YBL022C	EBS1	Q03466	884 aa	Known RBP	4.37	□□□□□ -1.71
PIM1	YBL022C	ERB1	Q04660	807 aa	Known RBP	4.37	□□□□□ -1.71
PIM1	YBL022C	MOT1	P32333	1867 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	DCD1	P06773	312 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	RPB2	P08518	1224 aa	Known RBP	4.36	□□□□□ -1.71
PIM1	YBL022C	RSR1	P13856	272 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	GFA1	P14742	717 aa	Known RBP	4.36	□□□□□ -1.71
PIM1	YBL022C	TPM1	P17536	199 aa	Known RBP	4.36	□□□□□ -1.71
PIM1	YBL022C	CNA1	P23287	553 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	DPB2	P24482	689 aa	Predicted RBP	4.36	□□□□□ -1.71
PIM1	YBL022C	CLG1	P35190	452 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	PPS1	P38148	807 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
PIM1	YBL022C	FCY21	P40039	528 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	MSN5	P52918	1224 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	MEC3	Q02574	474 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	RRP6	Q12149	733 aa	Known RBP	4.36	□□□□□ -1.71
PIM1	YBL022C	TRM11	Q12463	433 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	SIN4	P32259	974 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	HIR1	P32479	840 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	PFF1	P38244	976 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	UBP12	P39538	1254 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	MKT1	P40850	830 aa	Known RBP	4.36	□□□□□ -1.71
PIM1	YBL022C	NMD5	P46970	1048 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	DSL1	P53847	754 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	SNX3	Q08826	162 aa	Known RBP	4.36	□□□□□ -1.71
PIM1	YBL022C	YOL098C	Q12496	1037 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	PGK1	P00560	416 aa	Known RBP	4.36	□□□□□ -1.71
PIM1	YBL022C	AIM21	P40563	679 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	UBP6	P43593	499 aa	Known RBP	4.36	□□□□□ -1.71
PIM1	YBL022C	RFX1	P48743	811 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	SOV1	Q04748	898 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	HEL2	Q05580	639 aa	Known RBP	4.36	□□□□□ -1.71
PIM1	YBL022C	ECI1	Q05871	280 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	OPY2	Q06810	360 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	YOL075C	Q08234	1294 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	DAS2	Q12084	232 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	YAH1	Q12184	172 aa	Known RBP	4.36	□□□□□ -1.71
PIM1	YBL022C	GLE1	Q12315	538 aa		4.36	□□□□□ -1.71
PIM1	YBL022C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
PIM1	YBL022C	SBP1	P10080	294 aa	Known RBP	4.35	□□□□□ -1.71
PIM1	YBL022C	PRI1	P10363	409 aa		4.35	□□□□□ -1.71
PIM1	YBL022C	MTF2	P10849	440 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 201.6 ms