RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C SEC5P89102 971 aa9.22□□□□□ -0.93
SRP54YPR088C CDC37P06101 506 aaKnown RBP9.21□□□□□ -0.93
SRP54YPR088C PFK1P16861 987 aaKnown RBP9.21□□□□□ -0.93
SRP54YPR088C PRP22P24384 1145 aaKnown RBP9.21□□□□□ -0.93
SRP54YPR088C SEC8P32855 1065 aa9.21□□□□□ -0.93
SRP54YPR088C DMA1P38823 416 aa9.21□□□□□ -0.93
SRP54YPR088C LSC2P53312 427 aa9.21□□□□□ -0.93
SRP54YPR088C MRC1P25588 1096 aa9.2□□□□□ -0.94
SRP54YPR088C PSO2P30620 661 aa9.2□□□□□ -0.94
SRP54YPR088C YKL091CP33324 310 aaKnown RBP9.2□□□□□ -0.94
SRP54YPR088C MOT2P34909 587 aaKnown RBP9.2□□□□□ -0.94
SRP54YPR088C PPS1P38148 807 aa9.2□□□□□ -0.94
SRP54YPR088C REG2P38232 338 aa9.2□□□□□ -0.94
SRP54YPR088C AIP1P46680 615 aaKnown RBP9.2□□□□□ -0.94
SRP54YPR088C ZPR1P53303 486 aaKnown RBP9.2□□□□□ -0.94
SRP54YPR088C SLD5Q03406 294 aa9.2□□□□□ -0.94
SRP54YPR088C EBS1Q03466 884 aaKnown RBP9.2□□□□□ -0.94
SRP54YPR088C CRD1Q07560 283 aa9.2□□□□□ -0.94
SRP54YPR088C OM45P16547 393 aa9.2□□□□□ -0.94
SRP54YPR088C SAP190P36123 1033 aa9.2□□□□□ -0.94
SRP54YPR088C ETP1P38748 585 aaKnown RBP9.2□□□□□ -0.94
SRP54YPR088C HMF1P40037 129 aaKnown RBP9.2□□□□□ -0.94
SRP54YPR088C FIS1P40515 155 aa9.2□□□□□ -0.94
SRP54YPR088C ULP2P40537 1034 aaPredicted RBP9.2□□□□□ -0.94
SRP54YPR088C YGL039WP53183 348 aaKnown RBP9.2□□□□□ -0.94
SRP54YPR088C DUS4Q06063 367 aa9.2□□□□□ -0.94
SRP54YPR088C YET1P35723 206 aa9.19□□□□□ -0.94
SRP54YPR088C MGA2P40578 1113 aa9.19□□□□□ -0.94
SRP54YPR088C UBP15P50101 1230 aa9.19□□□□□ -0.94
SRP54YPR088C CYC8P14922 966 aa9.18□□□□□ -0.94
SRP54YPR088C DBP7P36120 742 aaKnown RBP9.18□□□□□ -0.94
SRP54YPR088C RPN3P40016 523 aaKnown RBP9.18□□□□□ -0.94
SRP54YPR088C HUL4P40985 892 aa9.18□□□□□ -0.94
SRP54YPR088C YFL034WP43564 1073 aa9.18□□□□□ -0.94
SRP54YPR088C VPS75P53853 264 aa9.18□□□□□ -0.94
SRP54YPR088C YOL075CQ08234 1294 aa9.18□□□□□ -0.94
SRP54YPR088C TCO89Q08921 799 aa9.18□□□□□ -0.94
SRP54YPR088C TIF6Q12522 245 aaKnown RBP9.18□□□□□ -0.94
SRP54YPR088C MAK16P10962 306 aaPredicted RBP9.17□□□□□ -0.94
SRP54YPR088C TCP1P12612 559 aaKnown RBP9.17□□□□□ -0.94
SRP54YPR088C TFC4P33339 1025 aa9.17□□□□□ -0.94
SRP54YPR088C TVP38P36164 337 aa9.17□□□□□ -0.94
SRP54YPR088C CTM1P38818 585 aa9.17□□□□□ -0.94
SRP54YPR088C SVF1Q05515 481 aa9.17□□□□□ -0.94
SRP54YPR088C YDL057WQ07379 328 aa9.17□□□□□ -0.94
SRP54YPR088C YPL216WQ08964 1102 aa9.17□□□□□ -0.94
SRP54YPR088C PHO13P19881 312 aa9.16□□□□□ -0.94
SRP54YPR088C MSH3P25336 1018 aa9.16□□□□□ -0.94
SRP54YPR088C PGM2P37012 569 aaKnown RBP9.16□□□□□ -0.94
SRP54YPR088C BIM1P40013 344 aa9.16□□□□□ -0.94
SRP54YPR088C FYV8P46949 817 aaKnown RBP9.16□□□□□ -0.94
SRP54YPR088C ATG1P53104 897 aa9.16□□□□□ -0.94
SRP54YPR088C COG4Q06096 861 aa9.16□□□□□ -0.94
SRP54YPR088C YAP7Q08182 245 aa9.16□□□□□ -0.94
SRP54YPR088C TOM1Q03280 3268 aa9.16□□□□□ -0.94
SRP54YPR088C PDC1P06169 563 aaKnown RBP9.16□□□□□ -0.94
SRP54YPR088C PCK1P10963 549 aa9.16□□□□□ -0.94
SRP54YPR088C RGT1P32862 1170 aa9.16□□□□□ -0.94
SRP54YPR088C SPT8P38915 602 aa9.16□□□□□ -0.94
SRP54YPR088C TOS3P43637 560 aa9.16□□□□□ -0.94
SRP54YPR088C NBP1P52919 319 aaPredicted RBP9.16□□□□□ -0.94
SRP54YPR088C VID30P53076 958 aa9.16□□□□□ -0.94
SRP54YPR088C NCS2P53923 493 aaPredicted RBP9.16□□□□□ -0.94
SRP54YPR088C YLR225CQ05948 407 aaKnown RBP9.16□□□□□ -0.94
SRP54YPR088C MSC6Q08818 692 aaKnown RBP9.16□□□□□ -0.94
SRP54YPR088C YPL277CQ08989 487 aa9.16□□□□□ -0.94
SRP54YPR088C SPO11P23179 398 aa9.15□□□□□ -0.94
SRP54YPR088C MRF1P30775 413 aaPredicted RBP9.15□□□□□ -0.94
SRP54YPR088C PXL1P36166 706 aa9.15□□□□□ -0.94
SRP54YPR088C MIP6P38760 659 aaKnown RBP9.15□□□□□ -0.94
SRP54YPR088C MXR1P40029 184 aa9.15□□□□□ -0.94
SRP54YPR088C TOF1P53840 1238 aa9.15□□□□□ -0.94
SRP54YPR088C YMR321CQ04898 105 aa9.15□□□□□ -0.94
SRP54YPR088C CUR1Q06469 252 aa9.15□□□□□ -0.94
SRP54YPR088C MED1Q12321 566 aa9.15□□□□□ -0.94
SRP54YPR088C DAL7P21826 554 aa9.14□□□□□ -0.95
SRP54YPR088C CDC48P25694 835 aaKnown RBP9.14□□□□□ -0.95
SRP54YPR088C ATG19P35193 415 aa9.14□□□□□ -0.95
SRP54YPR088C SHM1P37292 490 aaPredicted RBP9.14□□□□□ -0.95
SRP54YPR088C UBP13P38187 747 aa9.14□□□□□ -0.95
SRP54YPR088C VPS53P47061 822 aa9.14□□□□□ -0.95
SRP54YPR088C ARK1P53974 638 aa9.14□□□□□ -0.95
SRP54YPR088C TRM11Q12463 433 aa9.14□□□□□ -0.95
SRP54YPR088C RPS6AP0CX37 236 aaKnown RBP9.13□□□□□ -0.95
SRP54YPR088C RPS6BP0CX38 236 aaPredicted RBP9.13□□□□□ -0.95
SRP54YPR088C DBP5P20449 482 aaKnown RBP9.13□□□□□ -0.95
SRP54YPR088C YUR1P26725 428 aa9.13□□□□□ -0.95
SRP54YPR088C TRK2P28584 889 aa9.13□□□□□ -0.95
SRP54YPR088C SEC65P29478 273 aa9.13□□□□□ -0.95
SRP54YPR088C SPC110P32380 944 aa9.13□□□□□ -0.95
SRP54YPR088C YEL025CP39991 1188 aa9.13□□□□□ -0.95
SRP54YPR088C STR2P47164 639 aa9.13□□□□□ -0.95
SRP54YPR088C SMC5Q08204 1093 aa9.13□□□□□ -0.95
SRP54YPR088C MET7Q08645 548 aa9.13□□□□□ -0.95
SRP54YPR088C RPC53P25441 422 aa9.13□□□□□ -0.95
SRP54YPR088C UBP5P39944 805 aa9.13□□□□□ -0.95
SRP54YPR088C CCM1P48237 864 aaPredicted RBP9.13□□□□□ -0.95
SRP54YPR088C MDR1P53258 950 aa9.13□□□□□ -0.95
SRP54YPR088C SPO75Q07798 868 aa9.13□□□□□ -0.95
SRP54YPR088C PHO8P11491 566 aa9.12□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 109.8 ms