RNA–Protein interactions for RNA: YPR057W

BRR1, Transcript of snRNP protein component of spliceosomal snRNPs, yeastyeast

Gene BRR1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR1YPR057W MAK16P10962 306 aaPredicted RBP10.32□□□□□ -0.76
BRR1YPR057W SUP45P12385 437 aaKnown RBP10.32□□□□□ -0.76
BRR1YPR057W PRP22P24384 1145 aaKnown RBP10.32□□□□□ -0.76
BRR1YPR057W SUV3P32580 737 aa10.32□□□□□ -0.76
BRR1YPR057W MCR1P36060 302 aaKnown RBP10.32□□□□□ -0.76
BRR1YPR057W YIL089WP40500 205 aa10.32□□□□□ -0.76
BRR1YPR057W NET1P47035 1189 aa10.32□□□□□ -0.76
BRR1YPR057W PTA1Q01329 785 aaPredicted RBP10.32□□□□□ -0.76
BRR1YPR057W COG4Q06096 861 aa10.32□□□□□ -0.76
BRR1YPR057W TCO89Q08921 799 aa10.32□□□□□ -0.76
BRR1YPR057W RKM4Q12504 494 aa10.32□□□□□ -0.76
BRR1YPR057W PGK1P00560 416 aaKnown RBP10.31□□□□□ -0.76
BRR1YPR057W CLN3P13365 580 aa10.31□□□□□ -0.76
BRR1YPR057W UTR4P32626 227 aa10.31□□□□□ -0.76
BRR1YPR057W LEO1P38439 464 aa10.31□□□□□ -0.76
BRR1YPR057W BIM1P40013 344 aa10.31□□□□□ -0.76
BRR1YPR057W YFL034WP43564 1073 aa10.31□□□□□ -0.76
BRR1YPR057W TOS3P43637 560 aa10.31□□□□□ -0.76
BRR1YPR057W JSN1P47135 1091 aaKnown RBP RIP-Chip data10.31□□□□□ -0.76not detected
BRR1YPR057W DUS3Q06053 668 aaKnown RBP10.31□□□□□ -0.76
BRR1YPR057W YDL057WQ07379 328 aa10.31□□□□□ -0.76
BRR1YPR057W ISA1Q07821 250 aaPredicted RBP10.31□□□□□ -0.76
BRR1YPR057W HMI1Q12039 706 aa10.31□□□□□ -0.76
BRR1YPR057W VMA2P16140 517 aaKnown RBP10.3□□□□□ -0.76
BRR1YPR057W CLB5P30283 435 aa10.3□□□□□ -0.76
BRR1YPR057W SHP1P34223 423 aa10.3□□□□□ -0.76
BRR1YPR057W RPC25P35718 212 aa10.3□□□□□ -0.76
BRR1YPR057W MCD4P36051 919 aa10.3□□□□□ -0.76
BRR1YPR057W PCH2P38126 564 aa10.3□□□□□ -0.76
BRR1YPR057W EFM2P38347 419 aa10.3□□□□□ -0.76
BRR1YPR057W ULP2P40537 1034 aaPredicted RBP10.3□□□□□ -0.76
BRR1YPR057W PEX21P50091 288 aa10.3□□□□□ -0.76
BRR1YPR057W HFM1P51979 1187 aa10.3□□□□□ -0.76
BRR1YPR057W ATG9Q12142 997 aa10.3□□□□□ -0.76
BRR1YPR057W RPC53P25441 422 aa10.29□□□□□ -0.76
BRR1YPR057W PCS60P38137 543 aaKnown RBP RIP-Chip data10.29□□□□□ -0.76 RIP-Chip
BRR1YPR057W GPB2P39717 880 aa10.29□□□□□ -0.76
BRR1YPR057W FIS1P40515 155 aa10.29□□□□□ -0.76
BRR1YPR057W OSW7P43611 510 aa10.29□□□□□ -0.76
BRR1YPR057W CTR1P49573 406 aa10.29□□□□□ -0.76
BRR1YPR057W NBP1P52919 319 aaPredicted RBP10.29□□□□□ -0.76
BRR1YPR057W ALF1P53904 254 aa10.29□□□□□ -0.76
BRR1YPR057W YLR287CQ05881 355 aa10.29□□□□□ -0.76
BRR1YPR057W VPS38Q05919 439 aa10.29□□□□□ -0.76
BRR1YPR057W SPO75Q07798 868 aa10.29□□□□□ -0.76
BRR1YPR057W YPL277CQ08989 487 aa10.29□□□□□ -0.76
BRR1YPR057W MED1Q12321 566 aa10.29□□□□□ -0.76
BRR1YPR057W CDC60P26637 1090 aaKnown RBP10.28□□□□□ -0.76
BRR1YPR057W UBP5P39944 805 aa10.28□□□□□ -0.76
BRR1YPR057W YCK3P39962 524 aa10.28□□□□□ -0.76
BRR1YPR057W VFA1P40080 203 aa10.28□□□□□ -0.76
BRR1YPR057W VID30P53076 958 aa10.28□□□□□ -0.76
BRR1YPR057W YAF9P53930 226 aa10.28□□□□□ -0.76
BRR1YPR057W CRD1Q07560 283 aa10.28□□□□□ -0.76
BRR1YPR057W CWC2Q12046 339 aaPredicted RBP10.28□□□□□ -0.76
BRR1YPR057W CFT2Q12102 859 aaPredicted RBP10.28□□□□□ -0.76
BRR1YPR057W RRP6Q12149 733 aaKnown RBP10.28□□□□□ -0.76
BRR1YPR057W CDC19P00549 500 aaKnown RBP10.27□□□□□ -0.77
BRR1YPR057W PCK1P10963 549 aa10.27□□□□□ -0.77
BRR1YPR057W DAL7P21826 554 aa10.27□□□□□ -0.77
BRR1YPR057W RRP43P25359 394 aaPredicted RBP10.27□□□□□ -0.77
BRR1YPR057W TRK2P28584 889 aa10.27□□□□□ -0.77
BRR1YPR057W PGM2P37012 569 aaKnown RBP10.27□□□□□ -0.77
BRR1YPR057W RPN3P40016 523 aaKnown RBP10.27□□□□□ -0.77
BRR1YPR057W YGL039WP53183 348 aaKnown RBP10.27□□□□□ -0.77
BRR1YPR057W YGR125WP53273 1036 aa10.27□□□□□ -0.77
BRR1YPR057W ZPR1P53303 486 aaKnown RBP10.27□□□□□ -0.77
BRR1YPR057W PLP2Q12017 286 aa10.27□□□□□ -0.77
BRR1YPR057W SSB1P11484 613 aaKnown RBP10.26□□□□□ -0.77
BRR1YPR057W TCP1P12612 559 aaKnown RBP10.26□□□□□ -0.77
BRR1YPR057W APL1P27351 700 aa10.26□□□□□ -0.77
BRR1YPR057W MRF1P30775 413 aaPredicted RBP10.26□□□□□ -0.77
BRR1YPR057W SSB2P40150 613 aaKnown RBP10.26□□□□□ -0.77
BRR1YPR057W HUL5P53119 910 aa10.26□□□□□ -0.77
BRR1YPR057W TOF1P53840 1238 aa10.26□□□□□ -0.77
BRR1YPR057W ERG5P54781 538 aa10.26□□□□□ -0.77
BRR1YPR057W HOS3Q02959 697 aaKnown RBP10.26□□□□□ -0.77
BRR1YPR057W CUR1Q06469 252 aa10.26□□□□□ -0.77
BRR1YPR057W NEW1Q08972 1196 aaKnown RBP10.26□□□□□ -0.77
BRR1YPR057W ERP3Q12403 225 aa10.26□□□□□ -0.77
BRR1YPR057W SPO12P17123 173 aa10.25□□□□□ -0.77
BRR1YPR057W SSA4P22202 642 aaKnown RBP10.25□□□□□ -0.77
BRR1YPR057W TKL1P23254 680 aaKnown RBP10.25□□□□□ -0.77
BRR1YPR057W PKC1P24583 1151 aa10.25□□□□□ -0.77
BRR1YPR057W EUG1P32474 517 aa10.25□□□□□ -0.77
BRR1YPR057W CCC2P38995 1004 aa10.25□□□□□ -0.77
BRR1YPR057W ATG3P40344 310 aa10.25□□□□□ -0.77
BRR1YPR057W NCS2P53923 493 aaPredicted RBP10.25□□□□□ -0.77
BRR1YPR057W ARK1P53974 638 aa10.25□□□□□ -0.77
BRR1YPR057W UME1Q03010 460 aa10.25□□□□□ -0.77
BRR1YPR057W SEC23P15303 768 aaKnown RBP10.24□□□□□ -0.77
BRR1YPR057W UBP13P38187 747 aa10.24□□□□□ -0.77
BRR1YPR057W REG2P38232 338 aa10.24□□□□□ -0.77
BRR1YPR057W VPS29P38759 282 aa10.24□□□□□ -0.77
BRR1YPR057W HMF1P40037 129 aaKnown RBP10.24□□□□□ -0.77
BRR1YPR057W SHQ1P40486 507 aaPredicted RBP10.24□□□□□ -0.77
BRR1YPR057W YAP5P40574 245 aa10.24□□□□□ -0.77
BRR1YPR057W CCM1P48237 864 aaPredicted RBP10.24□□□□□ -0.77
BRR1YPR057W APT1P49435 187 aaKnown RBP10.24□□□□□ -0.77
BRR1YPR057W UBP15P50101 1230 aa10.24□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms